w- llllilllllllllllllllllllllllllllllll 3 1293 01055 3331 This is to certify that the thesis entitled GENETIC PARAMETERS FOR PARTITIONED USES OF ENERGY INTAKE ESTIMATED FROM FIELD COLLECTED AND CALORIMETRIC DATA ON THE SAME LACTATING HOLSTEIN CONS presented by PETER MALACHI SAAMA has been accepted towards fulfillment of the requirements for M.S. degree in Animal Science %> 1’ Major professor Dateflé 1/ ”22 0-7639 MS U is an Affirmative Action/Equal Opportunity Institution L: In a: my ‘1. a :1o‘-;: :7 g “t 1“- ‘1‘ H ’3’: f Midis-vii ~ g» a a of“: P? TM? M 1".l 263“ J" r ‘1" __ HM PLACE IN RETURN BOX to remove this checkout from your record. TOAVODFINESMJmonorbdonddodm. MSU I. An Namath/o Action/Equal Opponmuy lndltution owns-9.1 GMC PARAMETERS FOR PARTITIONED USES OF ENERGY INTAKE FSTINIATED FROM FIELD COLLECTED AND CALORIMETRIC DATA ON THE SAME LACTATING HOLSTEIN COWS BY PETERMALACHI SAAMA ATHFSIS Submitted to Michigan State University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Department of Animal Science 1992 ABSTRACT GENETIC PARAMETERS FOR PARTITIONED USES OF ENERGY INTAKE ESTIMATED FROM FIELD COLLECTED AND CALORIMETRIC DATA ON THE SAME LACTATING HOLSTEIN COWS By Peter Malachi Saama Energy balance trials were conducted on 34 multiparous Holstein cows at the University of New Hampshire, Durham, at wk 6, 10, and 14 postpartum during 19804985. Diet, parity, and season effects were found to be non-significant sources of variation in gross energy consumed, fecal, urinary, methane, heat, milk, and maintenance energy, and tissue energy balance and their ratios. Milk energy as a covariate was highly significant in these variables except energy for heat production and that for maintenance. The effect of maintenance interacted with periods. Field estimates on gross efficiency were obtained from intake and production data recorded during wk 5, 7, 9, 11, 13, and 15 postpartum. All energy and gross efficiency estimates from field data closely approximated measures of the same traits from energy chamber data. This approximation was better at postpeak lactation. An additional data set of 37 cows was procured from energy balance trials conducted during 1987-1989. Animal models were used to estimate partial energy requirements and genetic parameters for energy usage traits. Estimation and prediction was by a derivative-free REML algorithm. Omitting animal effects did not affect solutions for covariates. Genetic and phenotypic variations and heritability estimates in energy intake variables, at postpeak lactation, were similar for chamber and field data. DEDICATION To Beatrice Mary Namuyomba and Cyprian Kikunyi Bamwoze ACKNOWLEDGIVIENTS The author is grateful to Dr I.L. Mao for his friendship, guidance and counsel. Dr. T.A. Ferris, Dr. R.S. Emery, and Dr. J.L. Gill are cited for their instructive insights during the course of this work. The encouragement provided by Dr. M. C. Dong, Dr. J. Jensen, Dr. G. Jeon, Dr. L. Gustavo, Ms. T. Moore, Ms. F. Ngwerume, Dr. D. Krogmeier, Ms. G. Ferreira, and Mr. F. Grignola is greatly appreciated. Extreme gratitude is extended to Dr. J.B. Holter for his critical review of the manuscript and to F. J. Janicki and H. H. Hayes for their contributions to collection of energy data. TABLE OF CONTENTS List of Tables ....................................... vii List of Figures ...................................... ix 1 Introduction ...................................... 1 2 Objectives ....................................... 4 3 Review of literature .................................. 5 3.1 Dietary sources of energy and fiber. ...................... 5 3.2 Protein ...................................... 5 3.2.1 Carbohydrate ................................. 6 3.2.2 Lipid ...................................... 7 3.3 Energy metabolism ................................. 8 3.3.1 Energy partitioning by indirect-calorimetry ............... 10 3.3.2 Energy use for maintenance ........................ 12 3.3.2.1 Sources of variation in maintenance energy ............ 13 3.3.2.2 Efficiency of energy utilization for maintenance ......... 13 3.3.2.3 Estimation of maintenance energy .................. 14 3.3.2.4 Genetic aspects of maintenance energy ............... 16 3.3.3 Energy use for milk production ...................... 16 3.3.3.1 Sources of variation in milk energy ................. 17 3.3.3.2 Efficiency of energy utilization for milk .............. 17 3.3.3.3 Estimation of milk energy ....................... 18 3.3.3.4 Genetic aspects of milk energy .................... 19 3.3.4 FJIergy use for live weight gain or loss ................. 20 3.4 Canonical correlation analysis. .......................... 20 3.5 (Co)variance component estimation. ...................... 21 3.5.1 ML estimates of (co)variance components ................ 22 3.5.2 REML estimates of (co)variance components .............. 23 3.5.2.1 Derivative-free type REML algorithms ............... 24 3.5.2.2 Limitations of DF-type algorithms .................. 25 4 Sources of variation in partitioned uses of energy intake in pluriparous lactating Holstein cows in energy chamber .................... 26 4.1 Abstract ....................................... 26 4.2 Introduction ..................................... 26 4.3 Materials and methods ............................... 28 4.3.1 Experimental procedure and data ..................... 28 4.3.2 Model and analysis algorithm ....................... 29 4.4 Results and discussion ............................... 30 4.5 Conclusions ..................................... 37 5 Energy intake and gross efficiency comparisons from calorimetric and field data on the Same lactating Cows ......................... 39 5.1 Abstract ....................................... 39 5.2 Introduction ..................................... 40 5.3 Materials and methods ............................... 41 5.3.1 Experimental design and data ....................... 41 5.3.2 Analysis procedures ............................. 42 5.4 Results and discussion ............................... 43 5.5 Conclusions ..................................... 52 6 Comparisons of genetic parameters for energy intake estimated from energy chamber and from field collected data on the same lactating cows ..... 53 6.1 Abstract ....................................... 53 6.2 Introduction ..................................... 54 6.3 Materials and methods ............................... 56 6.3.1 Experimental procedure and data ..................... 56 6.3.2 Estimation of genetic parameters ..................... 57 6.3.3 Estimation of partial energetic efficiency ................. 59 6.4 Results and discussion ............................... 60 6.4.1 Genetic and phenotypic variation ..................... 60 6.4.2 Genetic and phenotypic correlations .................... 61 6.4.3 Partial energy requirements ......................... 63 6.5 Conclusions ..................................... 66 7 Summary ........................................ 68 8 Appendices ....................................... 70 9 References ....................................... 96 Table 1. Table 2. Table 3. Table 4. Table 5. Table 6. Table 7. Table 8. Table 9. Table 10. Table 11. LIST OF TABLES The effect of body weight on heat production ............. 15 Within period mean, SE, SD, and CV for energy measures (n = 34) by selected weeks postpartum (pp) .............. 32 Overall and within period mean, SE, SD, and CV for energy measures (11 = 34) by selected weeks postpartum (pp) ........ 34 Critical levels (P - value) for main effects and partial regression coefficients for covariates from within period model: energy partition measures .............................. 35 Critical levels (P - value) for main effects and partial regression coefficients for covariates from within period model: energy efficiency measures ............................. 36 Overall mean, SE, SD and CV for energy measures from energy chamber and from field data on the same 30 pluriparous Holstein cows in early lactation ........................... 44 Mean, SE, SD and CV of energy measures from energy chamber and estimates from field data on the same 30 pluriparous Holstein cows in early lactation ........................... 44 Overall mean, SE, SD and CV for efficiency measures from energy chamber and estimates from field data on the same 30 pluriparous Holstein cows in early lactation ...................... 46 Mean, SE, SD and CV for efficiency measures from energy chamber and estimates from field data on the same 30 pluriparous Holstein cows in early lactation ...................... 47 Product-moment correlations between field and energy chamber measures of energy intake from data on the same 30 pluriparous Holstein cows in early lactation; values in parentheses are rank correlations .................................. 48 Product-moment correlations between field and energy chamber measures of energy efficiency from data on the same 30 pluriparous Holstein cows in early lactation; values in parentheses are rank correlations .................................. 49 vii Table 12. Table 13. Table 14. Table 15. Table 16. Table 17. Canonical roots and correlations (R2,) between field and calorimetric energy intake measures on the same 30 lactating cows at wk 6, 10 and 14 postpartum .............................. 51 Canonical roots and correlations (R2,) between field and calorimetric gross efficiency measures on the same 30 lactating cows at wk 6, 10, and 14 postpartum ............................. 51 Additive genetic and phenotypic SD and heritability for energy measures traits at peak lactation ...................... 61 Estimates of phenotypic correlations (above diagonal) and genetic correlations (below diagonal) between energy utilization traits . . . 62 Partial regression coefficients (Coeff.) for covariates in animal models at peak and postpeak lactation ....................... 65 Partial regression coefficients (Coeff.) for covariates in multiple regression models at peak and poku lactation ........... 65 viii Figure 1. Figure 2. Figure 3. Figure 4. LIST OF FIGURES Framework of energy metabolism in the lactating dairy cow ...... 9 General principle of open circuit apparutus ................. 11 Overall mean percentages for partitioning of energy intake ....... 31 Lactation curve for 30 pluriparous Holstein cows ............. 45 1 INTRODUCTION The main purpose of raising livestock is to convert feeds into food products desirable to humans. The animal industry plays a major role in maximizing food for human consumption from the available feedstuffs and other inputs. The nutrients or resources that are needed for an animal to achieve its potential have been described. Emmans and Oldham (1988) suggest that a number of functions will become important when resources and nutrients are limiting. They are: l) maintenance of essential metabolic processes and tissue integrity; 2) maintenance of established pregnancy; 3) maximal rate of secretion of milk constituents as determined by genotype, stage of lactation, and perhaps age and parity; 4) achievement of an upper limit to body protein mass at a particular stage of maturity; 5) achievement of a desired fat mass in relation to protein mass or stage of maturity. High peak milk yields and an extension of the high yield phase of lactation are occurring in dairy cattle due to continued improvements in genetics, adoption of new management and feed systems, and biotechnological advances. Nutrient requirements of the cow increase with milk yield (NRC, 1989). During early lactation, cows are often in negative energy and N balance because maximal DMI does not occur until peak milk production. Therefore, cows mobilize energy and protein from body tissue to support milk production. Energy and amino acids are the two nutritional factors most likely to limit milk production. The relationship between N and energy requirements for cows is complex because there 2 are two requirments to be met: one for the host animal and another for the ruminal microbes. The ultimate goal of any animal related agricultural enterprise is to provide the most acceptable, properly balanced, and least expensive ration that can be fed to a given species of animals. This is so because the provision of feed to animals constitues a major component of farm expenditure. Since all of the organic nutrients contained in a feed can serve as a source of energy, a measure of energy value of a feed is desirable. Several attempts at defining an over-all energy unit of measurement which is easily determined, accurate and readily reproducible have been made and continue to be made by scientists in the US and elsewhere. Four different methods are used in the US to determined the useful energy of livestock feeds. They are the determination of total digestible nutients, digestible energy, metabolizable energy, and net energy. Net energy is the most scientifically acceptable method of expressing the energy value of a feed (Moe and Tyrrell, 1973). Whence, the energy value of a feed is defined as the increase in energy retention which occurs per unit increment of a feed given. In this study, ”efficiency“ is defined as the ratio of energy in the product to the product of energy partitioning from which it was formed. Efficiency of energy use and energy requirements have been identified more precisely. Progressively more intensive experimentation has described physiological and biochemical bases for an ever increasing body of knowledge concerning variation in energy use. In most cases, the laboratory techniques are too expensive or impractical to be used on a routine basis. In the long run, methods to