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DATE DUE DATE DUE DATE DUE MSU Is An Afflnnativo Action/Equal Opportunity Institution Walla-M ARBUSCULAR MYCORRHIZAL FUNGI ALTER PRODUCTIVITY AND MORPHOLOGY AND DECREASE STORAGE ROT IN SOLANUM TUBEROSUM UNDER HIGH INPUT CONDITIONS By Brendan Anthony N iemira A DISSERTATION Submitted to Michigan State University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Department of Botany and Plant Pathology 1996 ABSTRACT ARBUSCULAR MYCORRHIZAL FUNGI ALTER PRODUCTIVITY AND MORPHOLOGY AND DECREASE STORAGE ROT IN SOLANUM TUBEROSUM UNDER HIGH INPUT CONDITIONS By Brendan Anthony Niemira Arbuscular mycorrhizal (AM) fungi are ubiquitous soil fungi that form beneficial associations with the roots of most crop species, including potato (Solanum tuberosum). The AM spore population structure in agricultural soils devoted to potato production is influenced by the type of management employed (low-input vs. high-input), and, to a lesser extent, by the specific rotation used. Low-input management and complex rotations tend to foster a greater complexity and resiliency in the AM spore population than high-input management and simple rotations. In a greenhouse setting, the reproductive physiology of potato plants grown in the presence of AM inoculum is altered, resulting in increased production of minitubers, and a production shift in favor of smaller minitubers. Plants exposed to AM had longer stolons, increased total stolon length per plant, more uniform stolon development, and more tuber initiates per plant than plants grown in sterile medium. Minitubers produced in the presence of AM inoculum showed significantly increased resistance to F usarium sambucinum, an important potato storage dry rot. Four week old potato roots colonized by AM showed significantly reduced total activity of peroxidase, a defense related enzyme. Collectively, these data suggest that AM induce a systemic resistance response in potato during the earliest stages of their association. A given species’ propensity to establish AM associations is related to its capability to produce border cells (BC, formerly known as "sloughed root cap cells"). It is observed that strongly mycorrhizal families (e.g. Poaceae, Fabaceae) produce thousands of BC per root tip, moderately mycorrhizal families (e.g. Solanaceae, Amaranthaceae) produce dozens or hundreds of BC per root tip, and minimally or non-mycorrhizal families (e. g. Brassicaceae, Chenopodiaceae) do not produce BC. The mechanism of the role of BC and BC-produced compounds in the development of AM associations has not been determined. This dissertation is dedicated to my wife Meegan, whose constant and undiminishing love and support made this work possible. iv ACKNOWLEDGMENTS I would like to gratefully acknowledge Dr. Gene Safir, my major professor and friend, for his counsel and advice, and for his support and confidence; The other members of my committee, Dr. George Bird, Dr. Raymond Hammerschmidt and Dr. Muralee Nair, and also Dr. Richard Harwood, for their individual and collective assistance and expertise; The College of Natural Science and the Department of Botany and Plant Pathology at Michigan State University for their assistance and financial support; Don and Mary Kay Sklarczyk of Sklarczyk Seed Farms, Johannesburg, M1, for their extraordinary generosity of time and resources in support of my research; Butler Potato Farm, Crystal Falls, MI and Kitchen Potato Farm, Alba, M1 for their cooperative efforts; Dr. Mike Birney, Dept. Entomology, for his collaboration in the field, and Eric Netzloff, Sean O’Donnell, Sarah Toms, Todd Smith and Michelle Wisniewski for technical assistance; All of my friends (and debating partners), including, but not limited to, Dr. Steve Stephenson, Dr. Leadir Fries, Dr. Ayse Ozan, Laura Arriola, Virginia Baker, Sigrid Ewers, Richard Kaitany and Venu and Madhuri Yagallah. Particular thanks go to John and Olivia Alford, both of whom hold a special place in my heart, for their friendship and support; Finally, I would like to gratefully acknowledge my families, Thadeus and Helen Niemira, and Charles and Judi Stock, for their love and support, and most especially my wife, Meegan, to whom this dissertation is dedicated. vi TABLE OF CONTENTS List of Tables ............................................................ Page viii List of Figures ............................................................ Page ix Introduction . .............................................................. Page 1 Mycorrhizae ........................................................... Page 1 Germination . ....................................................... Page 2 Colonization ....................................................... Page 2 Host responses ....................................................... Page 3 Sustainable agriculture . ................................................ Page 4 Literature cited . ....................................................... Page 8 Chapter 1: Arbuscular mycorrhizal fungus spore populations and colonization of potato: crop rotation and input level as major factors. Abstract . ............................................................ Page 12 Introduction .......................................................... Page 13 Materials and Methods . .............................................. Page 15 High-input system ................................................. Page 15 Low-input system ................................................. Page 16 AM root colonization assay ....................................... Page 16 AM spore isolation and census ..................................... Page 16 Statistical analysis ................................................. Page 17 Results .............................................................. Page 17 High-input system ................................................. Page 17 Low-input system ................................................. Page 20 Discussion ............................................................ Page 30 Literature cited . ..................................................... Page 37 Chapter 2: Production of pre-nuclear minitubers of potato with peat-based arbuscular mycorrhizal fungal inoculum. Abstract . ............................................................ Page 41 Introduction .......................................................... Page 42 Materials and Methods . .............................................. Page 43 Experiment 1: minituber production ................................. Page 44 Experiment 2: stolon development and minituber initiation ............ Page 47 AM root colonization assay ....................................... Page 47 vii Statistical analysis ................................................. Page 47 Results .............................................................. Page 48 Experiment 1: tuber production .................................... Page 48 Experiment 2: stolon production, tuber initiation . ................... Page 53 Discussion ............................................................ Page 60 Literature cited . ..................................................... Page 65 Chapter 3: Post-harvest suppression of potato dry rot (Fusarium sambucinum) in prenuclear minitubers by arbuscular mycorrhizal fungal inoculum. Abstract . ............................................................ Page 68 Introduction .......................................................... Page 69 Materials and Methods . .............................................. Page 70 Storage rot: Research greenhouse ................................. Page 70 Storage rot: Commercial greenhouse ................................ Page 71 Root protein extraction and sample preparation ...................... Page 72 Total peroxidase assay ............................................. Page 72 AM root colonization assay ....................................... Page 73 Fusarium sambucinum challenge ................................... Page 73 Statistical analysis ................................................. Page 73 Results .............................................................. Page 74 Storage rot: Research greenhouse . ................................. Page 74 Storage rot: Commercial greenhouse ............................... Page 74 Root protein total peroxidase ........................................ Page 74 Discussion ............................................................ Page 77 Literature cited . ..................................................... Page 82 Chapter 4: Summary and Conclusions ..................................... Page 85 Appendix A: A Theoretical Study of the Association of Arbuscular Mycorrhizal Colonization with Border Cell Production. Abstract . ............................................................ Page 88 Introduction .......................................................... Page 88 Materials and Methods . .............................................. Page 90 Reference list collection ............................................ Page 90 Statistical analysis ................................................. Page 91 Results .............................................................. Page 91 AM colonization, BC production ................................... Page 91 Cluster analysis .................................................... Page 91 Discussion ............................................................ Page 91 Literature cited . .................................................... Page 101 viii LIST OF TABLES Table 1.1. Yield and AM colonization at the high-input farm .............. Page 18 Table 1.2. AM spore populations at the high-input farm ................... Page 23 Table 1.3. Yield and AM colonization at the low-input farm ............... Page 25 Table 1.4. AM spore populations at the low-input farm ................... Page 28 Table 2.1. Table 1. Application rate and timing of fungicides used in a greenhouse study of potato minituber production (Exp’t. 1) ........................... Page 45 Table 2.2. Prenuclear minituber yield of potato grown in the greenhouse with and without AM (Exp’t. 1) . .............................................. Page 49 Table 2.3. Phosphorus concentration of stem + leaf tissue and AM colonization level of potato roots grown in the greenhouse (Exp’t. 1) . . ................... Page 51 Table 2.4. Stolon and tuber initiate development of potato grown in the greenhouse with and without AM (Exp’t.2) ....................................... Page 54 Table 2.5. Phosphorus concentration of stem plus leaf tissue and colonization level of potato roots grown in the greenhouse with and without AM (Exp’t. 2) Page 56 Table 3.1. Progression of fusarium dry rot in potato minitubers grown in nonmycorrhizal (CTRL) and mycorrhizal (INOC) growing media ........ Page 75 Table A. 1. AM colonization and BC production .......................... Page 92 LIST OF FIGURES Figure 1.1. Population of AM spores in field soil samples taken from three different rotations within two input systems. Individual points are the mean of four samples, bars indicate standard error. ........................................... Page 21 Figure 2.1. Total length of stolon material (cm) produced per potato plant, by ranges of production, (Exp’t.2, Apr.