r'.‘ '1' 1v. 7",. "u F... .,v.. n 15... 1. .1 J... . If. 1. I< 3. I .. A. 1.6mfl? “£.fi )9 .1. 3.5.3.202... . .. $132? way-1.9 mu, 1. .3... a vie; :5}... 42‘s(‘ :7 9:322: (9.. P . an... 3... .. (f 13. .35 I! Z ”H.131. Hum}! ififidnuwmwr . Illllllllllllllllllllllllllllllll 3 1293 01410 0477 This is to certify that the thesis entitled THE ASSOCIATION OF PREPARTUM NON-ESTERIFIED FATTY ACIDS AND BODY CONDITION WITH PERI PARTUM HEALTH PROBLEMS ON 95 MICHIGAN DAIRY FARMS presented by Paul Brian DYk has been accepted towards fulfillment of the requirements for ”.5. , Animal Science degree in Major rofessor Date /'/"‘”a 5/ 0-7639 MS U it an Affirmative Action/Equal Opportunity Institution LIBRARY Michigan State University 4. PLACE IN RETURN BOXto mouthi- chockout from your record. To AVOID FINES Mum on or baton date duo. DATE DUE DATE DUE DATE DUE THE ASSOCIATION OF PREPARTUM NON-ESTERIFIED FATTY ACIDS AND BODY CONDITION WITH PERIPARTUM HEALTH PROBLEMS ON 95 MICHIGAN DAIRY FARMS By Paul Brian Dyk A THESIS Submitted to Michigan State University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Department of Animal Science 1995 ABSTRACT THE ASSOCIATION OF PREPARTUM NON-ESTERIFIED FATTY ACIDS AND BODY CONDITION WITH PERIPARTUM HEALTH PROBLEMS ON 95 MICHIGAN DAIRY FARMS By Paul Brian Dyk Ninety-five dairy farms above Michigan DHIA average of 8760 kg of milk/cow/year were visited four times within a 6 week period. At each visit, a body condition score (BCS) and a blood sample were taken from each Holstein animal that was within 35 days of the expected date of parturition. Plasma from the blood sample was analyzed for non-esterified fatty acids (NEFA). Higher prepartum NEFA concentrations were associated with a higher incidence of dystocia, retained placenta, ketosis, displaced abomasum, and mastitis but not milk fever. Animals with higher BCS scores had a higher incidence of ketosis and displaced abomasum but not dystocia, retained placenta, milk fever, or mastitis. Prepartum NEFA concentrations were elevated in animals with higher BCS, and lower predicted transmitting ability for milk. BCS were lower in animals that had higher predicted transmitting ability for milk. Decreasing prepartum lipid mobilization may result in fewer peripartum health problems. To God, the Creator and Sustainer of All. iii ACKNOWLEDGMENTS This project would not have been possible without the advice, patience, and assistance of many people. I would first like to thank Dr. Michael VandeHaar for acting as my major professor. His guidance and insightful questions were very helpful throughout my M. S. program. A special thank-you goes to Dr. Roy Emery who was essential to the completion of this project and was always a great resource. I also thank my other committee members, Dr. Tom Herdt and Dr. Roy Fogwell, for serving on my committee. I thank Dr. Herb Bucholtz and Dr. Richard Cameron for assisting with the many farm visits. Thank-you to Jim Liesman for his statistical prowess and patience. Thank- you to Dr. Bal Sharma for his laboratory expertise and guidance. Thank-you to Erinn Dempsey, and Janice Rumph for their lab and computer help that was invaluable for the completion of this project. I also thank Brad, Randel, Christine, and Corey for their assistance on farm visits. Thank-you to my parents for their guidance and support throughout my education. Finally, thank-you Neva for your constant cheer and encouragement. iv TABLE OF CONTENTS LIST OF TABLES ........................................................................................................ vii LIST OF FIGURES ...................................................................................................... viii INTRODUCTION ........................................................................................................... 1 LITERATURE REVIEW ................................................................................................ 3 Relationship of parity and peripartum health problems .......................................... 3 Relationship of BCS and peripartum health problems ............................................ 3 Relationship of NEF A and peripartum health problems ......................................... 5 Plasma NEF A concentrations around parturition ....................................... 6 Causes of NEFA elevation during the last week prepartum ....................... 8 Plasma NEF A through Fatty Liver as a cause of health problems .............. 9 Other possible connections of NEFA to health problems ......................... 11 MATERIALS AND METHODS ................................................................................... 13 Farm selection .................................................................................................... 13 Farm visits ......................................................................................................... 13 Lab method for NEF A analysis ........................................................................... 14 Raw data editing and summarization ................................................................... 19 The Four Databases used for statistical analysis .................................................. 20 WT Database .......................................................................................... 21 WT&PTA.. Database .............................................................................. 21 NT Database .......................................................................................... 22 NT&PTA Database ................................................................................ 22 Statistical Analysis ............................................................................................. 23 Disease analyses using Cochran-Mantel-Haenszel Statistics ..................... 23 Analysis of relationship of Parity to Disease ............................................ 25 Analyses of relationship of BCS Group and NEFA Group to Disease ...... 25 Analysis of relationships of NEF A, BCS, PTA”, Herd, and Parity ........... 25 Analysis of twinning ............................................................................... 26 RESULTS ..................................................................................................................... 27 Database summary ............................................................................................. 27 Prepartum NEFA concentrations in plasma ......................................................... 27 Relationship of BCS, PTA“, Parity, Herd and Day prepartum to plasma NEFA .. 29 Relationship of PTA”, Parity, Herd and Day prepartum to BCS ......................... 34 Time frame of diseases ....................................................................................... 35 Association of Disease and Parity ....................................................................... 37 Association of Disease and NEFA Group among Parities .................................... 38 Association of Disease and NEF A Group within Parity ....................................... 39 Association of BCS Group and Disease Incidence .............................................. 