predict quantities of nutrients absorbed from the gut will permit a more flexible and accurate method of evaluating diets, predicting animal performance and estimating the genetic potential for animal feed and energetic efficiency. In general, there are two ways in which the net energy value of feed may be estimated: a) by regression of total energy balance on DMI, and b) by assuming a maintenance requirement in terms of either energy intake or energy balance and either subtracting the metabolizable energy requirement for maintenance from the actual metabolizable energy intake or adding the net energy required for maintenance to the actual energy balance (Moe and Tyrrell, 1972). Whenever either of these approaches is used, it is important to ask how accurate the approximations are and whether this accuracy holds in other production conditions. An initial attempt to address these issues was made by Walter and Mao ( 1989) when they compared estimates of energy requirements from barn data with reported values. Consequently, the use of field collected data to predict enery requirements of dairy cattle was considered a plausible source of data for generating databases for quantititative analyses. However verifieation of this assertion has not been made. This study represents an unprecedented effort at making comparisons of various measures energy utilization and energetic efficiency as well as genetic parameter estimates for energy intake from field collected and energy chamber data on the same COWS. 2 OBJECTIVES 1) To examine sources of variation in partitioned uses of energy intake using energy chamber data. 2) To compare energy intake and gross efficiency measures from calorimetric and field data on the same pluriparous lactating cows. 3) To compare genetic parameters for energy intake traits estimated from respiration chamber data and field data on the same primiparous lactating COWS. 3 REVIEW OF LITERATURE 3.1 Dietary sources of energy and fiber Adequate dietary energy and fiber are essential for high producing dairy cows during early lactation. The three main dietary sources of energy and fiber are protein, carbohydrate, and lipid. 3.2 Protein Adequate intake of protein is nwded to provide the proper amount of total protein to the small intestine for digestion and absorption. Due to limited body reserves (Andrew, 1990), protein deficient diets quickly influence the nutritional and productive status of cows in early lactation (Wohlt, 1978' ; Wohlt, 1978”). The quantity and quality of amino acids reaching the small intestine are the result of microbial synthesis in the rumen and the extent to which feed proteins escape ruminal degradation. However, the amount of protein supplied by microbial synthesis in the rumen is not adequate to meet the needs of high producing cows (NRC, 1989). In lieu of this, dietary undegradable protein (UIP) is often required (Satter, 1986; Robinson, 1991). Milk yield responses to increasing the UIP content of rations have been observed (Cardoniga, 1988; Rogers, 1987); however, the amino acid profile of by- pass protein must be of high quality, supplying required nutrients (Satter, 1986; Susmel, 1989). Effects of supplemental fat and UIP on milk yield were additive 6 (Ferguson, 1988; Wolht, 1991; Wilks, 1991). Fish meal has been reported to be less degradable in the rumen than soybean meal (Sniffen, 1987; Atwal, 1992). 3.2.1 Carbohydrate Carbohydrates are the major components in plant tissues and they comprise up to 50% of the dry matter in forages, although higher concentrations (up to 80%) may be found in some seeds, especially cereal grains (Church, 1982). The primary function of carbohydrates in animal nutrition is to serve as a source of energy for normal life processes. Type of dietary carbohydrate and level of carbohydrate intake are factors which often determine level of performance of lactating dairy cattle. Forages that are high in digestibility and that can be consumed in large amounts are an essential diet component for high producing dairy cattle. Alfalfa is a widely used source of energy, fiber, and protein for dairy cows. The high solubility and degradability of alfalfa protein, however, may result in N wastage in the rumen. Additional sources of feed protein, a portion of which will pass out of the rumen undegraded, may be necessary to supplement the protein in alfalfa forage. Increasing dietary crude protein (CP) levels from 13.8% to 17.5% by the use of cottonseed meal (CSM) was beneficial to cows consuming alfalfa-based diets in early lactation (Grings, 1991). Because of its oil content, whole cotton seed (W CS) his considered a high energy ingredient. Feeding WCS supplements increased yields (Anderson, 1979) and resulted in higher milk fat percentage (DePeters, 1985) but depressed milk protein percentage (Smith, 1981; DePeters, 1985). Increased grain in the diet has been shown to be responsible for an increase in milk production (Hoffman, 1991; Kesler, 1962), higher protein percentage (Y ousef, 1970). Nonetheless, some studies have shown a decrease in milk fat percentage as grain increases (Donker, 1982; Macleod, 1983). Increasing energy in diets using cereal grain supplements necessitates greater reductions in forage levels than if supplemental fat is fed. However, production response to added fat primarily depends on the nature of the diet, form of added fat, and availability of the fat to the rumen microbes and to the animal postruminally (Chalupa, 1986; Jenkins, 1982). 3.2.2 Lipid Energy requirements at peak lactation exceed the energy intake thus creating a deficit. Consequently feeding supplemental fat is utilized as a means of increasing the ration energy density. Feeding supplemental fat increased milk yield (Hoffman, 1991; Palmquist, 1978). Cows fed supplemental fat also had higher BW, and weight gain was significant with time (Hoffman, 1991). Dietary fat supplements increase the energy density of the diet as well as total tract apparent digestion of N (Ohaj uruka, 1991) but dietary fats can have a negative impact on milk protein (DePeters, 1987), rumen fermentation and fiber digestibility (Palmquist, 1978; Palmquist, 1980). Thus, fat supplements must be relatively inert in the rumen to reduce these detrimental effects (Ferretti, 1990). Calcium salts of long-chain fatty acids (Ca-LCFA) of palm-oil are chemically 8 bound dietary fats that do not adversely affect rumen fermentation (Chalupa, 1986) or fiber digestibility (Schauff, 1989) in lactating cows. Strategic feeding of regimens including use of Ca-LCFA (Kent, 1988; Schneider, 1988) have been used as a method to alleviate a portion of the dietary energy deficit experienced by early postpartum dairy cows (Bauman, 1980; Coppock, 1985). The net energy of Ca-LCFA from palm- oil has been determined in mature holstein cows (Andrew, 1990) . 3.3 Energy metabolism Dietary energy can be partitioned several ways. The flow of energy in the lactating cow, as described by NRC (1989) is shown in Figure 1. Intake of dietary energy is the gross energy (GE) of the food consumed. A substantial portion of GE is lost from the animal as fecal energy (FE) and the difference (GE-FE) is termed the apparent digestible energy (DE). Portions of the DE are voided as urinary energy (UE) and gaseous energy in the form of methane (CH). The remainder of GE-FE- UE is metabolizable energy (ME). An increase in heat production (HP) following consumption of food is termed heat increment (HI) and includes heat of fermentation, heat of product formation, thermal regulation, waste formation and excretion, voluntary activity, and basal metabolism. The difference (ME-HI) is net energy (NE). The NE can be recovered as a useful product such as maintenance (MNT), milk energy (MKE), body gain or loss, and conceptus energy (CE). What is left over is termed tissue energy balance (EB). This bioenergetics framework can be expanded to include many of the intermediate steps of metabolism involved and each component 9 can be divided into component parts. For example the ability of the food consumed to meet the NE requirement for maintenance is expressed as NE... It is important to recognize that dietary energy is not used with equal efficiency for all physiological functions. Approximate ranges for the efficiency use of ME are described by Moe et a1. (1973). GROSS ENERGY - Fecal Bury 1 DIGESTIBLE ENERGY Urinary Energy ' Methane energy 7 METABOLIZABLE ENERGY -[ ...2::. ] NET ENERGY Body gala ENERGY lam-«J -l 2.... Figure l . Framework of energy metabolism in the lactating dairy cow. 10 3.3.1 Energy partitioning by indirect-calorimetry Many techniques used to study energy metabolism have been discussed in detail recently by Blaxter (1989). In general, measurement of the overall energy transformations in an animal in terms of free energy is not possible for technical reasons. Therefore, measurements of energy exchanges in dairy cattle are made simply in terms of the changes in heat on complete oxidation. The heat produced in oxidation of food is measured by techniques of calorimetry. The heat of combution of food, whether in vitro or in vivo, is carried out by the technique of calorimetry. For instance, the heat of combustion of food is carried out by adiabatic bomb calorimetry. The method of indirect calorimetry (Bursztein, 1989) provides a unique process by which the type and rate of subtrate oxidation and heat production are measured in vivo starting from gaseous exchange measurements. The use of gas exchange for indirect calorimetry is based on assumptions that go back to the investigations of Lavoisier in the late 18th century (Holmes, 1985). The standard gas equations are reviewed by Bursztein (1989). These gas equations treat 02 and CD; as ideal gases. Johnson (1980) argues that this is incorrect for O2 and N2, but is only partially true for C02, thus introducing a small error. A more important potential error is related to water vapor, where the expired air is assumed to be saturated and complete drying is required for use of the gas equations, although neither of these conditions may be totally correct. Respiration apparatus for indirect calorimetry are of two main types: open circuit and closed circuit. In the open circuit respiration apparatus, outdoor air is passed through the ll chamber of the instrument and the changes in its oxygen, methane and carbon dioxide content are measured. The total amounts of carbon dioxide and methane produced and of oxygen consumed can be determined if the amount of air which passes through the apparatus and the incremental changes in gas concentrations are known (or fixed). The general principle of an open circuit apparatus is illustrated in Figure 2. Outdoor air flows through the ANIMAL CHAMBER —0 All AIR 9—- chamber, a sample of it SPIROIIETER A being taken continuously Figure 2. General principle of open circuit apparutus (Blaxter, and stored in 1989). the spirometer A. The flow through the chamber is measured and sample is taken and stored in spirometer B. A further sample is deflected through an absorption system to determine the proportion of C02 and CIL. Analyses of the air samples in the gas meter provide a measure of the O2 consumption. Formulae for performing routine calculations of respiration trial data in dairy cattle have been presented (Flatt, 1961). In the closed circuit system (Blaxter, 1989), air is circulated continuously through absorbents which remove carbon dioxide and water vapor; the air frwd of these gases returns to the chamber. A fall in the pressure in the whole apparatus occurs as a 12 result of the absorption of oxygen by the animal, and oxygen admitted to the system in proportion to this fall in pressure. By weighing the absorbents, the amount of carbon dioxide produced can be measured directly, and the amount of oxygen can be measured either by weight or volume. Technical problems with closed circuit systems, as discussed by Wainman and Blaxter (1958), present some practical difficulties. Implementation of indirect calorimetry apparutus by Armsby (1904), Ritzman and Benedict (1929), Ritzman and Colovos (1932), Mitchell et a1. (1932), Kleiber (1936), USDA-ARS, as described by Flatt et al. ( 1958), and others has provided a more complete and scientifically sound basis of feed evaluation as well as a more thorough knowledge of the energy requirements of dairy cattle and a basic understanding of factors affecting the energy metabolism of dairy cattle. 3.3.2 Energy use for maintenance The cow has certain obligatory needs for nutrients, which by definition must be met to maintain life and functional processes. The partitioning of nutrients to various body tissues involves two types of regulation, homeostatis and homeorhesis (Bauman and Currie 1980). Homeostatic control involves maintenance of physiological equillibrium or constant conditions in the internal environment. This includes regulation to maintain constancy of body temperature (Kennedy, 1967) and the intake of food and partitioning of nutrients in the absorptive and postabsorptive periods (Tepperman and Tepperman, 1970). The co-ordination of metabolism in various tissues to support a physiological state, such as pregnancy, is under homeorhetic 13 control (Kennedy, 1967). The informative study by Mertz and Van den Bergh (1977) illustrates the relationship between homeostasis and homeorhesis. 