-July 1994, at Johannesburg, MI). Each of the six samples per treatment represents the average of three plants. The data from each of the six inoculated (INOC) and the six control (CTRL) beds are expressed as total stolon production per plant (cm). Weeks post planting .................. Page 45 Figure A.1. Cluster analysis of the major families represented in the data set (Fabaceae, Poaceae, Amaranthaceae, Solanaceae, Brassicaceae, Chenopodiaceae). Shapes indicate family, patterns indicate cluster ......................... Page 96 INTRODUCTION Mycorrhizae Mycorrhizal fungi are ubiquitous soil fungi that form associations with the roots of most plant species on Earth; these associations are generally symbiotic and beneficial to the health and growth of the plant (Pfleger and Linderman, 1994). There are five major categories of mycorrhizal associations, each having distinct morphology anatomy and host range: arbuscular mycorrhizae, ectomycorrhizae, ecetendomycorrhizae, ericaceous mycorrhizae and orchidaceous mycorrhizae (Harley and Smith, 1983). Of these, arbuscular mycorrhizae (AM), previously known as vesicular-arbuscular mycorrhizae (V AM), are the most predominant (Harley and Smith, 1983). These fungi form associations in most of the world’s biomes with most of the world’s plant species; these species include most of the major agricultural and horticultural plants, including com (Zea mays) , wheat (Triticum aestivum), oat (Avena sativa), cucumber (Cucumis sativus), clover (Trifolium repens), soybean (Glycine max), bean (Phaseolus vulgaris), coffee (Cofiea arabica) and citrus (Citrus spp.) (Safir, 1994). Given the cosmopolitan nature of AM fungi, plants that do not form these associations are considered the exception (Gerdemann, 1968; Tester et al. , 1987). Within Zygomycetes, the order Glomales contains two sub-orders, Glomineae and Gigasporineae. There are five genera of AM fungi, containing approximately 150 species: Glomus, Acaulospora, 2 Entrophospora (all within Glomineae), Gigaspora and Scutellospora (both within Gigasporineae) (Morton et a1. , 1995). Germination AM fungal spores can germinate and initiate hyphal growth in the soil independently. The infective hyphae grow through the soil, and attach to the surface of nearby plant roots. The hyphae form appresoria, penetrate the root, and initiate the association. If there are no plant roots in the vicinity, hyphal growth ceases and the fungus re-enters a dormant state (Bowen, 1987). Continued hyphal growth through the soil and sporulation can only occur in the presence of host plant roots, although actual physical contact between hyphae and root is not required (Becard and Piche, 1989). Plant exudates stimulate hyphal growth, branching and differentiation, and also stimulate host penetration and arbuscule development (Becard and Piche, 1989). AM spores will germinate axenically in vitro, but hyphal growth ceases after a short time upon depletion of spore carbon reserves. Growth of the hyphae in the presence of the root may be separated into two phases: an initial slow hyphal growth phase, relying on the AM spore carbon reserves, and a more rapid hyphal growth phase , relying on carbon obtained from the plant root via arbuscules. The initial growth phase may be independent, stimulated by signals from the root; the second phase is entirely root dependent (Becard and Piche, 1989). Colonization AM fungal hyphae form appresoria, penetrate the root and spread through the outer layers of root tissue. The fungal hyphae invades both inter- and intracellularly through the periderm; the meristems and central root cylinder are not colonized 3 (Bonfante-Fasolo, 1984; Jacquelinet-Jeanmougin et a1. 1988). In the deeper layers of the root cortex, intercellular and intracellular hyphae branch to form vesicles, which are used for storage of fungal lipids (Cooper, 1984). Intercellular hyphae also differentiate into arbuscules, transitory structures with large surface area, which are the site of the majority of nutrient exchange between the fungus and the plant (Jakobsen, 1995). Individual arbuscules have a functional life span of 4-10 days, after which they are degraded by the plant; the host cell returns to normal. The remainder of the mycelium is unaffected by this degradation and continues to grow and form other arbuscules. Host responses AM fungi enhance nutrient uptake and translocation to the host plant, while the host provides high-energy carbon compounds to the fungus (Hampp and Schaeffer, 1995). In nutrient limiting soils, mycorrhizal plants have higher rates of growth than non-mycorrhizal plants. Growth responses may have a lag time of weeks after the start of colonization; this may be a result of competition for photosynthate between the fungus and the host sinks (Smith and Gianinazzi-Pearson, 1988). AM fungi enhance the assimilation of a number of mineral nutrients, including zinc (Zn), sulfur (S), calcium (Ca) and, most significantly, phosphorus (P). Nutrient uptake is the major contribution of the fungus to the symbiosis. The fungal hyphae are able to exploit the soil profile more extensively than roots and root hairs, extending significantly beyond the zone of depletion without mycorrhizae (Hayman, 1983). AM fungal hyphae are able to penetrate soil microaggregates that roots are unable to penetrate (Miller and Jastrow, 1992). Mycorrhizal uptake and importation of soil nutrients depends on development of extramatn'cal hyphae in soil, hyphal absorption of the 4 relatively immobile phosphates, translocation of P through the hyphae and transfer of P from the fungus to the plant (Rhodes and Gerdemann, 1975). Initial soil P availability will determine the extent to which AM fungi will form a functioning association with the plant roots. Under high P availability, the advantage gained from luxury P contributions from the fungus to the plant tend not to offset the metabolic cost of maintaining the association, and the extent of mycorrhizal infection is therefore reduced (Hepper, 1983). In addition to enhanced nutrition, mycorrhizal plants can have increased resistance to diseases, including phytonematodes (Rosendahl and Rosendahl, 1990) and pathogenic fungi (Newsham et al., 1993), increased drought tolerance (Nelsen and Safir, 1982), tolerance of salt stress (Sylvia and Williams, 1992) and heavy metal toxicity (Sylvia and Williams, 1992). Sustainable agriculture Unintended ancillary effects of high-input agriculture are only now coming to light (Harwood, 1990). Long—term use of pesticides has resulted in resistant insect, fungal and bacterial pathogens, requiring the production of new and more toxic agrochemicals (W intersteen and Higley, 1993). Pesticide runoff from agricultural soils has been shown to contaminate groundwater. while excess fertilizer runoff contributes to algal blooms in surface water, harming fish populations and disrupting aquatic ecosystems (Logan, 1990; Wintersteen and Higley, 1993). Extensive plowing and intensive monocropping can increase the rate of degradation of topsoil through loss of mineral nutrients and depletion of soil organic matter (Okigogo, 1990; Cuperus et al., 1993). This loss of organic matter decreases the soil’s ability to retain water and mineral nutrients, as well as its ability to resist erosion by wind and water (Sposito, 1989). Techniques developed in 5 organic and low—input production systems can be adapted to reduce the impact of the more damaging aspects of conventional high-input agriculture (Brady, 1990; Bethlenfalvay, 1992). Crop rotations that include nitrogen fixing legumes can increase crop productivity and soil quality directly by incorporation of nitrogen-rich organic residues, and indirectly by influencing other components of the agroecosystem (Johnson and Pfleger, 1992; Francis and Clegg, 1990). Rotations have historically been essential to profitable crop production (Harwood, 1990), but the introduction of relatively inexpensive nitrogen fertilizer after World War II encouraged farmers to focus on continuous cash cropping, and to rely more heavily on chemical inputs for fertility (Francis and Clegg, 1990; Bethlenfalvay, 1992). Incorporation of detritus into the soil contributes to soil organic matter content, which aides in maintaining good soil structure, nutrient exchange capacity and water holding capacity (Miller and Iarson, 1990; Sposito, 1989). Crops in a well designed rotation sequence can reduce populations of plant pathogenic insects, nematodes, fungi and bacteria (Francis and Clegg, 1990; Hendrix et al., 1990). As pathogens often associate themselves with particular plant hosts, switching between plants that differ greatly (long-season vs. short-season, perennial vs. annuals, etc.) can interrupt the pests’ reproductive cycles. This principle is one of the cornerstones of the modern concept of integrated pest management (Brown, 1993). More complex plant communities tend to foster more diverse soil microbial populations that serve to reduce the likelihood of explosive growth of any one species (Linderman, 1992). The most common form of multiple cropping, crop rotations, involve the sequential planting and growth of different plants on a given site. Planting systems that 6 incorporate different plants simultaneously in a given location is more correctly called intercropping (Stinner and Blair, 1990). In intercropped systems, the lack of an intervening time between crops as in a crop rotation results in a greater degree of synergy between the plants. This synergy serves to promote the health and productivity of the crop plants in the absence of conventional chemical inputs (Francis and Clegg, 1990; Stinner and Blair, 1990). Concurrently grown non-crop plants may exert direct influences on the crop plant, such as increasing nitrogen availability (Lal, 1987; Brown and Thomas, 1990). The influences may also be more indirect, such as the suppression of pathogens (Brust et al., 1986) and/ or stimulation of predators (Stinner and Blair, 1990) Under appropriate conditions, intercropping can be an effective system, with multiple food producing plants growing together. A useful example is a polyculture of corn, beans and squash, a type of intercropping practiced in Central America since prehispanic times (Pinchinat et a1. , 1976). Given sufficient water, the synergy between the three plants stimulates corn productivity over that of monoculture yields, and allows the production of a larger total amount of food per unit area than could be expected from a monocropping system of any of the three plants alone (Gliessman, 1990). The corn stalk provides support for the beans, the beans fix nitrogen into the soil, and the wide, low leaves of the squash shade out weed competitors (Gliessman, 1983; Gliessman 1990). As legumes are known to create a variety of compounds that stimulate AM fungi (Nair et al., 1991; Siqueira et al., 1991; Safir, 1994), it may be that AM associations increase in the intercropped system. AM fungi are known to connect the roots of adjacent plants, facilitating nutrient transfer (Francis and Read, 1984). In tropical and subtropical climates, the three plants are seeded simultaneously; in temperate climates, this results 7 in the beans overwhelming the corn, and the synergy instead becomes competition. This can be addressed by allowing the corn to germinate and develop a stalk before the other seeds are planted. The modifications and adaptations necessary to make this particular production system effective are strongly emblematic of one of the central premises of sustainable agriculture, that care must be taken to design a production system that is appropriate for the particular climate, edaphic and biological influences at the particular growing site. 8 Literature cited Bethlenfalvay, GJ. 1992. Mycorrhizae and crop productivity. pp. 1-28 In G]. Bethlenfalvay and R.G. Linderman. (eds.) Mycorrhizae in sustainable agriculture, American Society of Agronomy, Inc. Madison, WI Becard, G. and Y. Piche. 