41 Association of PTA... and Disease ....................................................................... 44 Results from twin analysis .................................................................................. 45 DISCUSSION ............................................................................................................... 48 Effects of Parity on NEFA, BCS and Disease ..................................................... 48 Relationship of NEF A concentration and Disease ............................................... 50 Relationship of BCS and Disease ........................................................................ 52 Causes of elevated prepartum plasma NEFA ...................................................... 53 Effect of PTA.I on disease, BCS, and NEFA ...................................................... 53 Potential problems with this study ...................................................................... 54 Practical recommendations from this study ......................................................... 55 SUMMARY & CONCLUSIONS .................................................................................. 58 APPENDICES .............................................................................................................. 59 Appendix A ........................................................................................................ 59 Appendix B ........................................................................................................ 60 Appendix C ........................................................................................................ 71 Appendix D ........................................................................................................ 73 Appendix E ........................................................................................................ 75 BIBLIOGRAPHY ......................................................................................................... 79 LIST OF TABLES Table 1. Factors affecting NEFA in plasma at week -2 and week -1 (NT Database) ........ 31 Table 2. LS Means for NEFA concentration by parity BCS, and PTA... .......................... 32 Table 3. Factors affecting NEF A at week -2 and week -1 (NT &PTA... Database) ........... 33 Table 4. Effect of PTA... Group and parity on BCS for the 2 weeks prepartum. PTA... and parity had a significant effect (P<.Ol) on BCS. ....................................................... 34 Table 5. The association of disease incidence and NEF A Group by parity ...................... 40 Table 6. The association of disease incidence and BCS Group by parity. ....................... 43 Table 7. Plasma NEFA and BCS in cows that did and did not have twins ....................... 45 vii LIST OF FIGURES Figure l. Periparturient DMI and plasma NEF A concentrations of multiparous cows (adapted from Grummer, 1993) ................................................................................ 9 Figure 2. Layout of nricrotiter plate for each plasma NEFA assay. Working standards were in Column 1, internal standards were in wells C12 to H12 and samples were in remaining wells. ..................................................................................................... 17 Figure 3. Plasma NEFA in NT Database. Each sample from each cow was expressed as percent of the average of all animals on the same day prepartum ............................. 24 Figure 4. Plasma NEF A concentration before parturition averaged for animals in WT Database. ............................................................................................................... 28 Figure 5. Plasma NEFA concentration before parturition by parity in WT Database. ...... 29 Figure 6. Number of cases of mastitis, ketosis, and displaced abomasum in the first 21 days after calving. .................................................................................................. 36 Figure 7. Incidence of disease by parity. ......................................................................... 37 Figure 8. Disease incidence within NEF A Group across parities ..................................... 38 Figure 9. Incidence of disease by BCS Group across parities ......................................... 42 Figure 10. Incidence of disease in animals (n=1655) after giving birth to single or twin calves ..................................................................................................................... 46 Figure 11. Incidence of disease in parity 3+ (n=63 8) after giving birth to single or twin calves ..................................................................................................................... 47 Figure 12. Relationships in the present study and proposed mechanisms for these relationships. .......................................................................................................... 57 Figure A. 1. Initial questionnaire sent to farms ............................................................... 59 viii Figure B. 1. First version of nutrition and management sheets ........................................ 60 Figure C. 1. First version of health sheet given to farmers .............................................. 71 Figure C.2. Second version of health sheet given to farmers .......................................... 72 Figure D.2. Sheet 2 for NEFA analysis .......................................................................... 74 Figure B. 1. Program for CMH Analysis ........................................................................ 75 ix INTRODUCTION The time around calving is a critical period in the life of a dairy cow. The initiation of lactation, the stress of calving, and a high incidence of health problems make it a key transition phase in the life of a dairy cow. There is great economic incentive to make this transition period smooth and free of problems. Currently, peripartum health problems result in losses of 28850 million/year in Michigan due to increased veterinary costs and loss of milk production (Ferris and F ogwell, 1984). A challenge faced by the dairy animal in the last couple of weeks prepartum is maintaining a positive nutrient balance. Poor nutrient balance may result fiom a combination of decreased feed intake in the last couple weeks prepartum and increased energy requirements due to lactogenesis and increasing fetal needs. Prepartum non-esterified fatty acids (NEFA) were used in this study as an indicator of nutrient balance. When a cow consumes less energy than required, body fat is mobilized and concentration of plasma NEFA increases. Many of these NEFA are taken up by the liver and reesterified to TG. Excess TG accumulation results in fatty liver, which may cause more health problems such as ketosis and displaced abomasum after calving. In addition, poor nutrient balance as indicated by elevated NEFA may suppress the immune system and thus lead to more health problems such as mastitis. 