3.3.2.1 Sources of variation in maintenance energy Ritzman and Benedict (1938) found that the basal metabolism of their cows was rather variable. Brouwer, et a1. (1961) found evidence for variation in the maintenance requirement per 500 kg of BW of a cow. Significant variation exists in the maintenance requirement of animals when comparisons are made across a range of species and ages (Reid, 1974; Reid et al., 1980). This includes differences due to type of diet and physiological state, which are known to affect maintainenance requirements (Garrett and Johnson, 1983). Significant effects of breed, breed size, age, and feeding level on maintenance were observed by Taylor et a1. (1986). 3.3.2.2 Efficiency of energy utilization for maintenance The efficiency of ME use for maintenance (k_) and for gain (19) are related to the source of ME. Studies in which steam volatile fatty acids, glucose and protein were given as the sole energy source, suggest that k. is in the range of 80-85%, is constant for widely different foods and is predicatable from physiological experiments in which the end products of fermentation have been given as the sole source of energy (Blaxter, 1961). These results supported the conclusion of Ritzman and Benedict (1938) from earlier calorimetric studies. However, Blaxter and Wainman (1964) observed that k. was not constant, but appeared to increase with the feed quality. 14 Van Es and Nijkamp (1969) reported similar results from 41 balance trials with lactating cows consuming mixed diets of concentrate, silage, and variable amounts of hay. More recently, Blaxter and Boyne (1978) reported that k_ is affected by types of feed. 3.3.2.3 Estimation of maintenance energy In animal calorimetry, heat production attributable to maintenance metabolism can be distinguished from HI by measuring the fasting heat production (FHP). The total heat produced less FHP would be considered as HI (Holter, 1974). There are several ways of estimating k... Brody’s ( 1945) scaling of energy maintenance to BW'73 subsequently rounded by Kleiber (1965) to a scaling of BW.", as useful estimate of FHP has gained widespread use. According to NRC (1989), k., was calculated as .086 Meal/kg” of BW. Tablel, from the results of Van Karnpen (1987), shows that in animals with the same metabolic level or with equal amounts of heat produced per kg BW'”, there is a positive relationship between BW and HP expressed per animal. However, expressing HP/ kg BW results in a negative relationship. 15 TABLE 1. The effect of body weight on heat production. Body Weight HP/animal HP/kg BW I-IP/m2 HP/kg BW'” _ kg _ k] .1 89 890 4134 500 1 500 500 5000 500 10 2810 281 6050 500 100 15810 158 7327 500 1000 88915 89 8871 500 Generally, k. is estimated by measuring fasting metabolism or by regressing EB on ME (Moe and Tyrrell, 1973). In the latter case, the intercept is taken as k.I but is expressed in production units (NEmJ. Summarizing 332 energy balance trials, Moe et a1. (1972) reported a maintenance requirement of 73 kcal NEfl/kg BW”. National Research Council (1989) uses 80 kcal NEmm/kg BW'” for maintenance taking into account usual physical actitivity of cows. With respect to fasting metabolism of dry cows, Holter (1976) reported 103.4j;2.8 kcang BW-7’ 98.6i3.5 kcal/kg BW” at l and 31 days after lactation, respectively, while Flatt et al. (1965) observed a fasting metabolic rate of 73.5 kcal/kg BW-7‘ in dry cows. There seems to be little agreement concerning the maintenance requirement of lactating cows. It has been assumed (Moe and Tyrrell, 1973; Tyrrell and Moe, 1972) that FHP in cattle numerically is greater than NE“, determined by regression procedure. 16 3.3.2.4 Genetic aspects for maintenance energy Taylor et a1. (1986) have discussed the role of genetics in influencing efficiency of maintenance requirements per unit metabolic body weight (MBW); estimated by BW'”. They computed a coefficient of phenotypic variation in MNT of 6.4% and a repeatability of .70 for 2-year periods. Van Es (1961) obtained an estimate of among- cow coefficient of variation of 4-8% (in dry cows) and 5-10% (dairy cows and steers) in 237 energy balance trials that he reviewed. The results of Andersen (1980) showed within-breed variation in maintenance requirements for beef bulls. A heritability of .31 was calculated from these data. Taylor et al. (1986) suggested genetic differences in maintenance requirement may be due largely to genetic differences in HI. In agreement with this postulate, Vercoe (1970) found that genetic differences in level of production require different k. to convert NE.“ to ME for maintenance (MEfl). Davey et a1. (1983) concluded the maintenance requirement of cows was not influenced by genetic merit for milk production. 3.3.3 Energy use for milk production The utilization of energy for milk yield has major economic implications. Energy sources making up ME can influence the product of energy partitioning. Flatt et a1. (1969) observed that MKE increased and tissue energy decreased, as alfalfa was substituted for concentrate. Tyrrell et a1. (1973) noted a shifl in NE from tissue deposition to MKE as equal feed-energy increments were changed from corn to beet- l7 pulp. 3.3.3.1 Sources of variation in milk energy Bauman (1985) indicated, based on literature, that little variation exists among animals in the efficiency with which MB is utilized for milk. A slight increase in efficiency of ME use for milk production was attributable to metabolizability of the diet (Van Es and Nijkamp, 1969). Extensive analyses by Moe (1981) of results from energy balance trials performed by Flatt et a1. (1969) showed that 1) use of ME for milk or body tissue gain was unaffected by milk yield, amount of body tissue gain (or loss), and stage of lactation; 2) variation among cow was due to the amount of feed consumed. However, an equal digestible DM produced more milk from white clover than from ryegrass (Rogers et al., 1979). Other sources of variation in k. have been observed. Kirchgessner et a1. (1982) found that kl increased as frequency of fwding increased. The influence of cold temperatures on the energy requirement of lactating cows was minimal (NRC, 1989). This was attributed to the high HP at high feed intakes. Hooven et a1. (1968) found that BW change increased as kI increased. 3.3.3.2 Efficiency of energy utilization for milk Energy utilization for milk is primarily a function of digestibility (Waldo and Jorgensen, 1981). Van Es and Nijkamp (1969) found no effects of percentage of crude fiber or of crude protein on efficiency of milk production. They concluded that 18 ME was used for milk production (k.) with and efficiency of 54-58% . Walter and Mao (1989) has summarized the reported partial efficiencies for lactation and observed a range of 54-75%. Multiple regression analyses were used by Moe et al. (1970) and Moe et a1. ( 1971) to derive partial efficiencies for milk production. Partial efficiency of ME for milk were 61-64%. Hashizume et a1. (1965) found k, of 74 and 82% for low and high concentrate diets. Calorimetric studies (Armstrong et a1. , 1964; Flatt et al., 1965; Moe et al., 1972) have shown that lactating cows, use DE or ME for milk production with a similar degree of efficiency. 3.3.3.3 Estimation of milk energy The NE requirement for milk (NE) is defined as the energy contained in the milk produced (NRC, 1989). The Gaines (1928) equation proposed the use of 4% fat- corrected milk as a measure of NE. The inadequacies of this procedure became evident with dietary regimens (Iaben, 1963; Van Soest, 1963) aimed at producing lower fat and a higher solids-not-fat (SNF) concentration. The landmark analysis (Tyrrell and Reid, 1965) of 21 different combinations of milk components demonstrated that the most practical equation for the accurate prediction of energy in milk was: Energy (kcal/kg) = 41.84 (% fat) + 22.29 (% SNF) - 25.58. In an effort to correct on the basis of SNF, solid-corrected milk (SCM) was computed as: SCM (kg) = 12.3 (kg fat) + 6.56 (kg SNF) - .0752 (kg Milk). 19 The SCM equation has been used widely to predict energy in milk (Walter and Mac, 1989; Ngwerume and Mac, 1992) with a high degree of accuracy. NRC (1989) computed NE as: NE, (Mcal/kg of milk) = .3512 + [.0962 (% fat)]. 3.3.3.4 Genetic aspects of milk energy There is a lack of studies in the literature on the genetic parameters of milk energy due to the following reasons: 1) the number of animals in respiration chambers and energy balance studies was too small, and equipment and labor was too expensive to extend these studies; 2) the studies were carried out mainly by nutritionists who are mostly interested in using uniform animals. In this regard, another caveat is that most studies of genetic differences between animals have focused on the genetic relationship between milk yield and feed efficiency (Custodio et al., 1983; Grieve et al., 1976; Wilmink, 1987). For this reason, present knowledge of genetic parameters for milk energy is limited. There is a unanimous agreement, in the literature, that direct selection on gross feed efficiency has no advantage because of the high correlation between gross feed efficiency and milk yield (Buttazoni and Mao, 1989; Custodio et al., 1983; Grieve et al., 1976; Freeman, 1967; Korver, 1988). Variation between animals in appetite, digestion, nutrient absorption, maintenance requirement, utilization of ME for MKE, nutrient partitioning and output composition makes gross feed efficiency an imprecise measure of efficiency. 20 3.3.4 Energy use for live weight gain or loss Because production of milk during lactation has a high priority in the dairy cow, production of milk may continue to be high despite insufficient DMI. In such situations, the animal must mobilize body tissue to compensate for the energy deficit. On the other hand, excessive intake of energy during late lactation and the dry period can cause BW gain (Morrow, 1976). The composition of the BW gain or loss is important in determining kI (Garrett, 1980). Some extensive reviews discuss manipulation of growth (Elsley, 1976), energy use for growth (Millward, 1976), and ‘ nutrition and genetic effects on body composition (Lister, 1976). Moe et a1. (1971) caution that live weight change alone may not provide an accurate measure of EB. Partial efficiency of ME for body gain (or loss) was 75% (Moe et a1. 1970; Moe et a1. 1971). Thorbek (1970) found partial efficiencies for protein and fat deposition of 43 and 77%. Protein-deficient diets shifted energy deposition from protein to fat (Black, 1974). 3.4 Canonical correlation analysis It often happens that we make measurements on several variables. Collectively these variables make up a multivariate system which may be divided a priori into two sets, with each set relating to a particular component of the system and with some idea required of the association between these components. For example, we may take 12 measurements relating to the yield of alfalfa (e. g.height, dry weight, number of leaves) at each of 1: sites in a region, and, at the same time, we may have recorded q 21 variables relating to the weather conditions at each of these sites (e.g. average daily rainfall, humidity, hours of sunshine). The whole system thus consists of n units on each of which (p + q ) variables have been measured. The overall (p + q)x(p + q) correlation matrix contains all information on associations between pairs of variables in the system, but attempting to extract from this matrix some idea of the association between the two sets of variables is a difficult task. This is because the correlations between the sets may not have a consistent pattern, and these between set correlations must in any case be adjusted somehow for the within-set correlations. Hotelling (1936) proposed the method of canonical correlation which derives a measure of maximum correlation between linear combinations of the original sets of variables. A rigorous derivation of the canonical correlation model may be found in Anderson (1958). A derivation of computing procedures for canonical correlation used in this project is outlined in Appendix V. 3.5 (Co)variance component estimation The basis for estimating variance components was established by Fisher (1925); that basis being: equate quadratic forms in the observation vector to their expected values and thereby construct a set of equations with unknown parameters the vector of variance components to be estimated. Whence, the method yields equations linear in the variance components that can be solved and the solutions taken as the estimates but this method was confined to balanced data. In genetic studies, the data are unbalanced. Henderson (1953) extended the 22 knowledge of estimation of components of variance to unbalanced data with his Methods 1, II, and III. Method 1, which computes sums of squares in the standard analysis of variance (ANOVA) with balanced data, equates the mean squares to their expectations and solves for the components, has been used extensively but cannot be used on mixed models. Method II is unbiased by fixed effects. It adjusts for fixed effects (in models having no interaction between fixed and random factors), estimated as if random effects were fixed, then estimates components as in Method I, using the adjusted data. These two methods enabled substantial analyses to be performed. Method III yields estimates of components of variance that are unbiased by fixed effects and their interactions and has contributed relatively more to animal breeding applications. However, the order in which reductions in sums of squares are computed is noteworthy. Reductions in sums of squares using a full model minus reductions in sums of squares from reduced models are equated to their expectations and solved for components. Computing these reductions and their expectations may be difficult for large data sets. Hence other approaches such as the method of maximum likelihood (ML) have been preferred. 