1989 New aspects on the acquisition of biotrophic status by a vesicular-arbuscular mycorrhizal fungus, Gigaspora margarita. New Phytologist 112:77-83 Bonfante-Fasolo, P. 1984. Anatomy and morphology. pp. 5-34 In C.L. Powell and DJ. Bagyaraj (eds.) VA Mycorrhiza. CRC Press, Boca Raton, FL Bowen, GD. 1987. The biology and physiology of infection and its development. pp. 27—58 In G.R. Safir (ed.) Bcophysiology of VA mycorrhizal plants. CRC Press, Boca Raton, FL Brown, H.C.P. and V.G. Thomas. 1990. Ecological considerations for the future of food security in Africa. pp. 353-377 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller, and G. House (eds.) Sustainable agricultural systems. Soil and Water Conservation Soc. , Ankeny, IA Brown, W.M. , Jr. 1993. The role of IPM in contemporary agriculture and environmental issues. pp. 171-180 In A.R. Leslie and G.W. Cuperus (eds.) Successful implementation of integrated pest management for agricultural crops. Brust, G.E., B.R. Stinner and DA. McCartney. 1986. Predation by soil inhabiting arthropods in intercropped and monoculture agroecosystems. Agriculture, ecosystems and environment 18:145-154 Cooper, K.M. 1984. Physiology of VA mycorrhizal associations. pp. 155-186 In C.L. Powell and DJ. Bagyaraj (eds.) VA Mycorrhiza. CRC Press, Boca Raton, FL Cuperus, G.W. , G.V. Johnson and WP. Morrison. 1993 Integrated wheat management. pp.33-56 In A.R. Leslie and G.W. Cuperus (eds.) Successful implementation of integrated pest management for agricultural crops. Francis, RA. and DJ. Read. 1984. Direct transfer of carbon between plants connected by vesicular-arbuscular mycorrhizal mycelium. Nature 307:53-56 Francis, CA. and Clegg, MD. 1990. Crop rotations in sustainable agriculture. pp. 107- 122 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller, and G. House (eds.) Sustainable agricultural systems. Soil and Water Conservation Soc. , Ankeny, IA Gerdemann, J .W. 1968. Vesicular-arbuscular mycorrhiza and plant growth. Annu. Rev. Phytopathol. 6:397-418 9 Gliessman, SR. 1983 Allelopathic interactions in crop-weed mixtures: applications for weed management. J. Chemical Ecology 9:991-999 Gliessman, SR. 1990. Understanding the basis for sustainability in the tropics: experiences in Latin America. pp.37 8-390 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller, and G. House (eds.) Sustainable agricultural systems. Soil and Water Conservation Soc. , Ankeny, IA Hampp, R. and C. Schaeffer. 1995. Mycorrhiza - carbohydrate and energy metabolism. pp. 267-296 In A. Varma and B. Hock (eds.) Mycorrhiza: structure, function molecular biology and biotechnology. Springer-Verlag, New York, NY Hayman, BS. 1983. The physiology of vesicular-arbuscular endomycorrhizal symbiosis. Can. J. Bot. 61:944-963 Harley, IL. and Smith, SE. 1983. pp.1-11 Mycorrhizal symbiosis. Acad. Press, New York Harwood, RA. 1990. A history of sustainable agriculture. pp. 3-19 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller and G. House (eds.) Sustainable agriculture systems. Soil and Water Conservation Soc., Ankeny, IA Hendrix, P.F., D.A. Crossley, Jr., J.M. Blair and DC. Coleman. 1990. Soil biota as components of sustainable agroecosystems. pp.637-654 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller and G. House (eds.) Sustainable agriculture systems. Soil and Water Conservation Soc. , Ankeny, IA Hepper, CM. 1983 The effect of nitrate and phosphate on the vesicular-arbuscular mycorrhizal infection of lettuce. New Phytologist 92:389-399 Jacquelinet-Jeanmougin, S., V. Gianinazzi-Pearson and S. Gianinazzi. 1988. Endomycorrhizas in the Gentianaceae. II. Ultrastructural aspects of symbiont relationships in Gentiana lutea L. Symbiosis 3:269—286 J akobsen, I. 1995. Transport of phosphorus and carbon in VA mycorrhizas. pp. 297-324 In A. Varma and B. Hock (eds.) Mycorrhiza: structure, function molecular biology and biotechnology. Springer—Verlag, New York, NY Lal, R. 1987. Managing the soils of sub-Saharan Africa. Science 236:1069-1076 Linderman, R.G. 1992. Vesicular-arbuscular mycorrhizae and soil microbial interactions, pp. 45-70 In 6.]. Bethlenfalvay and R.G. Linderman (eds.). Mycorrhizae in sustainable agriculture. Amer. Soc. Agron. , Madison, WI. 10 Logan, TJ. 1990. Sustainable agriculture and water quality. pp. 582-613 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller and G. House (eds.) Sustainable agriculture systems. Soil and Water Conservation Soc., Ankeny, IA Miller, RP. and WE. Larson. 1990. Lower input effects on soil productivity and nutrient cycling. pp. 549-568 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller and G. House (eds.) Sustainable agriculture systems. Soil and Water Conservation Soc. , Ankeny, IA Miller, RM. and J .D. Jastrow. 1992. The role of mycorrhizal fungi in soil conservation. pp. 29-44 In G]. Bethlenfalvay and R.G. Linderman. (eds.) Mycorrhizae in sustainable agriculture, American Society of Agronomy, Inc. Madison, WI Morton, J .B., M. Franke and SP. Bentivenga. 1995 Developmental foundations for morphological diversity among endomycorrhizal fungi in Glomales (Zygomycetes). pp. 669-683 In A. Varma and B. Hock (eds.) Mycorrhiza: structure, function molecular biology and biotechnology. Springer-Verlag, New York, NY Nair, M.G. , G.R. Safir and J .O. Siqueira. 1991. Isolation and identification of vesicular- arbuscular mycorrhiza-stimulatory compounds from clover (Trifolium repens) roots. Applied and environmental microbiology 57(2):434-439 Nelsen, CE. and GR. Safir. 1982. Increased drought tolerance of mycorrhizal onion plants caused by improved phosphorus nutrition. Planta 154:407-413. Newsham, K.K., Fitter, A.H. and Watkinson, AR. 1993 Arbuscular mycorrhiza protect an annual grass from root pathogenic fungi in the field. J Ecology 83:991-1000. Okigbo, B.N. 1990. Sustainable agricultural systems in tropical Africa. pp. 323-352 In C.A. Edwards, R. Lal, P. Madden, R.H. Miller and G. House (eds.) Sustainable agriculture systems. Soil and Water Conservation Soc. , Ankeny, IA Pfleger, EL. and R.G. Linderman. 1994. Preface, Mycorrhizae and plant health. APS Press, St. Paul, MN Pinchinat, A.M., J. Soria and R. Bazan. 1976. Multiple cropping in tropical America. pp.51-64 In R.I. Papendick, P.A. Sanchez and GB. Triplett (eds.) Multiple cropping. Special publication 27. American Society of Agronomy, Madison, WI Rhodes, L.H. and J .W. Gerdemann. 1975 Phosphate uptake zones of mycorrhizal and non-mycorrhizal onions. New Phytologist 75:555-561 Rosendahl, ON and S. Rosendahl. 1990. The role of vesicular-arbuscular mycorrhiza in controlling damping-off and growth reduction in cucumber caused by Pythium ultimum. Symbiosis 9:363-366 11 Safir, GR. 1994. Involvement of cropping systems, plant produced compounds and inoculum production in the functioning of VAM fungi. pp. 239-260 In F .L. Pfleger and R.G. Linderman (eds.) Mycorrhizae and plant health. APS Press, St. Paul, MN Siqueira, J .O., G.R. Safir and MG. Nair. 1991. Stimulation of vesicular-arbuscular mycorrhiza formation and growth of white clover by flavonoid compounds. New Phytol. 118287-93 Smith, SE. and V. Gianinazzi Pearson. 1988. Physiological interactions between symbionts in vesicular-arbuscular mycorrhizal plants. Ann. Rev. Plant Phys. and Plant Mol. Biol. 39:221-244 Stinner, BR. and J .M. Blair. 1990. Ecological and agronomic characteristics of innovative cropping systems. pp. 123-140 in CA. Edwards, R. Lal, P. Madden, R.H. Miller, and G. House. Sustainable agricultural systems. Soil and Water Conservation Soc., Ankeny, IA Sposito, G. 1989. Soil organic matter. pp. 42-66 In The chemistry of soils. Oxford University Press, New York, NY. Sylvia, D.M. and SE. Williams. 1992. Vesicular-arbuscular mycorrhiza and environmental stress. pp. 101-124 In G]. Bethlenfalvay and R.G. Linderman. (eds.) Mycorrhizae in sustainable agriculture, American Society of Agronomy, Inc. Madison, WI Tester, M., Smith, SE, and Smith, FA. 1987. The phenomenon of "nonmycorrhizal" plants. Can. J. Bot. 65:419-431 Wintersteen, W.K. and LG. Higley. 1993. Advancing IPM systems in corn and soybeans. pp. 9-32 In A.R. Leslie and G.W. Cuperus. Successful implementation of integrated pest management for agricultural crops. Chapter 1. Arbuscular mycorrhizal fungus spore populations and colonization of potato: crop rotation and input level as major factors Abstract Arbuscular mycorrhizal (AM) fungal colonization of a crop can be influenced by crop rotation sequence and by the overall management regimen. This study was conducted to examine potato yield, colonization of potato (AM) fungi, and AM spore populations under different rotations within different management regimens. Two types of management schemes were used: a high-input (high fertility and irrigation) potato- alfalfa rotation in which potato crops were interrupted by varying years of alfalfa, and a low-input (low fertility and zero irrigation) system that employed several types of intervening crops in rotations with varying yield potential (Low, Medium and High). Field soil AM spore populations, AM root colonization at harvest, and total yield (by size class) were measured. The reproductive capacity of AM spore populations was assessed with sorghum trap cultures. For the high-input rotation system, potato following potato (PP) was clearly inferior to potato following one (AP) or two (AAP) years of alfalfa, in terms of total yield, size distribution and AM colonization. There were no significant total yield or proportional differences between AP and AAP, although AM colonization tended to be higher in AP. For the low-input system, there were no significant differences in total yield and AM colonization between rotations. During the growing season, differences in AM spore populations between rotations were more pronounced in the high-input system, although overall spore numbers tended to be higher in field soil from the low-input system. Trap culturing and identification of AM spores 12 13 showed that Glomus was the predominant genus in soil samples from both systems. In the high-input system, total spore numbers followed the pattern APP < AAP < PAP; proportional distributions within and between genera showed little difference between rotations. The AM population in the low-input system showed greater differences between rotations in spore numbers and in the proportional distributions within and between genera. These results suggest that lower input management systems result in more diverse mycorrhizal communities that are better able to adapt to perturbations caused by changes in the rotation. Introduction Arbuscular mycorrhizae (AM) are ubiquitous soil fungi that form symbiotic associations with the root systems of many crop plants (Bagyaraj, 1984). These associations can increase growth and crop yield of many plants, in many cases by enhancing nutrient uptake (particularly phosphorus), and improving tolerance to disease, pathogens and water stress (Nelsen and Safir, 1982; Powell, 1984; Linderman, 1992). High-input management techniques, i.e. incorporate extensive use of chemical inputs, irrigation and extensive tillage, have been shown to reduce AM spore populations and colonization of crop plants, while low-input management regimens, i.e. reduced chemical inputs and organic cultivation, increased the abundance of AM fungi (Douds et a1. , 1993; McGonigle and Miller, 1993; Kurle and Pfleger, 1994). Crop rotations have long been known to influence crop yield, water availability and disease progression (Francis and Clegg, 1990; Luna and House, 1990). Crop rotations, usually incorporating at least one legume component, are especially important 14 in potato production, and are standard practice in most potato-growing regions of the US. (Rowe, 1983). The legume crop fixes atmospheric nitrogen into organic matter. This is incorporated into the soil: shoot and root material in the case of green manure or mop crops seeded post-harvest, or root material alone in the case of hayfield or pasture production. The increased soil organic matter provides numerous well understood benefits, including increased water retention, improved soil aggregation and soil structure, resistance to erosion, season-specific increase in available nitrogen and phosphorus (due to increased microbial degradation and nutrient release with rising soil temperatures in spring), increased populations of soil macrofauna (e. g. earthworms, micro- and macroarthropods) (Francis and Clegg, 1990; Luna and House, 1990). Different rotation schemes can have distinctly different effects on soil quality and soil microbiota, including AM fungi (Francis and Clegg, 1990; Johnson et al., 1991). Different kinds of rotations, as a component of the larger management philosophy, can influence AM spore populations, and mycorrhizal colonization of the crop plants (Johnson et a1. , 1992; Kurle and Pfleger, 1996). AM populations in the soil can be manipulated directly by inoculation with specific AM cultures, or indirectly by altering the rotation design and structure. AM cannot yet be cultured axenically, which suggests that the increased input costs associated with AM inoculum would limit it’s applicability to relatively high-value cr0ps (Niemira et a1. 