2 Body condition score, which is a measure of body fatness in the dairy animal, was also examined in this study. High BCS has been reported to reduce feed intake and increase the incidence of health problems such as ketosis and mastitis. The hypothesis of this study is that elevated concentrations of NEF A in plasma and higher BCS before calving will increase the incidence of peripartum health problems in dairy cattle. Our specific objectives were: 1) To determine if elevated prepartum NEF A concentrations are associated with more health problems in the first 60 days after calving. 2) To determine if higher BCS is associated with more health problems in the first 60 days after calving. 3) To determine what factors affect NEFA concentration and BCS in dairy cattle before calving. The specific health problems examined were: dystocia, retained placenta, milk fever, ketosis, displaced abomasum, and mastitis. LITERATURE REVIEW Relationship of parity and peripartum health problems There is a significant relationship between disease and parity. As shown already in 1923 (Sjollema and Van Der Zande), and again in 1956 (Shaw), the incidence of ketosis increases as parity increases. In Swedish Red and White and Swedish F riesian cattle, there was an increase in retained placenta, ketosis, and mastitis as parity increased (Emanuelson et al., 1993). In another Scandinavian study with Finnish Ayrshire cattle, the incidence of dystocia, milk fever, and ketosis was greater during the second lactation than the first lactation (Mantysaari et al., 1991). Relationship of BCS and peripartum health problems Body condition score (BCS) is a measure of subcutaneous lipid stores based on a visual appraisal (Wildman et al., 1982). Domecq et al. (1994) showed that BCS was positively correlated (ranging from .49 to .73) to ultrasound measurements of subcutaneous fat at the lumbar, thurl, and tailhead regions. Otto et al. (1991) did a carcass study to evaluate the correlation of BCS and fat content of the carcass. Afier slaughter, 9th to 11th rib sections were analyzed for ether extract content. Each unit 4 increase of body condition score was associated with a 12.7% increase in ether extract. Waltner et al. (1994) slaughtered 23 animals and showed that the percent of empty body fat (does not include fat fi'om internal organs) could be accurately estimated (r2=.7 8) fi'om body weight and body condition score. Based on these ultrasound and carcass studies, BCS is reliable as a relative indicator of body fatness in dairy cattle. The link between overconditioned animals and disease has been quoted by some individuals; however, the evidence is not conclusive. In an often referenced paper, Fronk et al. (1980) conclude that the overconditioned animals in their study had more health problems; however, there is no statistical analysis to back this claim. In addition, there are no clear descriptions of diseases and there is no indication as to whether cases of a disease were counted twice if they occurred in one animal. Fronk et al. conclude that there are more cases of ketosis, milk fever and mastitis in overconditioned animals but the limited number of cows (44 animals) in this study make it difficult to extrapolate this to the Holstein population. A review by Morrow (1975) on “Fat cow syndrome” says that overconditioned animals have a higher incidence of milk fever, ketosis, displaced abomasum, indigestion, mastitis, etc.; however, the paper again does not give evidence to support this claim. Although these two papers are often cited as the basis for the idea that overconditioned animals have more health problems, they clearly should not be. More recently, Ruegg (1995) showed that higher BCS at calving was not associated with disease in 429 animals in 13 herds. Gearhart et al. (1990) reported that overconditioned animals (>=4 on a scale of 1 to 5) did not have a higher incidence of ketosis or displaced abomasum in 561 animals. 5 Despite a lack of evidence of a direct link between BCS and disease, the mechanism for such a link may be through the effect of BCS on DMI and thus on energy balance. Some investigators have shown lower DMI in overconditioned animals (Garnsworthy and Topps, 1982; Treacher et al., 1986) and concluded that this may result in more health problems; however, Holter et al. (1990) did not see lower DMI in overconditioned animals. Grummer sums up the effect of BCS on intake quite well in his 1993 review of ruminant lipid metabolism: “The importance of body condition as a determinant of prepartum feed intake has not been examined critically.” Relationship of NEFA and peripartum health problems An important indicator of whether or not a cow will develop a peripartum health problem may be the concentration of plasma non-esterified fatty acids (NEF A) in the prepartum period. The concentration of plasma NEFA is proportional to the rate of lipid mobilization in the cow, and lipid mobilization is proportional to the shortfall of dietary energy to meet an animal’s requirements (Mills et al., 1986). Plasma NEFA are taken up by the liver proportional to their concentration in plasma and the rate of blood flow to the liver (Bell, 1980). Because the ruminant liver does not export very low density lipoproteins (VLDL) in significant quantities, uptake of NEF A may lead to fatty liver. Fatty liver has been connected to ketosis which may indirectly lead to other health problems such as displaced abomasum (Curtis et al., 1985). However, fatty liver may not be the only mechanism whereby elevated NEF A could be associated with more health 6 problems. A higher concentration of plasma NEFA is an indication of negative energy balance or poor nutrient balance, which may cause a general suppression of the immune system and consequently lead to more health problems such as mastitis. Plasma NEFA concentrations around parturition Prepartum plasma NEF A are the focus of my study, not postpartum plasma NEFA, because prepartum plasma NEFA are more likely to cause fatty liver. In the prepartum period, some plasma NEFA will be used by tissues as an energy source while the rest will be taken up by the liver. Thus, if plasma NEF A concentrations are high, triglycerides will accumulate in the liver and eventually result in “fatty liver”. After calving, however, if plasma NEF A concentrations are high, the mammary gland will remove much of the plasma NEF A for use in milk synthesis. This is supported by reports that the liver is already infiltrated by TG at the time of calving (Grummer et al., 1993; Gerlofi‘ et al., 1986). Immediately around the time of calving (+/- 24 hrs), plasma NEF A may increase from 300 M to over 900 M (Bertics et al., 1992; Studer et al., 1993). Four possible causes for this increase are: l) a decreased intake of energy, 2) an increased energy need by the animal or fetus, 3) hormonal shifts related to lactogenesis and calving, or 4) a combination of these possibilities. Although DMI drops over the last 10 days prepartum, the drop 1 day before calving likely is not the cause of high NEF A at parturition, because the NEFA surge occurred even when cows were force fed through a rumen cannula to 7 maintain DMI (Bertics et al., 1992). The possibility that the surge of plasma NEF A is caused by a sudden need for more energy associated with lactogenesis seems more likely, but there is little