3.5.1 ML estimates of (co)variance components The ML method was applied to the general mixed model by Hartley and Rao (1967). The scope of ML estimation for the estimation of variance components has been reviewed by Edwards (1961) and Harville (1977). In general, for a given staitistical model, parameters 0 to be estimated, and assumed distribution of the data, 23 the likelihood function L(6) can be derived. The ML estimates are the numerical values of the parameters for which L(6) attains its maximum. Maximizing the likelihood leads to estimates that are functions of sufficient statistics, universally most powerful, consistent, asymptotically normal, and often efficient. Large computational requirements restrict the use of ML for estimating variance components. Inherent to ML are some undesirable properties. The first is that the distribution of the data, usually a multivariate normal distribution, is assumed known. Secondly, ML estimators are biased as fixed effects in the model of analysis are treated as if they were known. This bias can be reduced by considering only the part of [(0) which is independent of the fixed effects (Patterson and Thompson, 1971) and hence invariant of the loeation parameter. The latter approach is referred to as restricted maximum likelihood (REML). Under normality the REML estimation is equivalent to both minimum norm quadratic unbiased estimation (MINQUE; Rao, 1971') and local - minimum variance quadratic estimation (MIVQUE; Rao, 1971"). Other properties of REML are discussed by Harville (1977). 3.5.2 REML estimates of (co)variance components Interest in estimation of (co)variance components by REML procedures has increased in recent years since REML: 1) yields estimates less affected by selection bias than Henderson’s ( 1953) Methods 1, II and III (Schaeffer, 1979); 2) allows for estimation of genetic parameters after consideration of information on all relatives (Meyer, 1986) without knowledge of true variance covariance components; 3) is 24 computationally feasible. Several REML algorithms have been used (Meyer, 1990) but most of these are iterative, often leading to repeated re-ordering of the mixed model equations (MME). For instance, the expectation maximization (EM-REML) algorithm requires inversion of the mixed model matrix (MMM), and utilizes information on first or second derivatives in order to obtain estimates that maximize L(O) . An alternative algorithm which avoids explicit evaluation of first derivatives is the derivative free (DF) algorithm (Graser ct al., 1987; Meyer, 1986) generally referred to as derivative-free restricted maximum likelihood (DP-REML). 3.5.2.1 Derivative-free type REML algorithms The best linear unbiased prediction (BLUP) method (Henderson, 1973) has rapidly become the method of choice for genetic evaluation of animals. The notion of utilizing the numerator relationship matrix in the analysis of BLUP under an animal model (AM) was presented by Henderson (1952). In the AM the order of the ME often exceeds the number of records making inversion of the M impractical. Use of DF-REML has become excwdingly attractive with the widespread use of the AM. The application of BLUP to multiple traits was described by Henderson and Quass (1976). The inclusion of maternal effects and presentation of the reduced animal model were made by Quass and Pollak (1980). The approach of DFREML is suitable for AM including additional random components (Meyer, 1991). The use of a direct sparse matrix solver to obtain L(6) can reduce cental processing unit (CPU) time per round of a DP algorithm (Boldman and Van Vleck, 1991). Recently, a 25 method to approximate sampling variances and confidence intervals for individual parameters in a multi-parameter analysis has been described (Meyer and Hill, 1991). 3.5.2.2 Limitations of DF-type algorithms The maximum value of [,(e) in DF-type algorithms has less significant digits than the maximized function. This condition could lead to false maxima, especially for multilple traits and when correlations are high (Misztal, 1992). Hence, the method of DF-REML , like EM-REML, does not guarantee identification of global maxima in the presence of local maxima. Groenveld and Kovac (1990), using a small data set, explored if multiple solutions could be generated for a multivariate mixed model estimating six covariance components by a DF-type algorithm. Multiple solutions from the DF algorithm suggested existence of local maxima. However, the DF-type algorithm was superior to all other algoritrns considered in that study. In terms of CPU time it was faster by a factor of 22 misidentifying only one solution instead of 2 as EM-REML did. 4 Sources of Variation in Partitioned Uses of Energy Intake in Pluriparous Lactating Holstein Cows in Energy Chamber 4.1 ABSTRACT Data were energy chamber measures on 34 multiparous Holstein cows collected during wk 6, 10, and 14 postpartum. For each period, cows were placed in digestion stalls for a six-day excreta collection followed by two consecutive ll-h methane and heat production measurements. Energy partition averages coincided with conventional values. Sources of variation among cows in gross energy consumed, feeal, urinary, methane, heat, milk, and maintenance energy, and tissue energy balance were analyzed. Also analyzed were heat production, energy balance, milk energy, maintenance energy expressed in ratios to various energy intake measures. A within- period model containing fixed effects of treatment, parity, season, and covariates for maintenance and milk energy was used. Neither diet, parity, nor season effects was found to be a significant source of variation in all the variables. Milk energy as a covariate was highly significant in all variables except energy for heat production and that for maintenance. However, the covariate maintenance energy was found to be a signifieant effect in heat production at wk 10 and 14 postpartum. The effect of maintenance interacted with periods in most energy partition and efficiency measures. 4.2 INTRODUCTION The fundamental aspects of energy metabolism were described by results from several complete energy balance trials in direct or indirect calorimeters (Knott, 1934; 26 27 Moe, 1966; Moe and Tyrrell, 1973; Van Es, 1961). An explanation for the causes of variation in energy efficiency of animals fed different diets was provided by Armstrong and Blaxter (1957'; 1957”; 1965). They observed that the heat increment of VFA was controlled by the amount of acetate in fattening sheep but had less effect in sheep at maintenance. Thus, it was demonstrated that the end-products of digestion were more important than nutrients consumed in understanding metabolic efficiency in ruminants. Variation in partial efficiency of use of energy of VFA for milk production and maintenance also was shown to be of considerable significance. In addition, the type of ration (Flatt, 1966; Tyrrell et al., 1973), level of intake (Moe, 1966), level of production (Flatt, 1969), stage of lactation (Janicki, 1985), environmental conditions (Young, 1976), and size of the cow (Tyrrell et al., 1973) can affect the partition of the energy consumed. However, effects of variation in amount and type of diet on energy efficiency and energy partition are better explained by a knowledge of amounts and balance of the specific metabolites which are absorbed from the digestive tract. A plethora of literature exists on the influence of ration composition and level of intake on digestive efficiency, but there is a paucity of data that describe the associated magnitude and sources of variation. Much of the previous work has focused on proportions in partitioned energy intake by a typical, or an average, cow. However, an examination and understanding of variation among cows is much needed. Such an understanding may indicate whether the efficiency of a cow’s ability to convert energy intake for production would be a worthwhile criteria for genetic 28 selection. This study was undertaken to determine the amount of variation and examine specific sources of variation in each of the partitioned energy uses and energy efficiency measures. 4.3 MATERIAIS AND METHODS 4.3.1 Experimental Procedure and Data Measurements were taken on 34 pluriparous cows during the course of three periods, wk 6, 10, and 14 postpartum. Diets were protein supplements, low-protein concentrate, com-silage treated with urea at ensiling, and wilted grass silage fed individually for ad libitum intake. All ration components were blended and fed twice daily to provide at least 2.3 kg of orts daily as indicated by Holter (1982). Composites of low-protein grain and supplements were ground in a Wiley mill (1- mm), mixed thoroughly, subsampled, and analyzed for proximate nutrients, ADP, and combustible energy (Parr adiabatic oxygen bomb calorimeter). Milk samples were collected from each milking, composited over the collection period, and analyzed for combustible energy according to methods described by J anicki and co-workers (1985). Feces and urine were collected using mechanical separators and weighed daily; a 1% aliquot was taken each day and composited over the 6—d collection period. Following excreta collection, cows were placed in an open circuit, indirect respiration calorimeter to measure heat and CH. production for two consecutive ll-h periods. Samples of composite chamber air were analyzed for C0,, CH“ and 0, concentrations. Thereafter, energy balance was determined by difference between 29 inputs and outputs. Energy partition variables were fecal energy (FE), urinary energy (UE), digestible energy (DE), methane energy, metabolizable energy (ME), heat production (HP), heat increment, net energy (NE), milk energy (MKE), maintenance (MNT) and energy balance (EB). Efficiency values of energy conversion were expressed as ratios of energy in product and the product from which it was formed, namely, MNT/ME, MNT/NE, MKE/ME and MKE/NE. 4.3.2 Model and Analysis algorithm Within each of the three postpartum periods, crude mean and SD were computed for each of the energy expenditure and efficiency variables. Proportions of partitioned energy intake first were expressed using crude means. Variation among cows was expressed in CV. Variation in energy intake and in each of the partitioned energy measures was analyzed using a within period model: yw=u +S,+1}+P,+b,xwfl+b,xm+ew where: ytfld is an energy partition (kcal) or efficiency (%) trait; p is a constant common to all observations; St is fixed effect of season, i=1,2, and 3 where 1 is November through March, 2 is June through August and 3 is other months; 1} is fixed effect of treatment, j=1,,,,,4; P1: is fixed effect of parity, k=2,3, 24; xiv” is maintenance (kcal) as a covariate; X201! is milk energy (kcal) as a covariate; and 5W is random residual error distributed as, NIOJOI) where of is assumed to be 3O homogenous across all groups. When yw was milk energy or a related trait, qu was dropped from the model. Similarly, when ya“ was maintenance or an associated measure, x“ was excluded from the model. All analyses were performed using SAS" GLM (1985). 4.4 RESULTS AND DISCUSSION The partitioning of energy intake was based on raw means of cows over the duration of the energy metabolism study. Figure 3 illustrates the overall means and SD of the energy intake variable expressed as a percentage of gross energy (GE) consumed. The chart depicted the flow of dietary energy through a dairy cow: GE less FE yielded DE, which gave ME after subtracting UE and CH, and so on. Utilization of energy for production was more than that for maintenance. The proportion of energy left over as tissue energy balance portrays that the experimental animals were in positive energy balance. These energy partitioning data are consistent with those reported by Flatt (1966). Changes in the postpartum partitioning of ingested energy are discussed in more detail elsewhere (Janicki, 1985). The within period means and SD for the energy partition traits are given in Table 2. Intake of GE was comparable for the three stages of lactation. Fecal and CH. energy, HP, and EB appeared to increase whereas the DE, ME, and MKE decreased over time. These changes in the energy utilization could be attributed to changes in diet and production (J anicki, 1985) as lactation progressed. There was more variation 31 100 33.5% (2.“) 100% GE eo ——«» ao — 70 _L FECAL 2.495 (.490 URINARY “'5‘ (2.“) DE ‘° fl 4.59s (.ax) METHANE III T— E 12.795 (2.2%) ME 0 so 59.3% (3.0%) * HEAT mcneueur 15.9% (2.0%) NE ‘0 _ 4a.”; (3.39s) 30 — MAINTENANCE 2a.“ (5.2%) 20 —— MILK PRODUCTION WEIGHT GAIN OR LOSS CONCEPTUS 1° —‘ HAIR o 2.1% (5.3%) EB v Figure3. Overall mean percentages forpartitioningofenergy intake (n = 34). ValuesinparenthesesareSDforeachenergypartitiontrait. 32 o: 83. Ge :8 8m 88 a8 32 3e 3% on. E 8.33 98m 2 8:. 4: Sta 8 nos. 48 was" a a!“ n3 Inca 388%: o a; «2 ~82 e 3.» e: 3.3 a. 3m «2 83 38885835“: 2 ”new 3» 36: S 3:. 48 R23 2 «an «a 884 @8832 an 38 an ~32 3 3.2 «8 “$2 a cam 2h «an: egos .8: 2 8am «on «Sea 2 88 «.3 83s 2 :2 5 Eva 8332a .8: 2 8mm 82 2.34 : 38 :5 Sam 2 fine 8: 85 .acofiaegsqc: a 84 2. 3:. 2 so a: in on an» n: can 38525.82 8 :4 2 £8 a n3. 2. 88 on «an 8 SE .388 has: : $8 $2 wanna : $8 8: ~38 2 88. 32 80% .908 spouse 2 32 3e 88m 2 a: 8” Sea 2 89. «2. «88 38518". : 38 $2 33 S 8850: 8%» 2 FEES. «$9 385.35 a [.53 I a lasso. II a [383. .II >O 8 mm 53: >O mm mm :3: >O om mm :8: :5. E: 35, a.:: x? use; .33 Estuaoma 3.003 3.028 3 A3“ I 5 3.532: 33:0 .8. >0 v:- .Qm .mm .52.: moron 55; .N mania. 