1995). Indirect manipulation via cropping or management practices may therefore be the most practical approach to manipulation of AM populations in the field (Hendrix et al. , 1990; Thompson, 1994; Kurle and Pfleger, 1996). 15 This study was conducted in collaboration with Mike Birney (Dept. of Entomology, Michigan State University) to determine the impact of different rotations (simple and complex) within different management schemes (high-input, low-input) on potato yield, mycorrhizal colonization of potato roots, AM spore populations in field soils, and the relative reproductive capacities of the AM fungal populations. Materials and Methods High-input system Kitchen Potato Farm, Alba, MI, is a high-input center pivot irrigated farm on sandy loam soil. This farm uses a conventional management philosophy, including high levels of irrigation and fertility, with fertilizer applications to the field at planting and at 3 weeks post-planting. Potatoes were grown in simple multi-year rotations, with intervening alfalfa used as green manure. Pesticides, including the biocide Vapam (metham sodium), were used as needed during the course of the season. At the Kitchen Potato Farm, three rotation types were used: alfalfa-alfalfa—potato (AAP, two year gap), potato-alfalfa-potato (PAP, one year gap), and alfalfa-potato-potato (APP, zero year gap). Plots consisted of multiple rows 6.2m (20’) long. Potato root samples used for AM colonization were collected 7-10 days prior to harvest. Soil samples were collected for AM spore analysis during the course of the season. Harvest of the experimental plots was done by hand. Potatoes were sorted by size and weighed. This study was repeated in an additional year. 16 Low-input system Butler Potato Farm, Crystal Falls, MI, is a low-input farm using a dry land potato production system on sandy loam soil. The farm uses organic procedures and extensive IPM monitoring; pesticides and fungicides are used sparingly. Potato production on this farm involved a variety of complex multi-year rotation types, based on a range of yield expectancies: red clover-annual rye-red clover-annual rye-potato rotation (a four year gap, the highest yield expectation), red clover-red clover/winter rye-potato rotation (a medium yield expectation), red clover-red clover-potato rotation (the least complex, with the lowest yield expectation). Plots consisted of multiple rows 6.2m (20’) long. Potato root samples used for AM colonization were collected 7-10 days prior to harvest. Soil samples were collected for AM spore analysis during the course of the season. Harvest of the experimental plots was done by hand. Potatoes were sorted by size and weighed. This study was repeated in an additional year. AM root colonization assay The collected roots were cleared and stained with Trypan blue according to Phillips and Hayman (1970). Root colonization by AM fungi was determined by the line-intersect method (Kormanik and McGraw, 1982). AM spore isolation and census Soil samples were collected to survey the population of AM spores. Soil samples at one week, four weeks and 16 weeks post planting during the 1992 growing season were assessed directly for number of AM spores per gram using sucrose centrifugation (Neslen and Safir, 1982; Daniels and Skipper, 1982). The early season samples can yield information about the inoculum potential of the soil primarily due to the previous l7 season’s AM spores, while the later season samples yield information primarily about the AM spores produced during the season. Soil samples from the 1993 season were collected at harvest. The structure and reproductive capacity of the AM spore populations was determined according to Morton et al. (1993), with the following modifications. Soil samples were stored at 4°C for approx. 8 months, then used to inoculate sorghum trap cultures. These trap cultures were grown for 24 weeks, and allowed to rest for approx. 12 months. AM spores were isolated from the soil/ sand matrix (Daniels and Skipper, 1982), and sorted by genus using phenotypic characters (Morton, 1988). Trap culturing provides information about the relative reproductive capacity of the AM spore populations that cannot be obtained from isolation from field soils directly. Trap cultures also yield AM spores that can be more easily separated taxonomically. Statistical analysis Data were analyzed with multivariate one-way ANOVA (analysis of variance) using the statistical package Minitab. Results High-input system The zero year rotation clearly resulted in the poorest yields and lowest AM colonization (Table 1.1). In general, 1993 was a better production year than was 1992. In 1992 and 1993, the APP rotation resulted in a consistently higher percentage of overall crop in the form of small tubers. The AAP rotation tended to have a slightly higher overall yield than the PAP rotation, but this was not a statistically significant difference. 18 Table 1.1. High-input system field results, 1992-93 a Data from 1992 are mean of four samples, data from 1993 are mean of nine samples. Within years, data followed by different letters are significantly different (P s 0.05). b "Year Diff." indicates difference between growing seasons. Treatments marked with a "*" are significantly different (P5005). c APP = alfalfa-potato-potato; PAP = potato-alfalfa-potato; AAP = alfalfa-alfalfa-potato Factor Rotation 1992a 19933 Pb Small (Kg/row) APPc 3.3a 2.0a * PAP 2.0b 3.5b * AAP 1.2b 4.0b * Large (Kg/row) APP 6.5a 2.0a nd PAP 22.7b 26.0b nd AAP 24.1b 28.5b nd Total (Kg/row) APP 9.8a 4.0a * PAP 24.8b 29.5b nd AAP 25.4b 32.5b * % Small APP 34.1a 57.0a * PAP 8.3b 12.2b nd AAP 4.9b 12.4b nd AM colonization % APP 3.2a 5.9a nd PAP 11.0b 17.3b * AAP 4.8b 11.2c * 20 In the 1993 season, the PAP rotation had significantly higher AM colonization than the AAP rotation; in 1992, this difference was not statistically significant at P 50.05. AM spore populations in soil samples taken during the growing season from the high-input farm showed significant (P S 0.05) differences between rotations early in the season (Figure 1.1B), with APP having more spores per gram of soil than either PAP or AAP, which were not different from each other. There were no significant differences later in the season. Spore population distributions after trap culturing soil samples from the high-input system showed significant (P $0.05) differences in total spore population between rotations (Table 1.2). These differences were due to significant differences in the population of spores from the predominant genus, Glomus, and were specifically due to differences in the populations of a single one of the three phenotypic sub-groups within Glomus that were present in the trap cultures. There were no significant differences between rotations in the number of spores from the other AM genera in the population, Gigaspora and Acaulospora, each of which were represented by two phenotypic sub- groups. The proportional representations of the three genera were not different between rotations. The predominant phenotypic sub-group within Glomus had a lower proportional representation in the APP rotation than in either PAP or AAP. Low-input system Changes in the rotations had little significant effect on absolute yield, proportional yield or AM colonization (Table 1.3). For these plots, 1992 was a better production year than 1993. In 1992, the rotation with the highest yield expectation tended to have higher production than other rotations, but these differences were not statistically significant. 21 Figure 1.1. Population of arbuscular mycorrhizal (AM) fungal spores in field soil samples taken from three different rotations within two input systems. Individual points are the mean of four samples, bars indicate standard error. AM spores/g soil AM spores/g soil 22 Butler (Low-input), 1992 0 Low El Medium A ngh Kitchen (High-input), 1992 O APP [I] PAP A AAP “’1 I I I I f I 6 8 1O 12 14 16 Weeks post planting 18 23 Table 1.2. AM spore population distribution in trap cultures inoculated with soil from the high-input system. a APP = alfalfa-potato-potato; PAP = potato-alfalfa—potato; AAP = alfalfa-alfalfa-potato b number of spores per 20 g sample, mean of four samples c numbers in a given row with different letters are significantly different (P s 0.05) (1 number of spores per 20 g sample as % of total spores, mean of four samples 24 APP“ PAP AAP All generab 118.5ac 269.3b 203.8c Total Glomus 104.3a 247.5b 170.3c brown, clear 84.5a 222.0b 170.3c white, opaque 12.5a 13.0a 11.5a white, clear 7.3a 12.5a 5.8a Total Gigaspora 8.5a 7.5a 7.5a white, opaque 2.0a 2.0a 4.0a brown, clear 6.5a 5.5a 3.5a Total Acaulospora 5.8a 14.3a 8.8a brown, clear 2.5a 8.0a 5.8a white, clear 3.3a 6.3a 3.0a All generad 100.0a 100.0a 100.0a Total Glomus 87.4a 91.3a 91.3a brown, clear 70.1a 81.4b 82.3b white, opaque 11.0a 5.1a 6.0a white, clear 6.3a 4.8a 3.0a Total Gigaspora 7.5a 3.0a 4.0a white, opaque 1.8a 0.8a 2.2a brown, clear 5.7a 2.2a 1.8a Total Acaulospora 5.0a 5.7a 4.7a brown, clear 2.2a 3.1a 3.1a white, clear 2.8a 2.6a 1.6a 25 Table 1.3. Low-input system field results, 1992-93 a Data from 1992 are mean of 4 samples, data from 1993 are mean of 12 samples. Within years, data followed by different letters are significantly different (P5005). b " Year Diff." indicates difference between growing seasons. Treatments marked with a "*" are significantly different (P3005). 