evidence in the literature to support or refute this hypothesis. Perhaps the most likely cause of the NEFA surge at calving may be the increase in plasma epinephrine or norepinephrine occurring around parturition (Grummer, 1993). Finally, the increase in NEFA at calving is probably caused by a combination of these factors. However, the possibility that this large increase in NEF A on the day before calving could by itself cause fatty liver seems unlikely. In addition to the NEFA surge at calving, a moderate increase in NEFA occurs over the last week or two before calving (Grummer, 1993). And in fact, this moderate increase over the last week seems more important than the surge at calving. Drenching animals with propylene glycol, a glucose precursor, once daily fiom about 10 days prepartum until parturition significantly lowered plasma NEFA concentrations (234 M vs 403 uM) from 6 to 1 days prepartum compared to those of control animals (Studer et al., 1993). However, NEFA increased similarly on the day before calving in both drenched and control animals, and DMI decreased similarly in both groups beginning 10 days before calving. Irnportantly however, drenched animals had 32% less TG in liver at 1 day after calving. Thus, the apparent decrease in the rate of lipolysis as indicated by plasma NEFA for 1 week prepartum resulted in a decrease in liver TG concentration. This indicates that the NEFA surge immediately around calving does not account for all the TG infiltration and subsequent problems. Precisely how many days before calving plasma NEF A concentration may be important has not been determined. 8 Causes of NEFA elevation during the last week prepartum The increase in NEFA concentration during the last week before calving may be caused by the general decrease in DMI observed over the last 2 weeks (Figure 1). In a study by Bertics et al. (1992), animals were force fed through a rumen cannula to maintain DMI prior to calving. In control animals, liver TG increased 227% in last 17 days of gestation; however, the increase was only 75% in force-fed animals, which suggests that maintaining DMI reduces TG infiltration of the liver but does not eliminate it. NO difi'erences in plasma NEF A were observed between the two groups but authors point out that there was a tremendous amount of variation between cows so that they were unable to statistically detect a difference. In both groups, NEFA rose exponentially within a day of calving. The cause of the drop in DMI around calving is unclear but may be related to space in the abdominal cavity, hormonal shifts occurring around calving, or the stresses of calving and lactogenesis and the management changes associated with them. NEFA (uM) *NEFA ‘hDMI ~~ 10 Days relative to calving Figure 1. Periparturient DMI and plasma NEF A concentrations of multiparous cows (adapted from Grummer, 1993) Another possible reason for the increase in NEFA around calving may be the increased needs of the animal and fetus. As the fetus continues to grow throughout the dry period, more energy may be needed for its maintenance and development. In addition, as the mammary gland prepares for the upcoming lactation in the last week of gestation, there may be an increased need for energy. Currently the National Research Council (NRC) does not account for these possible changes in energy requirements in their recommendations for the dry cow (NRC, 1989). Plasma NEFA through Fatty Liver as a cause of health problems A fatty liver is one that has become infiltrated with triglycerides. The liver may take up a minor amount of TG from chylomicra in blood. In sheep, 10% of the plasma 10 pool of chylomicra is removed by the liver and 20% is removed in dogs (Bruss, 1993). Thus, in a dry cow fed a typical diet (<5% fat), chylomicra likely are a minor source of liver TG. Because chylomicra are only a minor source of liver TG, a fatty liver is caused by an increase of TG that come from the reesterification of NEFA There is very little fatty acid synthesis within the ruminant liver, therefore the ruminant TG are formed from plasma NEFA. Uptake of plasma NEF A by the liver is proportional to the NEFA concentration in the blood (Bell et al., 1980) with a removal rate of 7-25% of the NEFA presented to the liver (Emery et al., 1992). NEFA in the liver can be completely oxidized to C02, incompletely oxidized to ketone bodies, or reesterified to TG (Bruss, 1993). Because the ruminant liver does not export VLDL in appreciable amounts, the balance of NEFA uptake and NEFA oxidation in the liver determines the degree of TG accumulation in the liver. This leads to the conclusion that NEFA in plasma is the best indicator of the accumulation of liver fat (Reid and Roberts, 1983; Roberts et al., 1981). The mechanism whereby fatty liver might afi‘ect peripartum health is not clear, except in the case of ketosis, because an increase in liver lipids is considered part of the etiology of ketosis (Baird, 1982; Littledike et al.,1981). The best evidence for a link between ketosis and fatty liver is the work conducted at Iowa State University using an induced ketosis model (V eenhuizen et al., 1991). To induce ketosis, animals were fed at restricted intake and fed 1,3-butanediol as a source of ketone bodies. Induction of ketosis began 15 days postpartum and clinical ketosis occurred by 45 days postpartum. In animals with induced ketosis, liver triglycerides on a wet weight basis increased fiom 2% 1 1 at 5 days after calving, to 10% at 14 days before ketosis occurred. The idea that fatty liver precedes ketosis is supported by findings that showed animals that developed ketosis during lactation already had a fatty liver at 1 day after calving (Grummer, 1993; Baird, 1982) One possible means by which fatty liver may cause ketosis is through impaired liver function (Mills et al., 1986). Impaired liver function is indicated by mitochondria that seem malformed and cristae that are disordered and less distinct in the cells of a fatty liver (Reid and Collins, 1980). Increased fat also decreases difi‘usion of cell metabolites through the cell (Bruss, 1993 ), decreases the activity of gluconeogenic enzymes (Mills et al., 1986), and decreases liver glycogen concentrations (Young et al., 1990). Perhaps these changes in glucose metabolism are key in the etiology of ketosis. Other possible connections of NEFA to health problems Displaced abomasum may occur more frequently in animals that have ketosis (Curtis et al., 1985; Markusfeld, 1986), but whether ketosis causes displaced abomasum or if displaced abomasum causes ketosis, or both are caused by some other phenomenon is not known. When ketotic animals reduce their intake, gut motility may be decreased, which could result in displaced abomasum. On the other hand, an animal with a displaced abomasum also would reduce intake and consequently might then become ketotic. In any case, it seems likely that if prepartum NEFA are elevated in animals that have ketosis, then animals that have displaced abomasum will also have higher prepartum NEFA. 12 Elevated prepartum plasma NEF A may also be related to a high incidence of some peripartum health problems because high NEF A indicate