33 in the energy used for production than for maintenance. Variation in CH. was higher than that for UE. However, with the exception of EB, variation among cows was not very high. The efficiency of energy utilization is shown in Table 3. Methane loss as a proportion of DE, and HP as a ratio of ME increased by wk 14 postpartum. The increased forage in the diet could account for this trend. Urinary losses were relatively similar in all three periods. Likewise the efficiency of ME and NE for maintenance did not change. Therefore the decrease in efficiency in milk energy from ME and NE over time could be associated with reduced milk yield with time. On the other hand, the use of ME for MNT appeared to be constant across all periods. Consequently, the conversion of ME into tissue energy balance, increased from wk 6 to 14 and represented the highest variation among cows. Postpartum fluctuations in the magnitude of the variation in the efficiency traits are indicative of a substantial amount of variation in the efficiency of GE partitioning during lactation. The amount of variation in each of the energy conversion traits was partitioned using the within period model. The levels of significance for all fixed effects and partial regression coefficients for the covariates are shown in Tables 4 and 5 for selected traits. Energy in milk was an important source of variation in HP, ME, NE, and EB during the postpartum period (P < .05). The results suggested that variation in the efficiency with which ME or NE are used for HP, MKE, or MNT is independent of diet, season, and parity. 34 :38:an u m2!“- .3§3hwuouo H mm .355 SEE u 5:2 £928 o_e§:3308 1 mi 68323::— 1 P22 66:03.2.— .8: I .5 $928 2.533“. I m0 .383 at: 1 m9. an: E 3 am was 3 3 3 98a 5 a. 3 3.8 3. a. on $53 a: 92 5 2n 5; 3 3 as 2: 2: 3 one 3: a2 3 as mzamxz 2: S. as as. a: as a; 2:. no. 3 3 a: we. 3 a. «.8 szuz 3: 3. A. 4.3 2: 3. m. «.3 an an a. a: 9: a... m. 3a MET—.22 2 an m. a: 92 an e. EN ”.2 N... A. 4.8 a: an 4. as $1.52 as S. w. 4.8 2: an a. 9% as S. m. at. as 3 m. 9% 82;: 3 w. _. as 0.2 a. a. we is E N am 3: 3 _. E. maize a: e. _. an we a. _. an a: o. a an 2 e. _. an 825 a >0 mm mm :82 >0 mm mm 5.: >0 mm mm 98: >0 9. mm as: .8382 9:33 9.23.3 .533 .326 .ae 5.9.8.383 38:: six 2 avgasfiégefidm .mm as... 8.5.. SEE-.355 .m 35:. 35 TABLE 4 . Critical levels (P - value) for main effects and partial regression coefficients for covariates from within period model: energy partition measures. P - value b(MNT) b(MKE) y I Wk. Estimate P - Estimate P - E: W postpartu TreatmentParity Season of b SE value of b SE value 111 HP 6 .27 .84 .55 .79 .52 .15 .17 .09 .08 .15 10 .19 .97 .48 1.20 .66 .003 .19 .14 .01 .41 14 .13 .42 .26 1.77 .41 .01 .20 .07 .17 .34 ME 6 .18 .87 .36 -1.09 1.24 .39 .84 .22 .001 .30 10 .89 .65 .23 1.75 .90 .06 .82 .16 .0001 .52 14 .03 .55 .18 2.71 .98 .01 .68 .21 .003 .54 NE 6 .28 .82 .26 -.98 .98 .33 .68 .18 .001 .30 10 .65 .69 .39 1.50 .82 .08 .61 .15 .0003 .42 14 .31 .78 .63 1.91 .10 .07 .47 .21 .03 .25 MKE 6 .48 .70 .08 1.50 1.03 .17 Dropped .10 10 .82 .68 .21 .55 1.12 .63 -.06 14 .69 .18 .03 .09 .96 .93 .12 MNT 6 .51 24 .70 Dropped .04 .03 .17 -.01 10 .36 .20 .83 .02 .04 .63 -.05 14 .27 09 .60 .004 .04 .93 BB 6 .28 .82 .26 -1.98 .98 .05 -.32 .18 .08 .24 10 .65 .69 .39 -.39 .82 .55 -.39 .15 .01 .02 14 .31 .78 .63 -.53 1 .37 -.53 .21 .02 . 17 'E3 = energy balance, HP = heat production, ME = metabolinble energy, MKE = milk energy, MNT == maintenance, NE = net energy. 36 .3555: u m2 .888 u P22 .355? u mum: .355 0—39.89: I m2 .guoavemuoo: H mm .0233 355 I mm. 8. 8. 88. 8.- 3.. 8. 8.- 8. 8. 8. z 3. 8. 88. 8.- 8. 8. 8.- 8. 8. 8. S 8. 8. 88. 8.- 8. 8. 8.- on. 8. 3.. 8 85mm 2. 8. 88. 88.- 8. a. a. 3 S. 88. 88. 8.- 8. 8. 8. 2 8. 8. 88. 88.. 888: 8. 8. 8. e 52.52 8. 8. 88. 88.- :. 8. 8. z 8. 88. 8o. 8.. 8. 8. 8. 2 8. 8. 88. 88.- 888: s. 8. an. e 38.52 8. an. 8. 8.- 8. 8. s. z 2.- G. 8. 8.- R. 8. 8: 2 :. 3&8: 2. 8. 8. 8. 8. an. o 858.: 2. 8. 8. 8.- 8. 8. 8. z 2.- 8. 8. 8.- a. 2. 8. 2 a. 8&2: I. 8. 8. 8. 8. 8. o 83.8.: :.- 8. 88. 88.- 8. 8. 8. 8. 8. 2. 3 a. 8. 88. 8.- an. 8. 8. 8. 8. 8. 2 8. n8. 8. 8.. 8. 8. 8. a. 8. 8. o :22: 3.: mm a 8 3? mm a 8 =83- bfim 5.58; 33:98.. a. "m .m 33.8 .m 38 a; _ a 8.28 9228 83.: .588 35850 355 :32: 35: £58 :5: 53:38 .5. 858508 58632 3.5: 5 88¢“. 8 .5» A023 - 5 205. 52.5 .n man‘s 37 Not shown are comparable results for water intake and body tissue balance (Appendix 111). Energy for maintenance accounted for a significant proportion of the variation in HP, ME and NE at wk 10 and 14 postpartum. As expected, the partial coefficients for maintenance generally were higher than those for milk production. Replacing MKE and MNT in the model by SCM and BW'”, respectively, yielded almost identical results. 4.5 CONCLUSIONS Dietary energy consumed in the postpartum period by lactating Holstein cows was partitioned by indirect calorimetry. Average values in partitioning of energy intake agreed with textbook estimates. Variation in energy utilization traits was found to be high while variation among cows, for most of the traits except energy balance, was low. It was observed that the utilization of ME for milk decreased as lactation progressed. For these data, dietary source of energy, season, and parity were not very important factors in explaining variation in the partitioning of DE or ME for HP, MKE, or MNT. Clearly, much of the variation in energy traits can be attributed to energy in the milk. Variation exists in the efficiency with which energy is utilized; if genetics is a major factor in that variation, then evaluation of individual genetic merit for energetic efficiency traits should provide useful management information. This could be made possible from dietary attributes observed on the animal in the field or barn. However, 38 the validity of this approach is still questionable because previous studies have not examined energy chamber and field data on the same cows. Therefore, comparisons of energy partition measures determined from calorimetry with those from field or barn data, on the same cows, are necessary in order to provide pertinence for field data. 5 Energy intake and Gross Efficiency Comparisons from Calorimetric and Field data on the Same Lactating Cows 5.1 ABSTRACT Estimates on gross efficiency were obtained from feed intake and production data on 30 pluriparous Holsteins cows during wk 5, 7, 9, 11, 13 and 15 postpartum. Energy intake and efficiency measures from energy chamber on the same cows were taken during wk 6, 10, and 14 postpartum. Measures of gross efficiency were expressed in terms of utilization of metabolizable energy or net energy for production and maintenance. For corresponding postpartum periods, comparisons were made between chamber measures and field estimates by canonical correlation analysis. All energy and gross efficiency estimates from field data closely approximated measures of the same traits from energy chamber data. Variation among cows in gross efficiency for field estimates was one half that for chamber measures. On the other hand, variation among cows in energy partition traits was consistent for both field estimates and energy chamber measures. Correlations greater than .87 were observed between field estimates and chamber measures on maintenance energy and milk energy. Field estimates and chamber measurements of metabolizable energy and net energy had correlations of .58 and .37, respectively. 39 4o 5 .2 INTRODUCTION Alloeating energy intake to energy for milk yield in a lactating cow is an important aspect in energy metabolism. Exact measures of energy intake from dietary sources can be determined by direct (Knott, 1943) or indirect calorimetry (Moe etal., 1972) but this can be costly. 80, several methods have been developed to predict feed (Brown et al.,1977; NRC, 1989; Moore and Mao, 1990; Van Soest, 1967) and energy (Moe and Tyrrell, 1972; Moore and Mao, 1992; NRC, 1989; Tyrrell and Reid, 1965; Walter and Mao, 1989) intake using variables such as BW, milk production, forage type, fiber content, age, parity, and season. Genetic selection for energetic efficiency is of increasing importance. Numerous studies have shown that selection for milk yield brings linear increments of feed efficiency (Blake 1979; Freeman, 1975). Nonetheless, Blake and Custodio (1984) concluded that efficiencies of nutrient utilization have not been influenced by selection for milk production . Despite the rising costs of feeding cattle, current dairy cattle evaluations do not consider information on individual feed intake nor on efficiency of energy partitioning. This is, in part, because the establishment of such a data base, by installing calorimetric apparutus on farms, would be both expensive and impractical. Therefore, accurate approximation of energy efficiency using data obtainable under normal conditions would be highly desirable. Walter and Mao (1989) compared estimates of energy intake from field collected data with literature chamber results and found that accurate approximation was plausible. 41 However, in order to determine the validity of efficiency estimates from field data, it would be necessary to compare estimates from field data with exact measures from energy chambers on the same cows which was the objective of this study. 5.3 MATERIALS AND METHODS 5.3.1 Experimental Design and Data Data used in this study came from a study which examined the effects of percentages of crude protein and nitrogen solubility in the diet and their interactions on digestibility, energy and protein balances (Janicki, 1985). In that study measurements were taken on 30 pluriparous cows, in energy chamber, during wk 6, 10, and 14 postpartum. Diets were as described by Holter et al. (1982) and Janicki (1985) and energy balance was determined by methods described by Saama et a1 (1992‘). Energy intake variables were metabolizable energy (ME), net energy (NE), milk energy (MKE), and maintenance energy (MNT). Gross efficiency (GREF) measures from energy chamber were thus expressed as ratios of MNT/ME, MNT/NE, MKE/ME and MKE/NE. Recorded for each cow in wk 5, 7, 9, 11, 13 and 15 postpartum were DMI, milk yield, milk fat, and body weight. Estimated ME (M) and estimated NE (eNE), and estimated GREF (eGREF) were obtained from DMI: eME (Mcal/d) = [ (1.57 x Grain) + (1.29 x C8) + (1.07 x HCS) - (1.31 x Orts)], eNE (Mcal/d) = [ (.93 x Grain) + (.77 x CS) + (.65 x HCS) - (.78 x Orts)], where Grain, CS and HCS are daily consumption, in kilogram per day, of grain 42 concentrate, corn silage and haycrop silage, respectively, and orts in kilogram per day. Coefficients for energy value of feeds are those reported by NRC (1989). Estimated energy in milk (eMKE) was, eMKE (Meal/kg of milk) = [(.3512 + (.0962 x 96 fat)]. Estimated MNT (eMNT) was (NRC, 1989), eMNT (Mcang of BW'") = .086 x BW'75(kg). 5.3.2 Analysis Procedures The variables for comparison were: 1) chamber measures of MB, NB, MKE, and MNT in wk 6, 10, and 14 postpartum; 2) estimates from field data on eME, eNE, eMKE, and eMNT from averages of wk 5 and 7, 9 and 11, 13 and 15 postpartum; 3) chamber measures of GREF in MKE/ME, MNT/ME, MKE/NE, and MNT/NE; and 4) eGREF from field data as eMKE/eME, eMNT/eME, eMKE/eNE and eMNT/eNE. Paired comparisons of means, SD and CV’s, and computations of product- moment and rank correlations were done: 1) between GREF and eGREF in ME; 2) between GREF and eGREF in NE. Canonical correlation analysis (CCA) was performed to compare estimates from field data to chamber measures. Canonical correlations refer to correlations that are independent of each other (Hotelling, 1936). Its use is most suited to examining correlations between a group of p X-variables and a group of q Y-variables, when one wishes to test the null hypothesis that X, and Y, variables are independent. Various linear combinations in X, and Y, are established in CCA. Then correlations between 43 the linear combinations from the sets of variables are computed. The highest correlation would correlation between X, and Y,. Thus, the CCA model reduces the dimensionality to a few linear functions of the measures under study. The null hypothesis that a canonical correlation is 0 in the population was tested by a likelihood ratio (Lawley, 1959). Redundancy analysis (Cooley and Lohnes, 1971), which measures the standardized proportion of total variation in a variable, X, or Y” that is predictable from linear functions of X, or Y, also was performed. All analyses were accomplished using SAS‘ (1985). 5.4 RESULTS AND DISCUSSION Means of energy estimates from field data were within the normal range and approximated closely energy chamber measures (Table 6). Corresponding standard errors also were similar. Variation among cows in energy use for MKE and MNT was slightly lower for estimates from field data. Averages for ME and MKE as estimated from field data were slightly higher than those for chamber measures while NE and MNT means were slightly lower. Similar trends were observed for means computed within periods (Table 7). Differences between ME and eME and between MKE and eMKE decreased as lactation progressed while differences between MNT and eMNT and between NE and eNE remained fairly constant. The large differences in wk 6 postpartum may be due peak lactation as shown in Figure 4, and the state of negative energy balance, during that period. Therefore, field estimates at wk 14 postpartum perhaps were most representative of actual energetic efficiency of cows. 44 TABLE6. Overall mean, SE, SDandCVforenergymeasuree fromenergychamberand from field data on the same 30 pluriparous Holstein cows in early lactation. Energy measure Energy chamber Mean SE SD CV --—- Meal/d —— % Metabolinble energy 50.68 .64 6.03 11.9 Net energy 39.78 .52 4.98 12.51 Milk energy 24.74 .52 4.91 19.83 Maintenance energy 13.29 .08 .79 5.98 Field Mean SE SD CV -— Mcal/d —— % 61.19 .92 8.76 14.31 36.44 .55 5.21 14.29 26.33 .48 4.58 17.39 10. 