26 Factor Yield 1992a 19938 Pb potential Small (Kg/row) Low 2.7a 2.9a ND Medium 3.5a 3.2a ND High 2.8a 3.7a ND Large (Kg/row) Low 21.8a 16.5a * Medium 23.0a 16.7a * High 26.0a 13.8b * Total (Kg/row) Low 24.5a 19.5a * Medium 26.4a 19.9a * High 28.9a 17.5a * % Small Low 11.1a 15.6a ND Medium 13.1a 16.3a ND High 9.5a 21.0b * AM colonization % Low 12.0a 4.4a * Medium 13.2a 4.5a * High 12.7a 5.2a * 27 In 1993, the rotation with the highest expectation yielded fewer large tubers, and a higher percentage of small tubers. There were no differences between rotations in overall yield in either year. Mycorrhizal colonization for each year was not statistically different between rotations, but AM colonization was clearly higher for all rotations in 1992 than in 1993. There were no significant differences in spore number in field soil samples taken during the growing season from the different rotations used at the low-input farm at any of the sampling dates (Figure 1.1A). Spore population distributions after trap culturing soil samples from the low-input system showed significant (P 50.05) differences in total spore population between rotations (Table 1.4). These differences were due to significant differences in the population of spores from the predominant genus, Glomus. Unlike the trap cultures of the soils from the high-input system, there was no single dominant sub-group. The differences were due to differences in the populations of three of the four phenotypic sub- groups within Glomus that were present in the trap cultures, including one sub-group which was not present in trap cultures of soils from the high-input system. The genera Gigaspora and Acaulospora were each represented by two phenotypic sub-groups. Gigaspora was not represented at all in trap cultures of soils from the high expectation rotation, while Acaulospora was not represented at all in trap cultures of soils from the medium expectation rotation. The proportional representations of Glomus and Gigaspora were significantly (P s 0.05) different between rotations. The proportional representations of three of the four phenotypic sub-groups within Glomus were different between rotations. 28 Table 1.4. AM spore population distribution in trap cultures inoculated with soil from the low-input system. a APP = alfalfa-potato-potato; PAP = potato-alfalfa-potato; AAP = alfalfa-alfalfa-potato b number of spores per 20 g sample, mean of four samples c numbers in a given row with different letters are significantly different (P s 0.05) d number of spores per 20 g sample as % of total spores, mean of four samples 29 Lowa Medium High All generab 468.0a° 114.3b 194% Total Glomus 465.8a 107.0b 193.8c brown, clear 125.8ab 70.3a 188.8b white, opaque 52.5a 10.3b 1.5b white, clear 286.3a 21.5b 1.8c red, opaque 1.3a 5.0a 1.8a Total Gigaspora 0.8a 7.3a 0.0a white, opaque 0.0a 4.5a 0.0a brown, clear 0.8a 2.8a 0.0a Total Acaulospora 1.5a 0.0a 0.3a brown, clear 0.8a 0.0a 0.3a white, clear 0.8a 0.0a 0.0a All genera‘l 100.0a 100.0a 100.0a Total Glomus 99.5ab 94.1a 99.9b brown, clear 28.2a 62.2b 95.8c white, opaque 11.4a 9.6a 1.3b white, clear 59.7a 18.1b 1.4c red, opaque 0.3a 4.2a 1.4a Total Gigaspora 0.2a 5.9b 0.0a white, opaque 0.0a 3.7a 0.0a brown, clear 0.2a 2.1a 0.0a Total Acaulospora 0.3a 0.0a 0. la brown, clear 013 0.0a 0.1a white, clear 013 0.0a 0.0a 30 Discussion Our study suggests that the extent to which specific rotations can influence potato yield, AM spore density, AM spore population reproductive capacity and AM colonization of potato is determined by the overall management scheme. Across rotations, degree of AM colonization is associated with yield in both the high-input and the low-input systems. Significant differences in spore reproductive capacity in trap culture from the high-input system are associated with differences in AM colonization in the field, whereas the even more dramatic differences in spore reproductive capacity and diversity from the low-input system did not significantly alter the AM colonization of potatoes in the field. This suggests that the more diverse AM fungal populations from the low—input system are more responsive to changes in rotation than that from the high- input system. On the high-input farm, the APP rotation is inferior to either the PAP or AAP rotation, with regard to AM colonization and yield. The pattern of AM colonization follows the pattern of spore reproductive capacity shown in trap culture, APP < AAP < PAP. Potato yields differed from this pattern in that yields were not significantly different between PAP and AAP rotations, both of which were higher than the APP rotation. Spore numbers in the field in the early part of the season were higher in the APP field than in the PAP or AAP field. This does not correlate with the levels of AM colonization in potato roots taken at the end of the season, with colonization in the APP field lower than in the PAP or AAP fields. On the low-input farm, there were no differences in AM colonization or yield between the rotations. There were no significant differences in total yields for 1992 or 31 1993, although in 1993, the rotation with the highest yield expectation had significantly fewer large tubers, and a higher proportion of small tubers than other rotations. The marked difference in tendencies between the years suggests that, for the low-input system, the differences in yield caused by the different rotations are less critical than climatological factors. The different rotations on the low-input farm show no differences in AM spore densities in field soils at any point during the growing season. Trap culturing of these soils shows greater variation in the reproductive capacity of the AM spore populations from the low-input system vs. the high-input system. This suggests a legacy "bank" of AM spores in the low-input system that is more extensive and more responsive than that of the high-input system. The complexity of the low-input farm’s agroecology may provide a greater flexibility in response to changes in rotation (Stinner and Blair, 1990), although the relationship between a system’s complexity and its stability is not well defined (Crawley, 1986). The AM spore population distribution in the trap cultures of the soils from the high-input system showed little significant difference in AM population structure between rotations, with a single phenotypic sub-group of Glomus dominating in all rotation types. There were significant differences in population density, with the shorter rotation (PAP) having the highest spore density in trap culture. The AM spore population distribution in trap cultures of the soils from the low-input system showed marked differences in AM population structure. Although Glomus was the predominant genus, the representation of the phenotypic sub-groups, including a sub-group not found in trap cultures of the high-input system soils, was variable between rotations, with no single dominant phenotypic sub-group. 32 Notable previous studies of the effect of rotation and management level on AM population and colonization of crop plants have been conducted with studies of continuous monocropping of corn (Zea mays) and soybean (Glycine max) (Johnson et al. , 1991; McGonigle and Miller, 1993), different designs of corn - soybean rotations (Johnson et al., 1992; Douds et al., 1993; Kurle and Pfleger, 1994; Kurle and Pfleger, 1996), and long term asparagus (Asparagus ofiicinalis L.) plantings (W acker et al. , 1989). These studies show that AM fungi in the soil respond to the biotic and abiotic changes that occur after extensive monocropping, and during a multi-year corn - soybean rotation. Johnson et a1. (1992) hypothesized that continuous monoculture caused shifts in the AM population resulted in the predominance of AM species that are less beneficial (or detrimental) to the crop plant. This hypothetical shift may thus contribute to the observed yield decline in a monoculture. The AM spore population data from trap cultures of the high-input system in this study show a slight, though statistically significant, shift in spore distribution within Glomus. While recognizing the agreement in results, comparisons between the results of this part of this study, with extremes of two years of continuous potato or potato following two years of alfalfa, with the work of Johnson et al. (1992), which used corn or soybeans following five years of continuous corn or soybeans, should be made with caution. However, the logical conclusion from that previous work, that an interrupted polyculture would prevent the buildup of AM species less beneficial (or detrimental) to the crop, is also supported by the AM spore population data presented herein from trap cultures of the low-input system. These studies of the effect of monocropping/ rotations on AM fungi do not fully address the nature of the mechanisms underlying the effects observed (Johnson et al. , 33 1991; Johnson et al. 1992). Crop residues, particularly leguminous residues, are known to be rich in a complex mixture of compounds, many classes and examples of which are known to be biologically active (Siqueira et al. , 1991a). Of the compounds derived from leguminous organic material, phenolic compounds such as flavonoids and isoflavonoids have been shown to be particularly active in influencing the behavior of soil fungi (Nair et al., 1991; Siqueira et al., 1991a; Siqueira et al., 1991b). Phenolic compounds, such as p-coumeric acid, p-hydroxybenzoic acid, as well as the isoflavones formononetin, biochanin-A and quercitin, have been shown to influence AM colonization in clover (Siqueira et al., 1991b; Fries, 1995) and sorghum (Fries, 1995). Pederson et al. (1991) showed inhibition of AM colonization of asparagus plants with increasing concentrations of the phenolic compounds caffeic acid and ferulic acid. Isoflavones are known to stimulate rapid encystment in parasitic Oomycetes (Carlile, 1983; Morris and Ward, 1992; Deacon and Donaldson, 1993). Vedenyapina et al. (1996) showed that micromolar concentrations of the isoflavone genistein can alter the in vitro growth and reproductive pattern of Phytophthora sojae. The extent to which one crop in a rotation could chemically influence fungal behavior, and particularly AM colonization, of the succeeding crop through phenolic—rich detritus would necessarily be dependent on the extent to which bioactive compounds remain resident in the soil from season to season. Soil organic matter that is carried over winter from one growing season to the next is not degraded until soil temperatures rise in the spring (Francis and Clegg, 1990). Associated nutrients and bioactive compounds are therefore released into the soil environment as temperatures rise and days lengthen; this is the period of most rapid growth of root tissue, and the period of most extensive colonization by AM fungi (Spanu and Bonfante- 34 Fasolo, 1988; Fries et al. , 1996). In consideration of the multi-year persistence of organic detritus, and the timing of the release of the potentially bioactive compounds contained therein, it has been suggested that organic residues from leguminous components of crop rotations constitute an important chemical, as well as physical, contribution (Siqueira et al. , 1991a). Although not well developed, techniques for the chemical management of soil microbiota, including AM fungi, through exogenous applications and selective rotation with crops rich in bioactive phenolics, is an area with important economic possibilities (Siqueira et al. , 1991a). Early season AM spores, produced during the previous crop, can potentially show the types of population effects suggested to occur during a monoculture (Johnson et al. , 1991; Johnson et al. , 1992). In the high-input system, the APP rotation had significantly higher spore numbers in the field than did PAP or AAP, but resulted in lower AM colonization at the end of the season. Despite higher numbers in the early season, the AM population in the APP field was, overall, less effective at colonizing potato than the AM population in either the PAP or AAP field. In the low-input system, where a potato following potato treatment was not used, there were no differences in early season spore numbers, and there were no differences in AM colonization at the end of the season. This suggests that a single season of potato is sufficient to produce the types of changes to the AM populations hypothesized by Johnson et al. (1992). The results presented herein suggest that AM fungi in soils long devoted to potato production respond to crop rotations in a similar fashion to AM fungi in soils long devoted to corn and soybean production, despite the differences inherent in potato production vs. corn/ soybean production. 