that an animal is in poor nutrient balance. Animals that are in poor nutrient balance may have a suppressed immune system (Rhoads, 1980; Keusch, 1981; Dreizen, 1979; Gross and Newbeme, 1980). The immune system is suppressed around parturition (W eigel et al., 1992), but whether nutrition plays a role in this suppression is not known. Plasma cortisol which is elevated around parturition (Horst and Jorgensen, 1982) and suppresses immune function (Burton et al., 1995; Batcman et al., 1989; Roth, 1983), is increased during long-term malnutrition (Dwyer and Stickland, 1992). Ifan animal is under stress as in the case of malnutrition, perhaps the associated immunosuppression is a result of elevated of cortisol (Elvinger et al., 1992). An animal with a suppressed immune system is more susceptible to mastitis (Weigel et al., 1992). In addition, a suppressed immune system may cause a higher incidence of retained placenta (Cai et al., 1994 and Gunnink, 1984). The calf and the associated fetal membranes are immunologically foreign to the animal, and suppression of the immune system during pregnancy prevents the rejection of the calf (Billingham and Beer, 1984; Jacoby et al., 1984). However after calving, the placenta and fetal membranes must be rejected. If the immune system is suppressed at the time of calving, proper immunological rejection and expulsion of these foreign tissues may not occur. If these tissues are not expelled within 24 hours after calving, a case of retained placenta is said to have occurred. If poor nutrient balance causes immunosuppression, then a positive correlation of plasma NEFA and the incidence of mastitis and retained placenta might be expected. MATERIALS AND METHODS Farm selection On June 19, 1993, letters were sent to over 300 farms across Michigan to solicit their involvement in a dry cow study. Letters were only sent to farmers that were enrolled in the Dairy Herd Improvement Association (DHIA) and had a current herd average above the Michigan DHIA average of 8760 kg (19300 lb.) of milk per cow per year. The farmers were asked to fill out and return a questionnaire (Appendix A, Figure A. 1.) if they wanted to participate in the study. Of the over 300 letters sent out, 118 questionnaires were returned. Of these, 104 farms were visited. Farm visits The 104 farms were divided between the investigators Roy Emery (42), Paul Dyk (3 2), Herb Bucholtz (23 ), and Richard Cameron (7). Each investigator was responsible for collecting and recording information on the assigned farms. Each farm was visited 4 times within a 6 week period with a minimum of 6 days between each visit. The farm visits occurred between October 27, 1993, and January 25, 1995. At the first visit, the investigator recorded management and nutrition information on standardized sheets (Appendix B, Figure B. 1.). However, for farms (73 of the 104 farms) visited for the first time after May 1, 1994, an improved version of this sheet which was more specific was used (Appendix B, Figure 3.2.). 13 14 At the first visit, all Holstein cows and heifers that were within 5 weeks of calving were identified and restrained. At some farms, identification or restraint of some animals, usually heifers, was not possible; these animals were excluded fi'om the trial. A body condition score (BCS) was determined on a scale of 1 to 5, with 5 being very fat and 1 being very thin (Wildman et al., 1982). Prior to the initiation of the trial, investigators met to standardize their body scoring technique using a chart fiom Elanco Products Company (Indianapolis, IN, USA). In addition to BCS, blood was sampled via a tail vessel. Samples were put into ice within 15 minutes, brought back to the lab, and centrifuged at 3000 rpm for 15 minutes. Plasma was siphoned Off and put into labeled plastic tubes and stored at -20 °C. At the conclusion of the first visit the farmers were given sheets to record health information on animals involved in the study. These sheets were also revised (after the first 31 farms) to improve recording of dates for diseases (compare Appendix C, Figures Cl. and C2). At the second, third, and fourth visit, BCS was evaluated and blood was sampled from animals within 5 weeks of expected date of calving. The animals on the second, third and fourth visit included animals from the previous visit that had not calved, and any other animals that were within 5 weeks of expected date of calving. Changes in management or nutrition were also recorded. Lab method for NEFA analysis Samples were analyzed for NEF A using a commercially available kit (NEFA-C kit, Wako Chemicals USA, Richmond, VA) with modifications by McCutcheon and Bauman 1 5 (1986), Sechen et al. (1990), and Johnson and Peters (1993). The kit was an enzymatic, colorimetric test, where NEFA in the presence of adenosine triphosphate (ATP), coenzyme A (COA) and acyl-COA synthetase (ACS) forms Acyl-COA and the by-products adenosine monophosphate (AMP) and pyrophosphate (PPi). Acyl-COA is then oxidized by acyl-COA oxidase (ACOD) to produce 2,3-trans-enoyl-COA and hydrogen peroxide (HzOz). H202 is combined with 3-methyl-N-ethyl-N-(B-hydroxyethyl)—aniline (MEHA), 4- aminoantipyrine and peroxidase (POD) to give the final purple product which is a quinone. This final product can be measured colorimetrically at 550 nm. The chemical basis is represented by the following reactions: NEFA + ATP + CoA AC5 > Acyl-CoA + AMP + PPi Acyl-COA + 02 ACOD > 2,3-trans-enovl-COA + H202 2H202 + MEHA + 4-aminoantipyl'ine __.POD 121:“ P538201; )(Purple Qumone) The NEFA kit included the following: 1) 6 vials of Color Reagent A (CRA) - ACS (3 U/vial), AOD (30 U/vial), CoA (7 mg/vial), ATP (30 mg/vial), 4-aminoantipyrine (3 mg/vial) 2) 1 bottle of CRA diluent - phosphate buffer (pH 6.9, SOmM), magnesium chloride (3000 OM), surfactant, stabilizer 3) 6 vials of Color Reagent B (CRB) - ACOD (132 U/vial), POD (150 U/vial) 4) 1 bottle of CRB diluent - MEHA (1200 DM), surfactant 5) NEFA Standard - Oleic acid (1000 UM), surfactant, stabilizers 16 Each vial of Color Reagent A was diluted with 10 mL of Color Reagent A diluent and 13.3 mL of phosphate buffer (50 mM, pH 6.9) and stored at 4°C. Each vial of Color Reagent B was diluted with 20 mL of Color Reagent B diluent and 33.3 mL of phosphate bufl‘er and stored at 4°C. Working standards (1000, 500, 250 and 0 OM) were prepared by diluting the NEFA standard provided in the kit with phosphate buffer. The NEFA analysis used 96—well, flat-bottomed, polystyrene microtiter plates (Corning Glass Works, Corning, NY). Five ILL of plasma or standard was pippetted into the wells using a positive displacement pippetter. Figure 2 shows the layout of each plate in the analysis. The left side (A1 to H1) was used for the working standards while the bottom right cells (C12 to H12) contained internal standards of the analysis. These internal standards represented one animal that had low plasma NEFA (Cow A or Cow C) and one animal that had high plasma NEFA (Cow B or Cow D). The internal standards were used as a check on intra-assay and inter-assay variation; the values from the internal standards were not used to adjust NEFA concentrations. All standards were pippetted after all the plasma samples had been pippetted. Plasma samples were pippetted into the plate in duplicate starting at well A2, proceeding to H2, then A3 to H3, A4 to H4, etc. Plates were placed in 4°C while other plates were being pippetted. .maoB meg—=2 E 803 moans... v5 2: 3 S 0 £03 5 083 3395... 