11 .07 .63 6.20 TABLE7. Mean, SE, SDandCVofenergymeasuresfromenergychamberandestimates from field data on the same 30 pluriparous Holstein cows in early lactation. Energy measure Energy chamber Mean SE SD CV — Meal/d —— % WED Metabolizable energy 51.84 1.17 6.39 12.32 Net energy 41.13 .94 5.13 12.47 Milk energy 27.21 .90 4.91 18.05 Maintenance energy 13.32 . 16 .86 6.45 flk 19 mstpartug} Metabolizable energy 50.58 1.07 5.85 11.56 Net energy 39.65 .91 4.96 12.51 Milk energy 24.72 .86 4.74 19.15 Maintenance energy 13.26 .15 .80 6.06 W Metabolizable energy 49.61 1.06 5.83 11.75 Net energy 38.57 .85 4.66 12.08 Milk energy 22.27 .70 3.83 17.20 Maintenance energy 13.29 .14 .74 5.59 Field Mean SE SD CV — Mcal/d —— 96 64.57 1.56 8.56 13.26 38.39 .93 5.10 13.29 28.91 .80 4.39 15.20 10.18 .13 .70 6.82 61.06 1.68 9.20 15.06 36.36 1.00 5.48 15.08 26.46 .78 4.26 16.10 10.04 . 12 .64 6.40 57.93 1.35 7.39 12.75 34.56 .81 4.41 12.77 23.61 .64 3.52 14.89 10.09 .10 .54 5.40 45 However, results from paired t—tests indieated that means were significantly different (P < .0001) in all postpartum periods. Notwithstanding, CV for mean absolute value of differences between field estimates and chamber measures were as high as 70%. This suggested differences between estimates and measures for energy traits were quite erratic and misleading as evidence for correspondence between chamber measures and field estimates. “MI. 1 j figure 4. Lactation curve for 30 pluriparous Holstein cows The field estimates of efficiency in eMKE and eMNT from eME were significantly lower than measures from energy chamber (P < .0001) as shown in Table 8. Approximation of NE utilization for MKE by eMKE / eNE were higher, while that for eMNT was lower (P < .0001). This implies that the formulae for estimating MKE was more precise than that for MNT. 46 TABLE 8. Overall mean, SE, SD and CV for efficiency measures from energy chamber and estimates from field data on the same 30 pluriparous Holstein cows in early lactation. Energy chamber Field Efficiency measure1 Mean SE SD CV Mean SE SD CV % % MKE/ME .48 .01 .08 16.21 .43 .01 .07 6.97 MKE/NE .62 .01 .10 16.51 .73 .01 .12 7.03 MNT/ME .27 .004 .04 13.62 . 17 .002 .03 6.91 MNT/NE .34 .01 .05 14.08 .28 .004 .05 6.91 ‘ME = metabolizable energy, MKE = milk energy, MNT = maintenance energy, and NE = net energy. The within period means for GREF and eGREF are given in Table 9. In constrast to results in Table 8, among cow variation in energy utilization from field data was not always lower than that for corresponding chamber measures; variation in GREF in ME and NE for maintenance was higher at wk 10 and 14. From wk 6 to wk 10 postpartum, mean differences between GREF and eGREF remained consistent. The product-moment and rank correlations between field estimates and chamber measures in energy are presented in Table 10. Correlations among MNT and eMNT were the highest. Correlations between MKE and eMKE, between MNT and eMNT were higher than correlations between either NE and eNE or ME and eME. The rank correlations were moderate to high and consistent with the product-moment correlations. 47 38.8.8.2." ulna-.Reosggegu fizzéwgamfiu g.§3£§§n HS. $2 8. 8. 8. 2.: 3. 8. mm. 22.2: 3.2 8. 3o. 2. 3.: 8. 8. a. mick: 2.2 8. 8. S. 8.2 2. 8. %. mzauz 3.: 8. S. 2.. 8.2 S. 8. 3. mg: 933 :2 8. 8. ”N. NE: 8. 8. 3. szz: 2 .2 8. 3o. 2. 3.2 3. 8. 2. $5.22 an: 8. 8. s. 3.2 2. 8. 1.. mzauz «62 S. 8. 3. 8.2 8. 8. 3.. mg: a a c 2.: 3. 8. 2. 2 .2 8. 5. no szzz 8: 8. «.8. 2. 2 .2 3. 3. ea. $5.22 :2 :. 8. 8. 2.2 2. 8. 2. mzaxz 8.2 8. 8. an. 2 .2 8. 3. 2.. mg: 3 a 9.. >0 on mm :8: >0 em 8 as: .853... Egan not 8520 38m doc-8: been 5 .38 53:6: nap—gm on 058 95.5.3. :8 eégnaafiezogee. Baggage... 5238.368: 533... 48 TABLE 10. Product-moment correlations between field and energy chamber measures of energy intake from data on the same 30 pluriparous Holstein cows in early lactation; values in parentheses are rank correlations. Field estimate2 Chamber measure‘ eME eNE eMKE eMNT ME .71 .71 .58 .37 (.73) (.66) (.63) (.18) NE .65 .65 .57 .32 (.73) (.66) (.62) (. 18) MKE .58 .58 .87 .21 (.56) (.53) (.86) (.22) MNT .23 .23 .24 .91 (.32) (.29) (. 16) (.92) 'ME = metabolizable energy, NE = net energy, MKE = milk energy, MNT = maintenance energy. 2eME = estimatedME,eNE= estimatedNE,eMKE = estimated MKE, and eMNT = estimated MNT. Correlations between GREF and eGREF, in Table 11, were relatively high but lower than those in energy traits. The rank correlations between GREF and eGREF were, in most instances, higher than the product—moment correlations. Negative correlations between utilization of either NE or ME for MKE and use of MB or NE for MNT reflect that the lactating cow must sacrifice efficiency for production in order to partition more energy for maintenance. 49 TABLE 11. Product-moment correlations between field and energy chamber measures of energy efficiency from data on the same 30 pluriparous Holstein cows in early lactation; values in parentheses are rank correlations. Field estimate2 eMKE/ eMKE/ eMNT/ eMNT/ Efficiency eME eNE eME eNE measure‘ MKE/ME .59 .59 -.25 -.24 (.59) (.56) (.04) (.03) MKE/NE .55 .56 .24 -.24 (.59) (.56) (.04) (.03) MNT/ME -.04 -.04 .59 .60 (-.26) (-.25) (.71) (.64) MNT/NE -.06 -.06 .57 .57 (-.26) (-.25) (.71) (.64) 'ME - metabolizable energy, NE = netenergy, LIKE == milk energy, MNT=maintenanceenergy. M=estimatedME,eNE=estimaredNE,eMKE= estimatedMKE,andeMNT =estirnatedMNT. Linear combinations of the field estimates and chamber energy measures were examined by CCA. Tables 12 and 13 show CCA results for comparisons between chamber measures and field estimates of energy partitioning and efficiency, respectively. Because the comparisons involved four energy partitioning or efficiency variables at a time, we could have, at most, four orders or dimensions. As expected, the eanonical root for first order was the largest. The first dimension also gave the largest correlation among the linear combinations of the chamber and field variables. Within each period, summing all four canonical roots yielded the total variance. At wk 6, 10, and 14 postpartum the first squared canonical correlation was significant (P < .0001) and the first two dimensions accounted for over 90% of the total variation 50 with the highest cumulative proportions occuring in wk 14. These dimensions depicted convincing evidence for strong linear associations between the factors. Results of the redundancy analysis showed slightly reduced cumulative proportions of variation in GREF, at wk 6 and 14 postpartum, which was indicative of lower precision in those estimates. This might also imply that some of the negatively correlated variables could have been acting as suppressors. Notwithstanding, for energy intake and GREF measures in the energy chamber, the highest proportion explained by the field variates was at wk 10. A factor loading is a correlation between the underlying canonical variable and the observed trait in question. The factor loadings for the energy intake variables showed that all the measures from field data contributed significantly in the relationships between the canonical variables and energy traits (Appendix V). The chamber canonical variables had the highest loadings for field MKE and MNT. On the other hand, the mixture of signs on the factor loadings for the GREF measures confirmed the existence of suppression. The GREF in ME and NE for MKE acted to suppress the relationships between the canonical variables and the GREF in ME and NE for maintenance. This could be so because, in the first vector, the contrast was between efficiencies for milk energy and those for maintenance. It is worth noting that the second canonical variable for the field variables, at wk 10, had very strong positive correlations with all the field GREF variables. These data are in agreement with the initial observations that the post-peak GREF estimates were more precise. 3. V .5. .3. V 5.8 .800. v ken... 3 . 84 . . . 3 *— ha. a. 8. 8 can mv. 50. no. “N ass :3. an an. to N nae—o 33:65 39 a a I .5 e332; 22325 33 .o a 0—; 33:50 39... e o as 8. .v «N. n hm. N 3.5 ~ .03— 520 Eggnog 3 v5 2 .o a... a 58 «5.3 8 25. 2. .8 83.8... $8629 :2» 938.33 vs. sou 82.3 9% 33338 a: :8. .8286 .2 39:. 1 5 8. V .7 .5. v tee .88. v he: 9. 8; 2. 8; no. 84 v 305. a. 8. mm. 32.. a. no. a. «no. a. 3 an. n nee—o. so. 3. vnd :53. 3. an. and «name. 8. en $6 N sauna. no. no. :6 238. 8. 3. mad— esano. on. an wed a 95 ouSeoBoa count: .03— 95 cusses; can; .03— 95 ems-880a can; .03— 820 968.550 38.3 R 9513550 33.3 $ 255.550 38.3 I .1 x3 2 S o M3 Esp—1&3.“ 12.2 ease-asuéfiaonoeasasgieoisgfiuagaaaaag9533;389:8233.239; 52 5.5 CONCLUSIONS Estimates of energy intake and gross efficiency estimates from data obtainable from field data closely approximate measures from energy chamber. Therefore, establishing a database on energy partitioning and energetic efficiency of individual cows from field data may be worthwhile if such measures are desirable for management and if genetic evaluation of animal’s energetic is desired. The use of post-peak field data to estimate energetic efficiency provided more reliable estimates of energy partitioning than those obtained during peak lactation. This study examined measures versus estimates, a closer examination would necessarily involve the partitioning of phenotypic means and variation into genotypic and environmental means and variation. 6 Comparisons of Genetic Parameters for Energy Intake Estimated from Energy Chamber and from Field Collected data on the Same Lactating Cows 6.1 ABSTRACT Measures of energy intake from energy chamber ean be approximated closely by estimates from field collected data according to a study using the same data as in this one. This study estimated genetic parameters of these measures and of partial energy requirements from energy chamber and field collected data. Data from 67 primiparous Holstein cows collected at peak and post peak lactation consisted of measures of DMI, milk yield, BW, metabolizable energy, net energy, and maintenance energy. From DMI and milk yield, energy partitioning was estimated. Univariate and multivariate animal models were used to estimate genetic parameters for these energy traits. . Partial energy requirements were estimated using an animal model which included covariates of age at calving, milk energy, maintenance energy, and weight change. (Co)variance components were estimated by a derivative-free REML algorithm. Genetic and phenotypic variations and heritability estimates in energy intake variables, at postpeak lactation, were similar from chamber and from field data. This was not always the case at peak lactation. There was little difference in solutions for covariates with and without animal effects. However only solutions for maintenance energy from animal models matched literature values. 53 for i dais U168! 54 6.2 INTRODUCTION The potential for increasing milk production through feeding is well appreciated. Efficiency is usually defined as the ratio of output over input or its inverse. Selection for improved efficiency may replace selection for total outputs such as milk yield in dairy enterprize today and future. Feed consumption data is required in order to measure efficiency. Good knowledge about partial energetic requirements is fundamental to establishing energy efficiency criteria. Freeman (1967) showed that the direct measure of efficiency under commercial conditions does not seem to be economically feasible. He concluded that, "Selection for higher milk yield automatically improves feed efficiency”. Notwithstanding, Grieve et al. (1976) and Custodio et al. (1983) examined the relationship between estimated transmitting ability for milk production and digestibility of dietary components in Holstein cows. Both studies concluded that digestive ability of a cow was independent of predicted transmitting ability. Buttazoni and Mao (1989) found that the genetic correlation between net efficiency and production was only 60% . We can attribute this lack of association to the low variability among cows in digestive ability. Van Es (1961), Wagner (1965) and others (Andersen et al., 1959; Saama et al., 1992', Taylor et al. , 1986) demonstrated that little variability exists among cows in their ability to digest a given diet, particularly when intakes are standardized. However, considerable variation exists in maintenance energy requirement (Bauman, 1985; Taylor et al. , 1986) and energy requirement for producing milk (Saama et al. , 55 1992') in cattle. Korver (1988) reviewed the importance of different components of efficiency in selection programs. Genetic aspects of feed and energy intake have been studied (Blake and Custodio, 1984; Freeman, 1967; Korver, 1988). Genetic parameters for feed intake (Korver, 1988; Stone et al., 1960) and fwd efficiency (Blake and Custodio, 1984; Buttazoni and Mao, 1989; Hooven et al., 1968), energy intake (Taylor et al., 1981) and energy efficiency (Buttazoni and Mao, 1989) traits of lactating cows also are documented. These studies indicated that feed and energy efficiency are moderately heritable traits. But genetic estimates can be valid only in data collected from a large number of animals. In view of the high cost of calorimetric determinations of energy partitioning, generating similar information from field collected data is highly desirable. Walter and Mao (1989) estimated net efficiency of energy conversion from on-farm data and found them to be in close agreement with published chamber results. They indicated that in order to verify these results, similar comparisons involving field and chamber data on the same cows would be desirable. Saama et al. (1992”), using field estimates and chamber measures of energy utilization on the same cows at peak and postpeak lactation, showing that field estimates approximated energy chamber measures closely, hence supported the validity of using field data to approximate chamber energy measures. However, the efficacy of using field data to estimate genetic parameters for energy efficiency needs to be examined. At peak and postpeak lactation, using energy chamber measures and field estimates of energy partitioning on 56 the same cows, the objectives of this study were to make comparisons between chamber and field: 1) genetic parameter estimates for energy utilization traits; 2) partial energetic efficiency and weight change requirements; 3) partial energetic efficiency and weight change requirements with and without animal effects in the model. 