35 Abbot and Gazey (1994) hypothesized that a diverse AM fungal population may be more beneficial to a crop than a single predominant AM species, since a diverse population may allow greater adaptability to changing cultural and environmental factors. Low-input management has been shown to promote greater AM spore populations than high-input management (Douds et al. , 1993). The low-input nature of the management used on the Butler farm may have allowed the AM population to attain a diversity and concomitant flexibility that was lacking in the high-input farm. Therefore, the specific influences of the different rotations may have been somewhat buffered by the legacy of AM population structure. By extension, a high-input system has a reduced inherent flexibility, and may be therefore more susceptible to the perturbations caused by the different rotations. It should be noted, however, that greenhouse studies have indicated that AM spore production is decreased under conditions of drought stress (Nelsen and Safir, 1982). It may be expected that drought stress may induce a similar reduction in AM spore populations under field conditions. Thus, a non-irrigated system would be more susceptible to diminution in spore number because of drought stress than an irrigated system; the dominance of the effect of water availability on AM spore production may serve to balance the impact of the other inputs of the system. The complex interactions of host plants and AM fungi in potato rotation systems influence crop yield, the AM spore populations in the field, the AM spore reproductive capacity and the resulting colonization of the potato roots. 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Safir. 1982. Increased drought tolerance of mycorrhizal onion plants caused by improved phosphorus nutrition. Planta 154:407-413. Newsham, K.K. , Fitter, AH. and Watkinson, AR. 1993 Arbuscular mycorrhiza protect an annual grass from root pathogenic fungi in the field. J Ecology 83:991-1000. Niemira, B.A., Safir, G.R., Hammerschmidt, R. and Bird, G.W. 1995 Production of prenuclear minitubers of potato with peat-based arbuscular mycorrhizal fungal inoculum. Agron. J. 87:942-946 Pederson, C.T., Safir, G.R., Siqueira, JD. and Parent, S. 1991. Effect of phenolic compounds on asparagus mycorrhiza. Soil Biology and Biochemistry 5:491-494 Phillips, J .M. and D.S. Hayman. 1970. Improved procedures for clearing roots and staining parasitic and vesicular-arbuscular mycorrhizal fungi for rapid assessment of infection. Trans. Brit. Mycol. Soc. 55:158-161. Ponton, F., Y. Piché, S. Parent and M. Caron. 1990. Use of vesicular-arbuscular mycorrhizae in Boston fern production: 11. Evaluation of four inocula. HortScience 25:416-419. Powell, CL. 1984. Field inoculation with VA mycorrhizal fungi, p. 205-222. in: C.L. Powell and DJ. Bagyaraj (eds.). VA mycorrhiza. CRC Press, Boca Raton. Rowe, RC. 1993. Ch.2., pp.ll—18, Potato health management. APS Press, St. Paul, Minn. Siqueira, J .O, Nair, M.G., Hammerschmidt, R., and Safir, G.R. 1991a. Significance of phenolic compounds in plant-soil-microbial systems. Crit. Rev. in Plant Sci. 10 (1):63-121 Siqueira, J .O, Safir, GR. and Nair, M.G. 1991b. Stimulation of vesicular-arbuscular mycorrhizae formation by flavonoid compounds. New Phytol. 118: 87-93 Spanu, P. and P. Bonfante-Fasolo. 1988. Cell-wall-bound peroxidase activity in roots of mycorrhizal Allium porrum. New Phytologist 92:75-87 Stinner, BR. and J .M. Blair. 1990. Ecological and agronomic characteristics of innovative cropping systems. pp. 123-140 in C.A. Edwards, R. Lal, P. Madden, R.H. Miller, and G. House. Sustainable agricultural systems. Soil and Water Conservation Soc., Ankeny, IA Thompson, J .P. 1994. what is the potential for management of mycorrhizas in agriculture? pp. 191-200 in AD. Robson et al. (ed.) Management of mycorrhizas in agriculture , horticulture, and forestry. Kluwer Acad. Publ. , Dordrecht, Netherlands. 40 Vedenyapina, E.G., Safir, G.R., Niemira, B.A., and Chase, T.E. 1996. Low concentrations of the isoflavone genistein influence in vitro asexual reproduction of Phytophthora sojae. Phytopathology 86: 144-148 Wacker, T.L., Safir, GR. and Stephenson, SN. 1989. Evidence for succession of mycorrhizal fungi in Michigan asparagus fields. Acta Hort. 271:273-278 Chapter 2. Production of prenuclear minitubers of potato with peat-based arbuscular mycorrhizal fungal inoculuml Abstract Prenuclear minitubers of potato (Solanum tuberosum L.) are the source material used to produce field-grown seed potatoes. Seed potatoes are in turn planted by commercial growers to produce potatoes for fresh packing and processing. Arbuscular mycorrhizae (AM) have been demonstrated to increase yield in low-input systems. This study was conducted to determine whether and how a commercial AM inoculum influences prenuclear minituber production under high-input commercial conditions. A peat-based medium containing the mycorrhizal fungus Glomus intraradix was tested in a commercial minituber greenhouse production facility. This medium increased yields of the most valuable sizes of prenuclear minitubers by 84% , and increased total prenuclear minituber yield by 49% when compared with conventional peat-vermiculite media under commercial growing conditions. Potato plants grown in this mycorrhizal medium had more uniform stolon development as well as stolons 39% longer than plants grown in the conventional medium. These yield increases and morphological changes occur in the presence of very low levels of mycorrhizal colonization, and there was no evidence of enhanced plant P nutrition generally associated with mycorrhizal symbiosis. These effects may indicate the presence of a hormonally mediated plant response to the 1 This chapter appeared in slightly modified form as Niemira, B.A., Safir, G.R., Hammerschmidt, R. and Bird, G.W. Production of prenuclear minitubers of potato with peat—based arbuscular mycorrhizal fungal inoculum. Agron. J. 87:942-946 (1995) 41 42 presence of the mycorrhizal fungi that results in more uniform stolon growth and an increase in initiation of minitubers. Introduction Arbuscular mycorrhizae are ubiquitous soil fungi that form symbiotic associations with many crop plants (Bagyaraj, 1984). The AM associations can increase plant growth; in many cases by enhancing P uptake from soils with low to moderate P availability (Powell, 1984). Attempts to increase yields under low-P growing conditions through inoculation with fungal propagules have improved yields and nutrition of many field and horticultural crops (Nelsen and Safir, 1982; Johnson & Pfleger, 1992), including potato (Black and Tinker, 1977). Previous studies involving mist-culture inoculation of potato showed a positive effect on vine growth and tuber production (Graham et al. , 1976). The effects of peat-based AM inoculum have been investigated in non-soil substrates commonly used in the production of many horticultural crops (Ponton et al., 1990; Pedersen, 1991). Mycori-Mix, (Premier Peat Moss, Ltd., Riviére- du Loup, Québec, Canada) a commercial peat-based AM inoculum, has been tested on asparagus (Asparagus ofi‘icinalis L.) (Pedersen et al. , 1991) and leek (Allium porrum; syn. A. Ampeloprasum L. Porrum group) (Caron and Parent, 1988), and shown to enhance AM colonization and increase yield. While inoculation with AM can be beneficial in low-input systems, additions of P fertilizer are known to reduce AM colonization of roots (Kiernan et al. , 1983; Abbott and Robson, 1984). Under ample P fertilization, the additional potential P uptake capacity provided by a mycorrhizal association is usually less advantageous (Marschner, 43 1986; Johnson and Pfleger, 1992). There have been no previous reports of significant positive impact of AM inoculum on the production of prenuclear minitubers in a high- fertility system. The relatively high value of prenuclear seed minitubers prompted a study was conducted to determine whether AM inoculum influences prenuclear minituber production under high-input commercial conditions. These conditions, which include high fertility, high water availability and extensive pesticide application, have been previously shown to minimize or eliminate the benefits of AM inoculation (Trappe, 1984; Hayman, 1987). The amount of mycorrhizal colonization of the potato root system was assessed as a measure of the degree of association. Potato stem and leaf P concentration was determined for use as a possible indicator of the degree of benefit derived from the mycorrhizal association. We measured the absolute yields of different sizes of minitubers, which have accordingly different economic values. We also calculated the proportional yields of the most valuable tubers as a fraction of total production. In addition, levels of stolon production and tuber initiation by inoculated and noninoculated plants were examined. Materials and methods The experiments were conducted at Sklarczyk Seed Farms, Johannesburg, NII in commercial minituber production greenhouses from July 1992 through November 1994. The potato cultivar Atlantic was used. Plantlets were micropropagated on-site in agar using sterile tissue culture techniques. Tuber production beds, 120 by 230 by 10 cm, were lined with polyethylene to control drainage, and filled with the growing media (described below). Depressions, approximately 7 cm deep, were made in the medium. 44 The plantlets were split from their micropropagation agar block and placed in the depressions. The beds were thoroughly wetted with a 90-180-90 g L‘1 (N-P-K) nutrient mix before placement in the greenhouse. The greenhouse was open-framed, with a polypropylene barrier. The conditions in the greenhouse were standardized for commercial production. Air temperature was maintained at approximately 24°/ 10°C day/night. Mist-fans were used to maintain relative humidity of 90%. Plants were sprayed weekly with overhead sprinklers throughout the first 6 wks of the growing season using a 90-180-90 g L’1 (N-P-K) nutrient solution. The watering was discontinued at 14 wks and the plants were allowed to senesce. Tubers were harvested at week 16. The normal growing practices of the tuber production facility incorporate the application of a number of different fungicides at different times in the growing period. Timing and dosage of these applications were determined by the grower specifically to eliminate pathogenic fungi. Fungicides were used as 600-ml stock solution diluted and applied with a hand sprayer as described in Table 2.1. Experiment 1: minituber production This study was conducted from July through November 1993 with two types of media in the experimental beds: a sterilized Sphagnum peat (SB Mix, Premier Peat Moss, Ltd.) and a 50:50 (v/v) mixture of noninoculated and inoculated (Glomus intraradix, 1 propagule g“) Sphagnum peat (50:50 SB Mix/Mycori-Mix, Premier Peat Moss, Ltd.). The control beds were filled with the commercial peat-vermiculite mixture (Alpar Peat Co., Ovid, MI) regularly used in these greenhouses. Each type of medium was 45 Table 2.1. Application rate and timing of fungicides used in a greenhouse study of potato minituber production (Exp. 1, July-Nov. 1993, at Johannesburg, MI). 1‘ Weeks post planting. 