3835 J Sea—co E 203 3553» wee—53 $83 2.75 and 53.25 c) Medium BCS Group - BCS>3.25 and BCS<4 d) High BCS Group 4 - BCSZ4 For all analyses with PTA... the following PTA... Groups were used: a) Low PTA... Group = PTA... 2-174 lb. and <826 1b., b) Medium PTA... Group = PTA... 2826 lb. and <1826 1b., and c) High PTA... Group = PTA... 21826 1b.. NEFA values could not be categorized the same way because NEFA values were strongly affected by days prepartum. To compare NEFA values, each plasma NEFA value for each animal was expressed as a percentage of the average NEFA for all animals from the same day prepartum (Figure 3). If an animal had two samples from the last 2 weeks, the average of these percentages was used as the value for that animal. Three NEFA groups were then formed: 24 a) Low NEFA Group - cows with average NEFA percent below 75. b) Medium NEFA Group - cows with average NEFA percent between 75 and 125. c) High NEFA Group - cows with average NEFA percent above 125. Mix .41 NEFA in plasma (uM) -14 -12 -10 -8 -6 -4 -2 0 Days Prepartum Figure 3. Plasma NEFA in NT Database. Each sample from each cow was expressed as percent of the average of all animals on the same day prepartum. 25 Analysis of relationship of Parity to Disease Using the NT Database, the relationship of parity to disease was studied with CMH statistics in SAS. NEFA Group and BCS Group were controlled in one analysis and not controlled in the subsequent analysis. Analyses of relationship of BCS Group and NEFA Group to Disease To look at the relationship of BCS Group and NEFA Group to disease incidence, the NT Database was used. When analyzing the relationship of NEF A Group to disease within parity, BCS Group was controlled; for the association of NEF A Group to BCS across parities, BCS Group and parity were controlled. The association of BCS to disease incidence across parities was also analyzed, controlling for NEFA Group and parity. (See Appendix E, Figure B. l. for SAS program.) To look at the relationship of PTA... Group and disease incidence, the NT&PTA... Database was used. When analyzing the relationship of PTA... to disease, NEFA Group, BCS Group, and parity were controlled; the relationship was also analyzed controlling only for NEF A and BCS Group. Finally the relationship of PTA... and disease incidence was analyzed, controlling for no other factors. Analysis of relationships of NEFA, BCS, PTA.., Herd, and Parity To look at the effect of BCS group, herd and parity on NEFA, the NT Database was analyzed using the GLM (General Linear Models) option in SAS. Week -1 and week -2 prepartum were analyzed separately. The concentration of plasma NEFA was used as the dependent variable, and BCS Group, herd, and parity as independent variables. Day 26 prepartum was used as a covariate because of the sharp rise in plasma NEFA at calving. To look at the efl‘ect of PTA... Group on NEFA, the same model was used except PTA... Group was used as additional independent variable, and the NT&PTA Database was used. To look at the effect of parity and herd on BCS, the GLM option in SAS was used with the NT Database. BCS was used as a dependent variable with herd and parity as independent variables. The effect of PTA. Group on BCS was studied using the NT&PTA Database and the same model except PTA... was put in as an additional independent factor. Analysis of twinning To look at the effect of twins on NEF A and BCS, the WT Database was used. When the effect of twins on NEF A was analyzed the GLM procedure in SAS was used. NEF A was the dependent variable, and BCS Group, herd, parity, and twins were put in as independent variables. When the effect of twins on BCS was analyzed, BCS was used as the dependent variable, and parity, twins, and herd were independent variables. To look at the relationship of PTA. and twins, the CMH option in SAS was used on the WT&PTA Database. Finally, to determine if disease incidence was higher in animals with twins, the WT Database was analyzed using the Chi-Square analysis of SAS. RESULTS Database summary Of the 104 farms visited, only 95 farms were used in the data analyses for this thesis. The other farms were not used because health sheets were not returned or because no animals fit the criteria for our analysis. The raw health database contained 2577 animals. Of these, 26 did not have calving dates, 192 did not have any blood samples, 119 could not be linked to a DHIA cow identification number, 26 animals did not meet parity criteria, and 19 had insuflicient or incorrect DHIA information, such as multiple animals with identical DHIA numbers. Of the remaining 2195 animals, 1655 had at least one blood sample in the last 2 weeks (day -14 to day -1) prior to parturition. These 1655 cows were the base of the analyses (WT Database) for this thesis. Ninety-nine of these animals had twins and were not used for analyses involving single births (NT Database). Of the remaining 1556 animals, 1093 (z70%) had valid PTA... values (WT &PTA... Database). Prepartum NEFA concentrations in plasma In analyzing the raw data, plasma NEFA concentration did not vary until about 2 weeks before calving (Figure 4). From -14 to -4 days prepartum, plasma NEFA concentration increased fi'om 300 1AM to 400 M. Then from day -4 to day 0, plasma 27 28 NEFA concentration doubled to 800 M. Plasma NEFA concentration was lowest for parity 2 animals but increased significantly in the last days before calving for all parities (Figure 5). 900 800 700 g...) 500 § NEFA in plus or» 8 100 UU‘U'TYYf1 VVVVVVVVVVVVVVVVVV -35 -28 -21 -14 -7 0 Figure 4. Plasma NEFA concentration before parturition averaged for animals in WT Database. 29 900 800 +1 1234 les 700 ( sump ) -o- 2 (1545 samples) v 600 + 3+ (1977 samples) I’m. /\ . / €w“~ ’ ............................ -14 -7 0 Figure 5. Plasma NEF A concentration before parturition by parity in WT Database. Relationship of BCS, PTA... Parity, Herd and Day prepartum to plasma NEFA The efl‘ects of parity, herd, BCS Group, and day prepartum on the concentration of NEFA in plasma were examined with the GLM procedure in SAS. NEFA was the dependent variable and BCS Group, parity, and herd were blocks and number of days prepartum was used as a covariate to account for the increase in plasma NEFA as animals approached calving. Day prepartum was significant as a covariate only at week -1 (Table 1). Herd, parity, and BCS Group were significant at week -2 and week -1. It should be noted that the variation in NEFA associated with the term “herd” accounts for variation not only in on-farm management and diets, but also for interassay variation among NEFA assays, time of the year, and time the sample was taken relative to feeding. Prirniparous 30 animals had higher NEF A than the other parity groups while parity 2 animals had the lowest plasma NEF A in both week -2 and week -1 (Table 2). The lowest and highest BCS Groups had the highest NEFA in plasma in both week -2 and week -1 (Table 2). In another analysis, the GLM procedure was used with the NT&PTA... Database. Again, NEF A was the dependent variable. Parity, BCS Group, PTA... were used as blocks and day prepartum was used as a covariate. For week -2, PTA... was not significant in the model (Table 3). At week -1, the means for PTA“ showed the same trend as week -2 (Table 2) and approached statistical significance at P=.09 (Table 3). In this model, BCS group was not significant at week -2 or week -1; possibly because there were fewer animals in the dataset. 