6.3 MATERIAIS AND METHODS 6.3.1 Experimental Procedure and Data Field collected and energy chamber data on 28 pluriparous Holstein cows were available from a study which examined the effects of percentages of crude protein and nitrogen solubility on digestibility, energy and protein balances (Janicki, 1985); herein referred to as study A. Chamber measures were collected at wk 6, 10, and 14 postpartum. Barn DMI, BW, and milk yield were recorded at wk 5, 7, 9, 11, 13, and 15 . From separate energy balance trials (Holter et al., 1992), study B, field and energy chamber data on 39 primiparous Holstein cows were available. In study B cows were in the energy chamber at wk 7 and 16 postpartum. Barn DMI, BW, and production data was recorded at wk 6, 8, 15, and 17 after calving. Diets were as specified in (Janicki, 1985; Holter, 1992), energy balance was determined by methods described in (Saama et al. , 1992‘), and field estimates of energy partitioning were obtained using formula outlined in (Saama, 1992‘). The variables for analysis were metabolizable energy (ME), net energy (NE), milk energy (MKE) and maintenance energy (MNT). Estimated from the field 57 collected data were estimated ME (eME), estimated NE (eNE), estimated MKE (eMKE) and estimated MNT (eMNT). Two periods of measurement, peak (PL) and postpeak (PPL) lactation, were established. From study A, PL data were wk 6 chamber data and averages of wk 5 and 7 field data; PPL were wk 14 and averages of wk 13 and 15 postpartum field data. From study B, PL data were wk 7 chamber measurements and averages of wk 6 and 8 field estimates; PPL were wk 16 chamber data and averages of wk 15 and 17 postpartum field data. At PL and PPL, weight change (WC) was computed as the difference between BW (kg) at wk 5 and 7, and between wk 13 and 15 from study A. Similarly WC was calculated as the difference between BW (kg) at wk 6 and 8, and between wk 13 and 15 postpartum from study B measurements. 6.3.2 Estimation of Genetic Parameters Using estimates from field or measures from energy chamber, within PL and PPL periods, the ab trait, i = MB, NB, MKE, orMNT‘wasentered oneatatimeinan animal model (AM) [1]: Y: = a,+e, [1] where y, is a vector of 67 observations for the ah trait; a, is a vector of unknown random effects of 40 sires, 10 dams with records, 49 dams without records and 57 animals without offspring on the an trait which was assumed to be distributed as N(0,Ao:) where a: is the additive genetic variance of the ith trait and A is the 58 additive genetic relationship matrix between the total of 156 animals; e, is a vector of 67 random residuals for the ab trait corresponding to y and was assumed to be distributed as,N(o, 103) where a: is the residual variance with 80) - E(a) = Etc) = 0- Using field estimates or chamber measures, MB, NB, MKE and MNT were entered two at a time, within PL and PPL, in a multivariate AM [2]: y = Z.a + e [2] where y, a, and e are as defined in [1]. For a pair of energy intake traits, the y 0 V R 2.011 random elements in [2] had distribution: e ~ N o R R 0 a 0. 6.21 0 G. where,v = R + szz.’ R =1° ® 110,6A = A ® 60 with 2. being an incidence matrix for the animal effects, A is the numerator relationship matrix of order 156, Re is residual covariance matrix among measurements or estimates on the same animal, 00 is covariance matrix for additive genetic effect among measurements or estimates on the same animal, and ® denotes Kronecker (direct) product. Within PL and PPL, the estimated genetic and phenotypic covariance matrices 59 from field data were compared with those from chamber data using a generalization of Bartlett’s likelihood ratio test by Box (1949). The variance ratio test was used to make specific comparisons between individual variances. 6.3.3 Estimation of Partial Fmergetic Efficiency Within PL or PPL, partial requirements for MKE, MNT, WC were computed from an AM [3], analogous to that fitted by Ngwerume and Mao (1992), y, = b,(Age) + b2(MKB) + b3(MNT') + b,(WC) + a, + e, [3] where y‘ is NE; 1,” b2, b3 and b4 are partial regression coefficients for age at calving (months), MKE (Mcal), MNT (Meal), and WC (kg), respectively, with a, and ‘1 are as defined in [1]. Age at calving is included in [3] beeause of its effect on nutrient partitioning (Bauman and Currie, 1980; Bauman et al., 1985). (Co)variance component estimation in [1] and [2] and solutions for b, in [3] were obtained using a derivative-free REML algorithm described by Meyer (1991). For each run, convergence was declared when the variance of the log-likelihood function was less than 10". Sampling errors for individual parameters were estimated using univariate approximation techniques outlined by Meyer and Hill (1991). Omitting a, from [3] gave a multiple regression model (MRM), [4] , which was used to estimate partial energy efficiencies ignoring animal effects. Analyses for the MRM were performed using SAS‘ (1985). 60 6.4 RESULTS AND DISCUSSION Genetic parameter estimates from [1] and [2] and solutions from [3] and [4] were used for the purpose of making comparisons between chamber measures and field estimates of ME, NE, MNT, and NIKE. The direct use of these etimates may not be appropriate due to the very small sample size. 6.4.1 Genetic and Phenotypic Variation In general, convergence was reached after approximately 30 evaluations of a mixed model equations. The genetic and phenotypic standard deviations, heritability estimates and associated standard errors for energy intake traits, at PL and PPL are shown in Table 14. At PL, genetic variation in ME, MKE, and MNT were not different from that in eME, eMKE, and eMNT. However, genetic variation in NE and in eNE was significantly different (P < .05). During PPL, genetic variation in all intake traits estimated from chamber and those estimated from field data was very similar. With the exception of phenotypic variation in MNT and eMNT, all chamber and field energy intake characteristics were comparable (P < .05), at PL. Notwithstanding, at PPL, phenotypic variation in chamber energy utilization traits and corresponding field traits was not different. Although the heritability estimates for ME and eME, MNT and eMNT were alike at PL, the heritability estimate for eMKE was higher than the heritability estimate for MKE. Furthermore, the heritability estimate for eNE was twice as high as that for NE, at PL. Also, standard errors for heritability estimates, at PL, tended to be high. Yet at PPL, heritability estimates for all 61 TABLE 14. Additive genetic and phenotypic SD and heritability for energy measure traits at peak and postpeak lactation. Chamber Field Additive Additive genetic SD Pbenotypic Heritability genetic SD Pbenotypic Heritability Trait' (Meal) SD (Meal) estimate SE (Meal) SD (Meal) estimate SE peak ME 1.08 8.50 02 .03 1.05 10.98 01 .02 NE 588' 7.25 .66 .34 3.85 6.42 .36 .41 MKE 4.10 5.38 58 .50 4.84 5.41 .80 .38 MNT .70 1.07‘ .43 .25 .59 .80 54 .25 postpeak ME 1.02 7.80 .02 .03 .98 9.64 .01 .01 NE 1.09 6.49 .03 .02 .95 5.79 .03 .04 MKE .95 4.33 .05 .06 .92 4.44 .04 .06 MNT .73 1.02 .51 .29 .59 .77 .58 .27 1ME = metabolizable energy, MKE - milk energy, MNT =- maintenance energy, and NE = net energy. ‘Corresponding variance components significantly different (P < .05). chamber traits considered were, in some instances, identical to heritability estimates for corresponding field traits. Buttazoni and Mac (1989) found comparable heritability estimates of .05;t.37 and .13i.34 for NE and NE for maintenance from single trait sire models, respectively. No prior heritability estimates for ME and MKE could be found in the literature. 6.4.2 Genetic and Pbenotypic Correlations An average of around 240 evaluations of the mixed model equations was required before reaching convergence. Estimates of genetic and phenotypic correlations for energy usage traits are given in Table 15 . The estimates were generally consistent within data source but disparagingly divergent when compared between data sources. 62 .385 .0: u m2 2: $3.28 33:18 n 22 £905 um:— u. 22 £908 233808 a N2. ca. 3. 3. we: Nb. no. 2.. on. S. 2.. on. 8. E2 ow. 8.2 ea. 9. 3. 3... mm. 8. ea: we. 3.- 3. $2 No. we. 2. me. R. $6 2.. on. 3. oo. 2. 2.... m2 mm. N— .- 0N. mm. mm. Nm. mm. 2 .- NN. ~o. :. 8. N2 22 ”5.2 m2 m2 22 a2 m2 m2 22 ”5.2 m2 m2 P22 m¥2 m2 m2 28,—. 32% eon—Beau Eer— BASS—U imam Meek .325 833:3: .388 303.3 32595 36.08 aged—9:8 0303» v:- anwamv 25.3 «none—oboe 03308...— .«e «8:83 .2 mam—<9 63 This may be attributable to the small sample size and its effect on the log-likelihood surface. This could have led to the possibility of local maxima at the point of convergence. Groeneveld and Kovac (1990) observed that, for small datasets, multiple solutions can exist from multivariate derivative-free REML algorithms. The space around the converged solutions was not investigated. The genetic and phenotypic (co)variance matrices for the chamber and field traits, at PL and PPL, were significantly different (P < .05). Regardless, at PL and PPL, estimates of genetic and phenotypic correlations between MNT and ME, and MNT and NE from field estimates were in reasonable agreement with those estimated from chamber measures. The estimate of genetic correlation between NE and MNT at PPL was much higher than the value of -.3 reported by (Buttazoni, 1989) but gave the most accurate portrayal of the biological relationship between those two traits. 6.4.3 Partial Energy Requirements The partial regression coefficients for covariates in AM at PL and PPL are shown in Table 16 for chamber and field data. Although the coefficients for age at calving from chamber and field data were generally in close proximity, they were much closer at PPL than at PL. While maintenance requirements would consist of the energy required to maintain and conduct activities related to homeostasis, milk energy and weight change requirements are usually associated with homeorhesis (Bauman and Currie, 1980). The requirements for MKE and eMKE, at PL and PPL, and WT and eMNT, at PL were proximate and within the range of values reported by Walter and 64 Mao (1989) and others (NRC, 1989; Ngwerume and Mao, 1992). At PPL, the requirements for MNT were higher than requirements for eMNT (P < .05). A similar trend was observed for WC. In addition, the R2 values were remarkably higher for PPL analyses. In general, these trends for MKE and age at calving were not altered by exclusion of animal effects from the underlying statistical model (Appendix VI). The partial regression coefficients in Table 17 are from MRM of [4] which ommitted the animal effects. Visual appraisal of results at PL, reveals only trivial differences between MRM and AM. The closeness between coefficients for age at calving and MKE was greater with MRM. Nevertheless, trends for MNT and WC were reversed by using MRM but magnitude of differences between coefficents from field estimates and chamber measures was consistent, at PL and PPL. Whereas estimated requirements for MKE from chamber measures using MRM, at PL, and those from field data, at PL, coincided with values published by NRC (1989), it is worth noting that the estimate for maintenance requirements, at PL, from chamber measures using AM was the only one that agreed with values reported in the literature (Walter and Mao, 1989). The theoretical expectation of y under [3] and [4] is the same but inferences from parameter estimates were not the same. 65 —. V keg-.8.V Ki... .8. V kit... 48. V $21.... m8. 1.8m. 2m. 8...- «a. .3... am. am. a... as... 2...? «S. :33... .8. :2”. a... 2.3.... as. SN. :82. 858.52 m2. tings. n1. ensign. 0.2. 1.3.3. «3. nainmvb. :82. .358 3:2 n8. .8.- .8. .8.- «8. 8o. «8. «8. .38.... M.......8 a on... mm .680 mm .680 mm .680 mm 680 .86.. 5. u .6 2...... .8. r. .6 8.5.6 5. u .6 so... .8... .6 .255 .898. as... .838. .8988 .6- 69. .a 238. 8.8632 2......5. :. 8......>8 .5. .680. 38.2.68“. 8.82m... 1...... .2 .53.... _. V mova- .mo.V k: .5. V $1.... .28. V Kai: .8. NS. NS. 258. SN. .58. z... 3... a... as... 2...; a8. :33 no... :38... NS. 258.. 9.... .8. :82. 8:833: 00—. anaram... N3. 2.3.1.». as. nice—no. N2. sienna. 232.. 3.58 5.2 “8. §. .8. v8. .8. «8. n8. 8... .38.... 9.3.8 .- on... .5 .680 mm 680 mm .680 mm .680 .86.. .3. u .6 2...... 5.. n .6 8.5.6 a... n .6 so... .8 u .6 .355 .898. 48.. 9.58. «8&8. 3. .19. a .33 1......- ... 83.2.8 8. .680. 38.8698 8.828.. 1...... .o. 39:. 