1: An ornamental fungicide, product of WA Cleary Chemical, Somerset, NJ. 46 Application Fungicide Rate Time g a.i. rn'2 wk PPT metalaxyl + chlorothalonil 0.29 3 [N-(2,6-dimethylphenyl)-N-(methoxyacetyl) alanine methyl ester + tetrachloroisophthalonitrile] carbofuran 0.32 3 [2-3-dihydro-2,2-dimethyl-7-benzofuranyl methylcarbamate] methamidophos 0.58 5, 6 [O,S-dimethylphosphoramideothioate] 3336 WP: 1.09 5, 6, 10 [dimethyl 4,4’-o-phenylenebis-(3-thioallophanate)] iprodione 0.61 7, 10, 11 [3-(3,5-dichlorophenyl)-N-(1-methylethyl)-2,4-dioxo-l- imidazolidinecarboxamide] maneb 1.16 8, 9, 10 [manganese ethylenebisdithiocarbamate] metalaxyl 0.84 9 [N -(2,6-dimethylphenyl)-N-(methoxyacetyl) alanine methyl ester] 47 replicated three times in separate beds. The beds were arranged in a random block design. Experiment 2: stolon development and minituber initiation In April to July 1994, a separate study was conducted at the same tuber production facility to evaluate the effect of AM inoculation on stolon development and tuber initiation. Six beds were filled with the inoculated medium mix, and another six beds filled with the conventional peat-vermiculite medium. Plants were removed from the beds once each week during the first 4 wk, and analyzed for length of individual stolons, total length of stolon material per plant, number of stolons per plant, and number of tuber initiates per stolon. At the end of the growing periods, the minitubers were harvested and sorted by size. Small tubers have a diameter less than 2.2 cm, medium tubers have a diameter between 2.2 and 3.3 cm, and large tubers have a diameter greater than 3.3 cm. Small and medium tubers are the sizes most valued for commercial use. These sizes correspond to the relative economic value of the tubers, and results from the agricultural machinery currently in wide use in the United States potato industry (D. Sklarczyk, Sklarczyk Seed Farms, personal communication, 1993). AM root colonization assay Plant roots were cleared and stained with Trypan blue according to Phillips and Hayman (1970). Root colonization by AM was determined by the line-intersect method (Kormanik and McGraw, 1982). Phosphorus concentration of stem + leaf tissue was determined using the method of Nelsen and Safir, 1982. Statistical analysis 48 Data were analyzed with multivariate one-way AN OVA (analysis of variance) using the statistical package Minitab. Results Experiment 1: minituber production Potato plants grown in inoculated peat have total minituber yields significantly (P s 0.05) greater than those produced from the conventional commercial medium (Table 2.2). The difference in yield represents a 49% increase in total tuber production and an 84% increase in the production of small and medium minitubers. Potato vines grown in the inoculated peat produced a proportion of total yield comprised of the most valuable tubers that was significantly (P s 0.05) greater than that produced using the conventional commercial medium (Table 2.2). The proportion of small and medium tubers from inoculated peat was 69.0% of the total tuber mass produced, compared with 55.5 % of the total tuber mass produced from the bed filled with the conventional medium. Sampling of commercial beds from the same greenhouse confirmed that the yields from the control beds in our experiment were equivalent to the normal commercial yields from the rest of the same greenhouse. The SB Mix growing medium did not significantly increase yields in this experiment, nor in three subsequent experiments. The P levels of the plants showed no significant difference among the treatments (Table 2.3). The AM colonization levels in subsequent samplings were uniformly low. No colonization was found in plants from noninoculated treatments, and no colonization was observed after eight wks post-planting. This experiment was repeated three 49 Table 2.2. Prenuclear minituber yield of potato grown in the greenhouse with and without arbuscular mycorrhizae (Exp. 1, July-Nov. 1993, Johannesburg, MI; mean of three samples). 1' Control: standard commercial peat-vermiculite mix. Peat: sterilized Sphagnum peat. Peat + AM, sterilized Sphagnum peat + arbuscular mycorrhize. 1 Within rows, means followed by the same letter are not different (P s 0.05). 50 Yield Growing mediumT Control Peat Peat+A M Small + medium tubers, kg rn’2 1.46azl: 2.09ab 2.70b Total yield, kg m'2 2.63a 3.20ab 3.91b Small + medium as % of total 55.5a 65.6ab 69.9b 51 Table 2.3. Phosphorus concentration of stem + leaf tissue and arbuscular mycorrhizal (AM) colonization level of potato roots grown in the greenhouse (Exp.1, July-Nov. 1993, Johannesburg, MI; mean of three samples). 1' Control: commercial peat-vermiculite. Peat: sterilized Sphagnum peat. AM: arbuscular mycorrhizae. 1' ND: colonization not detected 52 Week post Growing media‘i' Planting Control Peat Peat P s 0.05 +AM P concentration, pg P mg" dry wt. 5 2.71 1.78 2.40 NS 8 8.71 6.18 6.22 NS 10 11.68 8.49 7.63 NS Colonization % 5 0.3 0.5 1.5 NS 8 ND: ND ND - 14 (harvest) ND ND ND - 53 additional times at the same tuber production facility, with similar yield, P concentration and colonization results. Experiment 2: stolon development and minituber initiation The study conducted from April through July 1994 demonstrated that AM inoculation caused dramatic effects on stolon development and tuber initiation, as shown in Table 2.4. Plants from the inoculated beds had stolons 39% longer (P S 0.05) than those from the control beds. The total length of stolons per inoculated plant was increased by 31% (P s 0.05). The inoculated plants’ production of longer individual stolons did affect the number of stolons supported per plant. Inoculated plants tended to have more tuber initiates per stolon. The plants showed no significant differences in mycorrhizal colonization and tissue P levels (Table 2.5). The data obtained from the inoculated beds showed dramatically less variability than that from the control beds. Although the means do not differ significantly until the fourth week, the entire data set is of interest because the standard deviations derived from the control data were larger than those derived from inoculation data by two-, three- or even fivefold (Table 2.4). This suggests that inoculated plants had more uniform stolon development. This was visible as early as three wks after planting. To better demonstrate this reduced variability, the total length of stolon material produced per plant is shown as a histogram (Figure 2.1). At 2 wk, the inoculated and the control plants had a similar total stolon production per plant. At 3 wk, total stolon production by the control plants ranged widely, in contrast with that of the inoculated plants. At 4 54 Table 2.4. Stolon and tuber initiate development of potato grown in the greenhouse with and without arbuscular mycorrhizae (Exp.2, Apr.-July 1994, Johannesburg, MI; means of six beds). T Control: commercial peat-vermiculite. Peat sterilized Sphagnum peat. AM: arbuscular mycorrhizae. i No stolons were present at 1 wk post planting. § Within rows, means followed by the same letter are not significantly different (P s. 0.05). 55 Growing mediaT Factor examined Commercial Peat + AM Week 2:1: Mean SD Mean SD avg. stolon length, cm 3.72a§ 0.79 3.63a 0.61 total stolon length, cm 5.19a 2.91 4.80a 2.66 stolons, no. plant" 1.33a 0.67 1.22a 0.58 initiates, no. stolon" 0.07a 0.16 0.03a 0.08 Week 3 avg. stolon length, cm 7.77a 1.98 8.66a 0.76 total stolon length, cm 31.96a 17.19 30.94a 3.20 stolons, no. plant" 4.06a 2.02 3.39a 0.57 initiates, no. stolon" 1.11a 0.28 1.34a 0.18 Week 4 avg. stolon length, cm 11.68a 1.89 16.22b 1.46 total stolon length, cm 58.99a 18.48 77 .12b 9.05 stolons, no. plant" 5.11a 1.20 4.78a 0.27 initiates, no. stolon" 1.59a 0.57 1.98a 0.65 56 Table 2.5. Phosphorus concentration of stem plus leaf tissue and colonization level of potato roots grown in the greenhouse with and without arbuscular mycorrhizae (Exp. 2, Apr.-July 1994, Johannesburg, MI; means of six beds). 1‘ Control: commercial peat-vermiculite. Peat sterilized Sphagnum peat. AM: arbuscular mycorrhizae. 1; ND: colonization not detected 57 Week post Growing media'i' planting Control Peat + AM P S 0.05 P concentration, pg P mg" dry wt. 4 11.34 10.48 NS 8 10.61 10.54 NS Colonization % 4 NDi 0.4 - 8 0.1 0.2 NS 58 Figure 2.1. Total length of stolon material (cm) produced per potato plant, by ranges of production, (Exp.2, Apr.-July 1994, at Johannesburg, MI). Each of the six samples per treatment represents the average of three plants. The data from each of the six inoculated (INOC) and the six control (CTRL) beds are expressed as total stolon production per plant (cm). Weeks post planting. Samples Samples Samples 59 6" a 5 x 2weeks — \ :Control 4 _ § Inoculated 3- s s 2“ \ \ 1* s o_ s 5_ 3weeks 4_ 3_ 2“ \ \ 1— x \ § V 0 DH s s s 88 5_ 4weeks 4- 3- 1‘ s 0 . . . H. . is . . <10 <20 <30 <40 <50 <60 <70 <80 <90 <100 Total stolon length per plant (cm) 60 wk, the inoculated plants had a greater total stolon production in addition to reduced variability in length. The average length of individual stolons and the number of stolons per plant showed similar distributions (data not shown). This suggests more uniform growth of stolons under inoculation. This experiment was repeated at the same tuber production facility, with similar results. Discussion Benefits from AM inoculation are generally associated with nutritional effects resulting from a mature symbiosis (Hayman, 1987). However, we found the peat-based AM inoculum beneficial even in the absence of a mature association. Inoculation increased the total production of prenuclear minitubers grown in a greenhouse. By increasing the proportion of the total production represented by the most valuable sizes, the AM inoculum increased the value of the tubers produced. Inoculation with AM also results in an increase in average stolon length and total stolon production per plant; these increases are associated with dramatically reduced variability of stolon growth and development (Table 2.4). The greater uniformity in the inoculated treatments suggests that AM may influence stolon growth associated with AM inoculation. The effect of Glomus fasciculatus and G. mosseae on potato grown in mist-culture has been previously shown to increase the vine dry weight (Graham et al. , 1976). In addition, G. fasciculatus increased the number of tubers produced, which may have been the result of an increased rate of tuber initiation after planting (Graham et al. , 1976). The extremely low AM colonization levels we observed were probably due to the high nutritional growing conditions, and also to the application of a combination of 61 fungicides beginning after the third wk of the growing period (Table 2.1). The effects of many commercial fungicides, singly and in combinations, on AM activity are not fully understood (Menge et al. , 1979; Johnson and Pfleger, 1992; Kurle and Pfleger, 1994). However, several of the fungicides used in our study (e.g. maneb, metalaxyl, and the metalaxyl + chlorothanlonil combination) have each been shown to be highly detrimental to AM activity at higher concentrations (Trappe, 1984). These concentrations correspond to the application rates used in our study, and those used in many commercial settings. In 1977, Black and Tinker (1977) demonstrated the effects of field—scale AM inoculation in the field production of potatoes, and the influence of P fertilization. Potato plants were grown in a non-irrigated field with high superphosphate applications. Experimental fields were treated with highly AM-infective topsoil from a barley (Hordeum vulgare L.) field, while control fields received less infective topsoil from a fallow field. The infective topsoil contained a mixed-culture of AM, with G. macrocarpus being the dominant species. The plant tissue samples from these two treatments did not differ in P concentration and showed uniformly low early AM colonization, ranging from 