31 Table 1. Factors afl‘ecting NEFA in plasma at week -2 and week -1 (NT Database) Source Degrees of Type 111 SS Mean Square Probability Freedom Week -2 Days prepartum 1 1551 1551 0.8398 Lactation 2 602366 301183 0.0004 Herd 94 18650324 198408 0.0001 BCS Group 3 320492 106831 0.03 82 Lactation*BCS Group 6 284899 47483 0.2776 Error 957 36318777 37951 Total 1063 56178409 Week -1 Days prepartum 1 4179062 4179062 0.0001 Lactation 2 1773207 886604 0.0001 Herd 94 26457305 281461 0.0001 BCS Group 3 587288 195763 0.0650 Lactation*BCS Group 6 467257 77876 0.4503 Error 1035 83845951 81011 Total 1141 117310070 * Probability of a greater F value occuning by chance 32 Table 2. LS Means for NEF A concentration by parity BCS, and PTA... Week -2 Week -1 n NEFA n NEFA (LSMeans) (LSMeans) Effect of Parity Parity 1 304 338 360 442 Parity2 351 244 335 319 Parity 3+ 409 297 447 425 Effect of BCS Very Low BCS 102 312 107 440 Low BCS 246 274 259 353 Medium BCS 448 270 493 374 High BCS 268 317 283 415 Eject of PTA Low PTA 183 31 1 188 426 Medium PTA 47 5 287 51 l 371 High PTA 100 272 106 3 52 33 Table 3. Factors afl‘ecting NEF A at week -2 and week -1 (NT&PTA... Database) Source Degrees of Type IH SS Mean Square Probability Freedom Week -2 Days prepartum 1 829 829 0.8841 Parity 2 663066 331533 0.0002 Herd 82 13871243 169162 0.0002 BCS Group 3 151591 50530 0.275 PTA Group 2 80170 40085 0.3585 Error 667 26020052 3901 1 Total 757 40786951 Week -1 Days prepartum 1 1867329 1867329 0.0001 Parity 2 1901948 950974 0.0001 Herd 84 18146779 216033 0.0001 BCS Group 3 190283 63428 0.4925 PTA Group 2 373 92 18696 0.093 1 Error 712 56254902 79010 Total 804 78398633 * Probability of a greater F value occurring by chance 34 Relationship of PTA.., Parity, Herd and Day prepartum to BCS To look at the effect of PTA..., parity, and herd on BCS, the GLM procedure in SAS was used with BCS as the dependent variable. For one analysis the NT&PTA Database was used with PTA... Group, parity, and herd as blocks (Table 4), all of which were significant in the model (P<.01). Animals in the Low PTA... Group had significantly higher BCS than animals in the other PTA... Groups. In a second analysis, the NT Database was used with BCS as the dependent variable, and parity and herd as blocks; this analysis was done to take advantage of the higher number of animals in the NT database. In this analysis, herd and parity were significant (P<.01), and primiparous animals had the highest BCS at 3.60, then parity 3+ animals at 3.37, and finally parity 2 animals at 3.23. Table 4. Effect of PTA... Group and parity on BCS for the 2 weeks prepartum. PTAm and parity had a significant effect (P<.01) on BCS. n Mean BCS SEM (LSMeans) (LSMeans) Effect of PTA Group Low PTA Group 264 3.50 .037 Medium PTA Group 755 3.37 .023 High PTA Group 152 3.31 .045 Effect of Parity Parity 1 492 3.60 .024 Parity 2 525 3.23 .023 Parity 3+ 638 3.37 .021 35 Time frame of diseases At the beginning of the study, many farmers were not recording the date on which a health problem occurred. This led to a revision of the health sheet (Appendix C). Farmers recorded the date of a disease incident 62% of the time for retained placenta, 67% of the time for milk fever, 79% of the time for ketosis, and 83% of the time for displaced abomasum. These diseases were reported to have occurred within 60 days after parturition. Of the 192 cases of mastitis, 160 had a date reported. Of these 160 cases with reported dates, 136 occurred within the first 60 days and 102 occurred within the first 10 days. Using animals from the WT Database, ketosis, displaced abomasum, and mastitis occurred an average of 7 i 0.5, 12 i 0.7, and 47 i 4 days postpartum respectively (see Figure 6). 36 .328 bed as a an as a sagas“ 883% Ea £83 £22. co 83% 85:2 e 3:5 Esta—anommman 382222232222 a a a e n v m ~ o T N. m. S 2 om 3534 U mm §saB< 80235 I $88M I om mm ow mv mm 10 .roqrunN 37 Association of Disease and Parity Cochran-Mantel-Haenszel (CMH) statistics in SAS and the NT Database were used to examine the relationship of parity and disease. Primiparous animals had a significantly higher incidence of dystocia while multiparous animals had a significantly higher incidence of retained placenta, milk fever, ketosis, and general mastitis (Figure 7). Parity and disease were not significantly associated for displaced abomasum and peripartum mastitis. 20 I Parity 1 (n=486) DPari 2 n=480 P1‘<.01 ty ( ) P <_o 1 = 16 P2b24 hr ll, lletritis It, Cystic ovaries cars, lastitis ns, displaced abonasun D1, Ketosis Er, Laneness, Detected Beat near, 11 dates, Other) Docunent it can'has previously'been surgically treated tor Dl. List heat and.Breeding Dates and any drugs used as aids. 0r, attach torn lett with producer. a PIES! amiss! mu COMES m m ”503121108 no COWTS 0" rant: Figure B. 1. (cont’d) 65 DRY COU FEEDING FIELD TRIAL CHECK LIST Date: lane: DHIA: Recorder (s): 1. Fan Perspective A. Dry Group Average tine in dry group: (days) than do they go in? ihen do they go out? Is there more than 1 dry group (not including CU)? ihat deternines which dry group they are in? Are the heiters in a separate group than the dry cows or sinilar gestation? Other conents B. Close-Up Group Does it exist? Average tine in close-up group: (days) when do they go in? Uhen do they go out? Is it part or lactating group? Uhich one? Are the heiters in a separate group than the dry cows or sinilar gestation? Other conents C. Calving Pen Does it exist? L 1 Is it part or the Close-Up Group? when do they go in? Uhen do they go out? Other connents D. Fresh Cow Group Is there a separate group tor trash cows? Is it part of a lactating group? Which one? When do they go in? When do they go out? How are the fresh heifers handled? Other conents Figure B.2. Second version of nutrition and management sheets E. lilting Group Describe brietly the groups and when trash cows enter the groups Are the heifers handled ditterently than the cows? How? Other conents I. nanagenent Policies A.Reproductlon - tor cows on trial (ex. not heiter policy) 1. voluntary Felting'Period betore breeding (days) 2. Heat Observation a. how nany tines per day -average length of! observation (Iin) b. who observes c. when (tines at day) d. in conjunction with another activity? - what else are they doing? 