66 6.5 CONCLUSIONS Genetic parameter estimates and partial requirements for energy intake traits from field collected and energy chamber data were quite similar. This similarity was greater with data collected during postpeak lactation. Accurate measurement of individual intake and production data is not limited to experimental herds. Milk recording and management programs can provide individual concentrate- intake data, especially those systems with automated individual feeders. Forage intake and testing data can be obtained on a herd basis. In practice, cows are fed according to milk yield. This may cause a high correlation between feed intake and feed efficiency. Korver (1988) suggested that considering only the first 60 days of lactation, during which cows have a negative energy balance and are fed less adequately according to production requirements might alleviate this problem. But direct selection on gross efficiency has little advantage (Buttazoni and Mao, 1989; Korver, 1988). So, for purposes of estimating genetic parameters for net efficiency, the authors suggest using intake and production during 60 to 150 days as these data provided a closer approximation. Several formula for estimating energy intake from field collected data are available from the literature. Standards nwds to be established with regard to which formula to use for prediction. Wide acceptance of such formula can be anticipated if the statistical properties of these formula are well elucidated. This is a matter that has received little attention in the literature. 67 There was trivial evidence to suggest estimates of partial energy requirements from animal models and multiple regression models differed. Including animal effects in the model reduced the error sums of squares but did not necessary increase accuracy of estimates. Omitting animal effects led to discrepant estimates of energy requirements for maintenance. Research is needed to examine the biological and statistical merits and demerits of using animal models versus multiple regression models to estimate energy requirements for maintenance. 7 SUMMARY Energy balance trials involving 34 pluriparous Holstein cows were conducted at the University of New Hampshire, Durham, during wk 6, 10, and 14 postpartum. Dietary energy was partitioned by indirect calorimetry. Average percentages in partitioning of energy intake were in agreement with classical values. With the exception of energy balance, within cow variation in energy intake traits was low. The utilization of metabolizable energy for milk energy decreased as lactation progressed. Evidence from a within period model indicated that milk energy accounted for a highly significant pr0portion of the variation in energy intake and efficiency traits. Field estimates of energy utilization measures were computed from dry matter intake, consumed by the 34 Holstein cows, at peak and post peak lactation. Both energy intake and gross efficiency estimates from field collected data approximately closely corresponding measures from the energy chamber. The precision of field estimates was higher at postpeak lactation. From a separate energy study, energy chamber measures and field estimates of energy intake on 37 primiparous Holstein cows were obtained. Data from the two studies were merged and genetic parameters for metabolizable energy, net energy, milk energy, and maintenance energy were computed. Partial energetic requirements were then estimated from animal models and multiple regression models. Excluding animal effects from the underlying statistical model did not lead to a change in estimates for energy requirements. It was verified that genetic parameter estimates for 68 69 energy intake traits estimated from data obtainable from barns were in close agreement with those estimated from energy chambers. 8 APPENDICES Appendix 1: Frequency distributions for study A TABLE 1.1. Frequency distribution of 34 pluriparous Holstein cows by treatment and Wk of measurement in early lactation. Wk postpartum Treatment‘ Wk 6 Wk 10 Wk 14 Total High CP - high N 9 9 9 27 Low CP - 9 9 9 27 low N High CP - low N 8 8 8 24 Low CP - high N 8 8 8 24 Total 34 34 34 102 ‘ CP = crude protein, N = nitrogen. 70 71 TABLE 1.2. Frequency distribution of 34 pluriparous Holstein cows by parity group and Wk of measurement in early lactation. Wk postpartum Parity Wk 6 Wk 10 Wk 14 Total Lactation = 2 14 41 14 42 lactation = 3 10 10 10 3O lactation = 4 5 5 15 Lactation = 5 4 4 4 12 Lactation = 7 1 l 1 3 Total 34 34 34 102 72 TABLE 1.3. Frequency distribution of 34 pluriparous Holstein cows by month and Wk of measurement in early lactation. Wk postpartum Month Wk 6 Wk 10 Wk 14 Total January February March April May June July August September October November December Total NWNNNMUJWNMt-‘rfi NUJUDNw-hWNUtt—ww KMMMNNWtBMt—WWN 8f 5’: 73 TABLE 1.4. Frequency distribution of 34 pluriparous Holstein cows by season and Wk of measurement in early lactation. Wk postpartum Seasonl Wk 6 Wk 10 Wk 14 Total Cold 15 12 14 41 Mild 9 12 1 1 32 Warm 10 10 9 29 Total 34 34 34 102 1Cold = November to March, Mild = April, May, September, and October, and Warm = June, July, and August. TABLE 1.5. Frequency distribution of 34 pluriparous Holstein cows by energy balance status and Wk of measurement in early lactation. Wk postpartum EBl status Wk 6 Wk 10 Wk 14 Total Negative balance 13 11 8 32 Positive balance 21 23 26 70 Total 34 34 34 102 ‘EB = energy balance Appendix 11: Frequency distributions for study B. TABLE 11.1. Frequency distribution of 51 primiparous Holstein cows by treatment and Wk of measurement in early lactation. Wk postpartum Treatment‘ Wk 7 Wk 16 Total WCS + Ca-LCFA 19 19 38 WCS 18 18 36 Control 14 14 28 Total 51 51 102 lCa-LCFA = calcium salts of long-chain fatty acids and WCS = whole cotton seed TABLE 11.2. Frequency distribution of 51 pluriparous Holstein cows by parity group and Wk of measurement in early lactation. Wk postpartum Parity Wk 7 Wk 16 Total Lactation = l 18 18 36 Lactation = 2 11 11 22 lactation = 3 10 10 20 lactation = 4 6 6 12 lactation = 5 2 lactation = 6 3 lactation = 8 l 1 Total 59 27 102 74 75 TABLE 11.3. Frequency distribution of 51 primiparous Holstein cows by month and Wk of measurement in early lactation. Wk postpartum Month Wk 7 Wk 16 Total January 8 8 16 February 3 6 9 March 5 8 13 April 2 2 4 May 1 6 7 June 3 2 5 July 1 3 4 August 6 l 7 September 3 l 4 October 6 6 12 November 7 2 9 December 6 6 12 Total 51 51 102 76 TABLE 11.4. Frequency distribution of 51 primiparous Holstein cows by season and Wk of measurement in early lactation. Wk postpartum Season1 Wk 7 Wk 16 Total Cold 29 3O 59 Mild 12 15 27 Warm 10 6 16 Total 51 51 102 lCold = November to Match, Mild = April, May, September, and October, and Warm = June, July, and August. TABLE 11.5. Frequency distribution of 51 primiparous Holstein cows by energy balance status and Wk of measurement in early lactation. Wk postpartum EBl status Wk 7 Wk 16 Total Negative balance 39 37 76 Positive balance 12 14 26 Total 51 51 102 lEB = energy balance Appendix 111: Critical levels and regression coefficients for effects in within period model to partition variation in dietary and energy intake traits TABLE 111.1. Critical levels (P - value) for main effects and partial regression coefficients for covariates from within period model: selected energy partition measures. P . value b(MNT) b(MKE) Trait' Wk. Estimate P- Estimate P- POWmTreatment ParitySeason of b SE value of b SE value GE 6 .61 .64 .71 -1.30 2.21 .56 1.27 .40 .004 .18 10 .88 .57 .11 2.92 1.69 .10 1.41 .30 .0001 .48 14 .13 .63 .22 3.52 1.58 .04 1.26 .33 .0008 .50 W1 6 .74 .29 .003 .002 .003 .57 .001 .N1 .14 .26 10 .41 .14 .21 .003 .003 .43 . .001 .96 .11 14 .33 .78 .01 .001 .002 .59 .001 .0004 .03 .23 FE 6 .87 .40 .92 -.19 1.05 .86 .39 .19 .05 -.01 10 .37 .37 .11 .94 .93 .32 .46 . 16 .01 .26 14 .85 .48 .48 .71 .85 .41 .52 .18 .01 .16 UE 6 .12 .93 .47 -.03 .08 .66 .04 .01 .02 .20 10 .003 .37 .07 .16 .06 .01 .05 .01 .MI .68 14 .05 .07 .84 .09 .08 .26 .(B .02 09 38 CH‘ 6 .75 .53 .04 .11 . 17 .54 .96 .03 .96 14 10 .93 .79 .64 .11 .12 .37 .001 .02 .WI 23 14 .61 .64 68 .03 .10 .71 .04 .02 .04 03 DE 6 .16 .85 .65 -l.l2 1.38 .43 .88 .25 .002 .28 10 .94 .77 .u 1.97 1.00 .06 .95 .18 .(XJOI .54 14 .02 .55 .21 2.81 1.05 .01 .74 .22 .002 .55 'CH. 8 methane energy, DE 8 digestible energy, GE =- gross energy, FE = fecal energy, MKE = milk energy, MNT = maintenance energy, UE = urinary energy, W1 = water intake. 77 78 888888an "E26888? amazegaoafiauiafiee88 «...-3.48“. mm. a..- 8. .... 8... e4. ..4. .h. 4. o... 8. .... 8... 8. 8. 44. ... 8. .885 4N. .... 4.... 8. ..4. 8. e a... ..2m 8. 8. .... 88. 8... 8. ..4. 4. 8. 4n. .... 8. 8. .... 8. o. 8. .88... .... .... .... 8. 8. 8. e ...... .... o..- 2. ... 8.- 8. 8. .... 4. 8.- .8. ~.. .... 8. 8. on. o. 8.- .88... 8. 4.. .... 8. 8. .4. e .6... ....2 .... 8. .... 8.- 8. 8. 8.- 8 8. 8. 4. 4..- 8. 8. . 8. 8. 4...- 8. 44. .n. ... 8.. 8. .... 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F. N. 8. 8. 8. z. 8. 8. 8.2 v.- 2..- 8.- 8.- S.- 8: 2.- 8.- 8. n. 8. 8. 8. 8. 8. m2 ...- ? 8. 8. 8.- 8.- 8. 8.- 8. R. 2.. 2.. 8. 8. 8. m2 weds-Eu m2» m2» m2» m2» m2 m2 m2 m2 .rzzo 5.2» m2» m2» 9228.2 m2 m2 2.220 2.220520 320 $.22 $22 a2 a2 30E Esau 30mm 8536 .22 I 53-inch: «38.38%0538353 52.3080 98 .8.—0:02 .05-86 .8955 .385 98 20¢ .8233 2.31058 Gig-.833 A5,. 98 cfigv 50608-892 .m.>— Emir Appendix V: Canonical Correlation Analysis Canonical correlation analysis was used to relate energy chamber values to field estimates on the same lactating cows. The objectives of CCA, in this project were to find linear combinations that produce maximum correlation between linear combinations of the energy chamber and field variables; and to look at the pattern of association between the two sets of variables. Pmceduros for Canonical Correlation Analysis Assuming that Xl, ..., X, and Y,, ..., Ya are two sets of random variables. Let X be a set of field estimates. Define X as [X,, ..., X,], the predictor variables and X ~ MVN(U,, 2,). Let Y be a set of energy chamber measures. Define Y as [Yb ..., Yq], the outcome variables and Y ~ MVN(U,, 2,). After X and Y are partitioned into the energy intake and gross efficiency variables, let the Pearson correlation matrix,,lg7 of all these intake or gross efficiency variables be X Ru I R12 p ny = R _ a ’ Y 32: l R22 ‘1 P q where Rn contains intercorrelations among the field variables, R22 is the intercorrelations among the calorimetn'c variables, and R21 = Rl2 cross-correlations between the chamber and field variables. If X and Y are of full rank, then define the 34 85 pxp matrix,G of rank,k and a qxq matrix D as, G = RIB Rake-21 12;, and D ‘ Rz-lenRt-llkz’r Because both G and D are non-symmetric matrices of the form, E“ H to decompose either G or,D define F as the upper triangular Cholesky decomposition of E“. Let,p = FHF’ then obtain the A eigenvalues and W eigenvectors of P. Let V = F’W. The diagonal elements of, A lip-«1;: are the nonzero latent roots of 5“]! and the columns of V are the orthonomal latent vectors of E411. Note that the eigenvalues of G and D are equal. Let A contain the latent vectors of G. Similarly, let B contain the latent vectors of D . Hence, A are canonical coefficients or weights for the chamber variables, 3 are the canonical coefficients for the field variables, and the diagonals of A are the squared canonical correlations (R3) between the two sets of variables. k Observe that, "(10‘ 2 N3 x! >)‘2>"'>)‘v gives the total variance. t-l Form, U, = x4, a linear combination of the field, and, V] = YB, a linear combination of the calorimetric variables, such that the correlation between (J, and VI 86 is maximized. These linear combinations are the canonical variates. We are interested in the correlations between these canonical variates. It follows immediately that because A and B are orthomomal, the correlation matrix of U‘ and V1 is, U '1, | A W R _ x I V LA I I‘ 4 Therefore, U are the canonical variates of the field variables and V are the canonical variates of the energy chamber variables. Thus, ”1 is the first canonical variate of the field estimates, and V1 is the first canonical variable of the chamber measures; U2 will be the second, and so on. If al and V1 have the maximum canonical correlation of all linear combinations, then (up V1) are the first pair of canonical variates, which are independent, i.e., the correlation between (”9 V) and (UP V1) is zero. The correlation between (U1, V1) would be the first canonical correlation and is given by A, . The variable-variate correlations between [0,; (x1, ..., X,“ and [V,; (Y,, ..., Y0] are the canonical factors or factor loadings. Thus, the entire relationship between F field variables and q calorimetric variables is expressed only in terms of k parameters 11, 12, ..., 1,. Hence the name canonical correlations. 87 TABLE v.1. Cumulative proportions of standardized variance of the chamber energy intake measures explained by the chamber and field canonical variables at wk 6, 10 andl4postpartum. Wk 6 Wk 10 Wk 14 Proportion explained Proportion explained Proportion explained by by by Order Chamber Field Chamber Field Chamber Field 1 .46 .42 .26 .24 .52 .44 2 .67 .57 .78 .66 .79 .65 3 .84 .67 .89 .72 .96 .69 4 1 .67 l .72 1 .69 TABLE v.2. Cumulative proportions of standardized variance of the chamber gross efficiency measures explained by the chamber and field canonical variables at wk 6, 10 and 14 postpartum. 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N a n N _ n u _ n N a 2:?qu as". .2520 so: .3620 as". .3530 $52.3 3533 3533 :5 2 as, :3 559.8 z a: 2 .e as. a .238... sis 908 as no :8. «Reg. 2.. 8.. .9533 :3 a: .255 ...-5 Sai- Appendix VI: Mean Regression Coefficients in multiple regression models to estimate partial energetic coefficients. Multiple regression models for metabolizable and net energy intake were similar to those analyzed by Walter and Mao (1989). 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