3. Breeding policy a. AI (tarner or other) or natural b. what sign is breeding tine based.on (l) standing heat (2) other c.how'nany hours after heat are the cows bred __ d. policy tor anestrus cows (1-5) (1) vs: check and then.treatnent with (2) prostaglandins without vet check (3) GIRL-I without vet check (4) leave that or sell then (5) other e. any heat detection devices? - type: 8. Feed 1. Storage - Type 0: Storage and Aaount a. Bay - b. Haylage - c. Corn Silage - d. Other - 2. Anionic Salts: Are dry cows ted anionic salts? C. DST Is it currently being used? Eben did.BST use start? Chat is use based on? Have any cows on our trial received EST? Uhich cows? Figure B.2. (cont’d) 67 III. Grow Descriptions These descriptions are to be done for each group - dry. close-w, naternity pen, fresh cow and wilt cow. (Conbined grows need only be described once but this should be indicated). A. Grow lane 1. Housing a. Type (l-6) (l) Freestall (2) Covered nanure pack with access to outside lot Covered nanure pack with no access to outside lot Dry Lot - no cover Pen - size of pen (ft') Other b. Rooniness (l of cows/l stalls) (l of cows/pen) c. Quality (1) type of bedding (a-e) (a) straw (b) sand (01 paper (d) wood shavings (e) other (2) Cleanliness of resting areas (a-c) (a) very clean (nostly bedding) (b) noderate (soae Ianure in bedding) (0) unclean (lot of nanure in bedding) (3) Cleanliness of cows (a-c) (a) very clean (b) noderate (c) very dirty (4) General Condition or State of Repair (a-d) (a) excellent - well naintained facilities (no broken freestalls) (b) noderate to) poor - state of disrepair or inappropriate conditions (ex. very snall stalls for big heifers) (5) Floor Rating - (a-e) (a) grooved floor (b) very snooth cenent floor (c) rough ceaent (d) straw or nanure pack (e) other (6) Ease of novenent (access to food) (a-c) (a) very good - good cow flow. cows close to feed (b) noderate to) poor - probleas getting to feed, narrow alleys, great distance to feed Ifigunefi2.(conftD (7) Ventilation (a-c) (a) excellent (outdoors/open sidewalls) (b) questionable (closed barn) (c) poor (little air novenent) (8) Lighting __ (a-c) (a) very light (outdoors/open sidewalls) (b) noderate lighting (C) poor lighting - darn barn 2. Feeding a.Dunkspace (l-3) (l) lft or less/cow (2) l to 2 ft/cow (3) >2ft per cow b.Raised Bunk (l or 2) (l) 1ft or higher above level of cow's feet (above cow's hooks) (2) ground level c.Covered bunk - is bunk protected fron the elenents such as rain. snow. or sun? d.Uater availability (1) Plentiful (easy access and nunerous troughs) {2 noderate 3 Poor (linited access and troughs) e.Bunk nanagenent (a-e) (1) how often cleaned (a) twice per day (b) once per day (0) once every other day (d) every 3 days (e) other (2) how nany hours/day do cows have access to feed bunk (3) how nany hours7day is there feed in the bunk f. Tine of feeding (1) how nany tines per day cows fed (2) how nany tine per day is feed pusfid up to cows (3) what tines are cows fed (6an,6pn etc) g.'1‘ype of Ration (1-7) (1) Straight; True 11R. - one feed thoroughly nixed (2) TIER ad lib and linited hay (3) 111R restricted and ad lib bay (4) THR and grain separate (5) 'l'llR and grain and hay (6) Individuel Feeds Fed separately (7) Other h. Quality of Ration (1) Does the feed in front of the cows seen fresh? _ (2) Describe the particle sire. (a-c) (a) very course (b) noderate (c) very fine Figure B.2. (cont’d) 69 i.Conponents of Ration, anticipated consunption and actual consunption Ration sheets are acceptable but it should be double checked to see if the actual anount fed is the sane as what the ration sheet indicates. The following are sone of the feed values that we are interested in. (l) 'I'IIR and other feeds (not in 'I'llR) (a) constituents (b) individual values of individ. ingred i)lD!' or ADP (if possible) ii)’cCP iii)%UIP (if possible) iv)l!l v)Cation-Anion Values (if possible) vi)Vit!:. and Se (if possible) (c) total ‘l'lR values (d) anounr actually fed Ration details, anounts and connents for this grow. Peed sanples. or feed tags need to be ta_k_e_n of feed_s that have not been sanpled before end are not indiceted in the fegl sheets. Figure B.2. (cont’d) 70 on : o -- "a on onnu: . DRY COU FIELD TRIAL - BCS AID BLOOD SllPLIlG Date: Fern: Tine Sanpled: Grow l - Tine a Day Grow 1 last fed: Grow 2 - Tine a Day Grow 2 last fed: Grow 3 - Tine a Day Grow 3 last fed: Grow 4 - Tine 6. Day Grow 4 last fed: (Cows and heifers within 5 weeks of calving are sanpled.) Grow Cowl BCS Health Connents (ex. laneness) Sanples are to be on put ice innediately. Figure B.2. (cont’d) 208.3 8 52m 80% 530: we cone?» “CE 4.0 oSmE £56 8.6 .m wast... 122.! 0 £525. 71 moo—Ea 2 :03» 805 .28: mo :38? 983m NO “SEE Appendix D NEFA PLATE Pb R M I“ 1 2 8 4 5 4 'l 8 8 A ms 111' 15 71 14 78 15“ 1284 1447 1544 1.287 s: 82 a 82 82 n 82 82 um 11.04 m 11.04 1111404 1111404 110.404 1112804 I 1. 1.11! 13 11 14‘. 1544 1284 1441 1544 1187 82 82 82 82 82 82 82 82 11.04 11.04 11.04 11” 110404 11M 110.404 110104 C m 12. 15,5 153 111' 1287 14" 1552 1352 82 82 82 82 s2 s2 82 82 11,04 11.04 11.04 1111404 1111404 1111404 1111404 111304 I) ”I 12. 1285 15’ 111! 1281 14 “I 1552 1558 82 82 D 82 82 s: 82 82 11.04 11.04 11.04 114404 1111404 1111404 110.404 1112304 I ”I 1184 14” 15” 12. 1585 15” 12” 1.895 82 82 n s: 82 a 82 82 11.04 11.04 11” 1M 11I1404 11l1404 11mm 110504 I" 88 1284 14” 15” 12. 15,5 15” 1.2. 1395 82 82 82 82 82 s: 82 82 11.04 11.04 m 1111404 1111404 1.1/1404 1112804 1112304 0 0 1287 1447 1541 N8 14” 1541 1284 14” 82 82 82 82 82 82 82 11M 11’04 “H04 110404 1111404 1112904 1112304 I! 0 1287 1447 1541 N8 14” 1541 1284 14” 82 82 82 82 82 82 82 1.13.04 11’04 M04 11I1404 1111404 110804 110304 FHwanhphk 1119 . “WC"-tbphk harsh-unflAwnsdhd: I. ,. hslsdtbph. DI-hvwhqpnces-tut fmthwhkhwwhmtssbwuhsfli thrwnyh‘snbdthldbrw mummluafld: n. ,. bdsdtbph. hound-wen“? {mt-wihwwh-wunlwuuuhf thrwqfiisnwdtbflfiw Innofthhlm Figure D.l. Sheet 1 for NEFA analysis 73 15” 11M 15” 11 12 1541 1.418 82 82 um 110304 1541 1518 1.1/”04 11’304 1544CCC 1112304 1544 CIC 110304 1551 Cut: 11,304 1551 CHD um 1552 Cub 110504 1552 wal) 1112304 74 Figure D.2. Sheet 2 for NEFA analysis Appendix E ptions ps=63 ls=75 pageno=1; . ata one; infile'c:\proj\sapfld\JULY23 .prn'missover; pi=hooooocxx'; bc=‘iooorxroor'; input hdhia herd cowid $14. cowno @34 calve date9. date date10. bcs nefa pi $ @72 visit] date9. andate date10. da rp dyst twins ket mfmas60d died lact ptarnilk maled; daypp=date~calve; if lact>2 then lact=3; if bcs=0 then delete; if twins=1 then delete; if -14<=daypp<0 then output; . ata nefa; set one; keep daypp nefa; I. roc sort data=nefa; by daypp; I. roc means data=nefa noprint; by daypp; var nefa; output out=nefa mean=nefa r1=n min=min max=max range=range std=stdl skewness=skew kurtosis=kurtosis; *proc print data=nefa; . ata nefa; set nefa; keep daypp nefa; rename nefa=avnefa; proc sort data=one; by daypp; data one; merge one nefa; by daypp; pernefa=nefalavnefa* 100; proc sort data=one; by herd cowno lact; . roc means data=one noprint; by herd cowno lact; var pernefa bcs da rp dyst twins ket mf maled mas60d ptamilk; output out=two mean=pernefa bcs da rp dyst twins ket mf mas10d mas60d ptamilk; . ata two; set two; h=125; l=75; if bcs<=2.75 then bc='lLow_BC'; if 2.754 then bc='4High_BC'; if ptamilk=9999 or ptamilk<-200 then ptamilk=.; if -l74<=ptamilk<826 then pta=l; if 826<= tamilk=1826 then pta=3; if ptamilk=9999 or ptarnilk<-200 then pta=.; if pernefa>h then fagr='3_hfa'; else if pernefa