0.9% to 4.0%. This study confirms the results of Black and Tinker (1977), and shows similarly low early AM colonization levels (Tables 3 and 5). Although Black and Tinker (1977) reported no difference in final potato yield between the inoculated and non-inoculated treatments, the results of this study showed a significant increase in yield of the inoculated vs. the non-inoculated treatments under identical fertilization regimes. In addition to the differences between the above field study and our greenhouse study, the mixed-culture soil inoculum source Black and Tinker (1977) used was primarily G. macrocarpus as opposed to the peat-based pure-culture G. 62 intraradix inoculum used in our study. This difference in inoculum composition is significant, as host responses are known to differ with different fungal species, and with mixed vs. pure culture inoculum (Bethlenfalvay, 1992). Establishment of mycorrhizal symbiosis induces early biochemical changes in the plant (Dumas et al., 1989; Hilbert et al., 1991) and in the fungus (Fries et al., 1993; Ozan et al. , 1993). In the early stages of the AM colonization, the plant symbiont elicits a transitory, weak defense response comparable to the strong response elicited by pathogen infection (Gianinazzi and Gianinazzi-Pearson, 1992; Volpin et al., 1994). These plant responses may be hormonally regulated, as is carbon allocation to roots, to reproductive structures and to the fungal symbiont (Marschner, 1986; Spanu et al. , 1989). Evidence of AM colonization causing biochemical changes is well established (Allen et al., 1982; Marschner, 1986), but hormonal responses of host plants to AM colonization are not conclusive (Bonfante-Fasolo and Spanu, 1992; Hock et al. , 1992). Foliar application of cytokinin has been demonstrated to increase tuber yield of some potato varieties (Lang and Langille, 1984). In this study, AM inoculation causes increased stolon production and increased tuber production. These may be the result of a hormonally-mediated regulation of the processes leading to these physiological effects. Our results also suggest that the increased tuber production may be due to a shift in carbon allocation induced in the plant during the early stages of AM colonization. This shift may have increased the rate of tuber initiation by altering the pattern of stolon development. The developmental changes (e.g. stolon morphology) that persist in the absence of a continually developing AM association suggest a hormonally-mediated 63 response. In addition, there was no evidence of early senescence of stolons, which could lead to a later proliferation of stolons and tuber initiates. Growth promotion associated with low early AM colonization levels was also demonstrated by O’Keefe and Sylvia (1992) using sweet potato (Ipomoea batatas L.) Enhanced P inflow in that sweet potato study preceded extensive AM hyphal proliferation. In contrast, the AM beds in this study showed significantly increased yields without an associated increase in plant P concentration. Similar growth increases in the absence of P concentration effects were reported in sweetgum (Liquidambar styraciflua) (Schultz et al. , 1979), and in asparagus using the same AM inoculum as we have used here (Pedersen et al. , 1991). In a 1994 report, Volpin et al. showed an AM- induced increase in isoflavonoid production in alfalfa (Medicago sativa L.) under very low levels of hyphal colonization in the root tissue. Thus, they suggested that the presence of AM in the rhizosphere was sufficient to induce biochemical changes in the root tissue, even in the absence of a mature AM association. Volpin et al. were using alfalfa grown under high P levels in sterile sand inoculated with the same AM species used in our study, G. intraradix. The increased uniformity of stolon development and the increased formation of minitubers observed in our study may thus result from a S. tuberosum response to the rhizosphere proximity of G. intraradix propagules similar to the response of alfalfa demonstrated by Volpin et al. (1994). Our results also indicate that AM inoculation can be effective for increasing prenuclear minituber production. To emphasize the significance of these results, consider a hypothetical prenuclear minituber greenhouse production facility of 100ml. At a market value of $55/kg for the small and medium minitubers and $19/kg for large 64 minitubers (R. Chase, Michigan State University, personal communication, 1994), a 100m2 greenhouse facility using the commercial practices described herein will yield approximately $10 300 worth of minitubers. All other inputs held constant, the same facility using the AM inoculum regime described herein would yield approximately $17 100 worth of minitubers. Although use of this inoculum may have a similar effect on field-grown seed tubers, the increased input cost of the inoculum suggests that its most practical application would be for higher value, greenhouse-grown seed tuber crops. The positive effects presented in this study were unrelated to high AM colonization or enhanced plant P nutrition, and occurred despite applications of specific fungicides previously shown to be inimical to AM colonization. The presence of AM inoculum in the rhizosphere is beneficial, even in the absence of a mature AM association. These benefits may derive from a transient stimulation of the plants’ defense response resulting in a more uniform rate of development of stolon tissue. Further work is necessary to fully understand the mechanisms of this rhizosphere proximity interaction. 65 Literature cited Abbott, L.K., and AD. Robson. 1984. The effect of VA mycorrhizae on plant growth p. 113-130 In Powell, CL. and DJ. 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Varma (ed) Methods in microbiology Vol. 24 Academic Press Limited, New York, NY Caron, M., and S. Parent. 1988. Definition of a peat-lite medium for the use of vesicular-arbuscular mycorrhizae (VAM) in horticulture. Acta Hort. 221 :289-294 Dumas, E. , V. Gianinazzi-Pearson, and S. Gianinazzi. 1989. Production of new soluble proteins during VA endomycorrhiza formation Agriculture, Ecosystems and Environment 29: 111-114 Fries, L.L.M., R.S. Pacovsky, and GR. Safir. 1993. Expression of isozymes altered by Glomus intraradix or formononetin application in corn roots. p. 130 In Peterson, L. and M. Schelkle Abstracts of the 9th North American Conference on Mycorrhizae, Guelph, Ontario, Canada August 8-12, 1993 University of Guelph Gianinazzi, S. , and V. Gianinazzi-Pearson. 1992. Cytology, histochemistry and immunocytochemistry as tools for studying structure and function in endomycorrhiza p.109-l39 In Norris, J.R., D.J. Read and A.K. Varma (ed) Methods in microbiology Vol. 24 Academic Press Limited, New York, NY 66 Graham, 8.0., N .E. Green, and J. W. Hendrix. 1976. The influence of vesicular- arbuscular mycorrhizae on growth and tuberization of potatoes. Mycologia 68:925-929 Hayman, D.S. 1987. VA Mycorrhizae in field crop systems p.171-192 In Safir, G.R. (ed) Ecophysiology of VA Mycorrhizal plants, CRC Press, INC. Boca Raton, FL Hilbert, J .L., G. Costa, and F. Martin. 1991. Ectomycorrhizin synthesis and polypeptide changes during the early stage of eucalypt mycorrhiza development Plant Physiol. 97:977-984 Hock, B., S. Liebmann, H. Beyrle, and K. Dressel. 1992. Phytohormone analysis by enzyme immunoassays p.249-274 In Norris, J.R. , D.J. Read and A.K. Varma (ed) Methods in microbiology Vol. 24 Academic Press Limited, New York, NY Johnson, N.C. , and F .L. Pfleger. 1992. Vesicular-arbuscular mycorrhizae and cultural stresses p. 71-99 In Bethlenfalvay, G.J. and R.G. Linderman (ed) Mycorrhizae in sustainable agriculture, American Society of Agronomy, Inc. Madison, WI Kiernan, J .M., J.W. Hendrix, and D.M. Maronek. 1983. Fertilizer-induced pathogenicity of mycorrhizal fungi to sweetgum seedlings Soil Biol. Biochem. Vol. 15, No. 3, 257-262 Kormanik, P.P. , and AC. McGraw. 1982. Quantification of vesicular-arbuscular mycorrhizae in plant roots. p.37-45 In Schenck, N .C. (ed) Methods and principles of mycorrhizal research APS Press, St. Paul, MN Kurle, J .E. , and EL. Pfleger. 1994. The effects of cultural practices and pesticides on VAM fungi p. 101-132 In Pfleger, EL. and R.G. Linderman (ed) Mycorrhizae and plant health APS Press, St. Paul, MN Lang, D.J. , and AR. Langille. 1984. Influence of plant growth and concentration of cytex and kinetin applications on tuber yields of two potato cultivars HortScience 19(4), 582-583 Marschner, H. 1986. Mineral nutrition of higher plants p.469-475 Academic Press INC. San Diego, CA Menge, J .A., E.L.V. Johnson, and V. Minassian. 1979. Effect of heat treatment and three pesticides upon the growth and reproduction of the mycorrhizal fungus Glomus fasciculatus New Phytol. 82:473-480 Nelsen, C.E. , and GR. Safir. 1982. Increased drought tolerance of mycorrhizal onion plants caused by improved phosphorus nutrition. Planta 154:407-413 O’Keefe, D.M. , and D.M. Sylvia. 1992. Chronology and mechanisms of P uptake by mycorrhizal sweet potato plants New Phytol. 122:651-659 67 Ozan, A.G., R.S. Pacovsky, and GR. Safir. 1993. A unique malate dehydrogenase isozyme of endomycorrhizal white clover roots and the associated effects of the isoflavone formononetin on isozyme activities. p.133 In Peterson, L. and M. Schelkle Abstracts of the 9th North American Conference on Mycorrhizae, Guelph, Ontario, Canada August 8-12, 1993 University of Guelph Pedersen, C.T., G.R. Safir, S. Parent, and M. Caron. 1991. Growth of asparagus in a commercial peat mix containing vesicular-arbuscular mycorrhizal (VAM) fungi and the effects of applied phosphorus. Plant and Soil 135:75-82 Phillips, J.M. , and D.S. Hayman. 1970. Improved procedures for clearing roots and staining parasitic and vesicular-arbuscular mycorrhizal fungi for rapid assessment of infection. Trans. Brit. Myc. Soc. 55:158-161 Ponton, F ., Y. Piché, S. Parent, and M. Caron. 1990. Use of vesicular-arbuscular mycorrhizae in Boston fern production: 11. Evaluation of four inocula. HortScience 25:416-419 Powell, C .L. 1984. Field inoculation with VA mycorrhizal fungi p. 205-222 In Powell, CL. and DJ. Bagyaraj (ed) VA Mycorrhiza, CRC Press, Inc. Boca Raton, FL Schultz, R.C., P.P Kormanik, W.C. Bryan, and G.H. Brister. 1979. Vesicular- arbuscular mycorrhiza influence growth but not mineral concentrations in seedlings of eight sweetgum families Can. J. For. Res. 9, 218 Spanu, P., T. Boller, A. Ludwig, A. Wiemken, A. Faccio, and P. Bonfante-Fasolo. 1989. Chitinase in roots of mycorrhizal Allium porrum: regulation and localization Planta 177:447—455 Trappe, J.M., R. Molina, and M. Castellano. 1984. Reactions of mycorrhizal fungi and mycorrhiza formation to pesticides Ann.Rev.Phytopathol. 22:331-59 Volpin, H., Y. Elkind, Y. Okon, and Y. Kapulnik. 1994. A vesicular arbuscular mycorrhizal fungus (Glomus intraradix) induces a defense response in alfalfa roots Plant Physiol 104:683-689 Chapter 3. Postharvest Suppression of Potato Dry Rot (Fusarium sambucinum) in Prenuclear Minitubers by Arbuscular Mycorrhizal Fungal Inoculum1 Abstract Arbuscular mycorrhizae (AM) have been shown to increase plant resistance to root-rotting pathogens. This study was conducted to determine whether a commercial peat-based medium containing the AM fungus Glomus intraradix (Schenck & Smith) could influence a) postharvest progression of tuber dry rot in prenuclear minitubers of potato (Solanum tuberosum), and b) activity of the defense related enzyme peroxidase (POX). Minitubers grown in this medium had significantly less tuber dry rot (20-90% reduction) when later inoculated with the dry rot fungus Fusarium sambucinum relative to minitubers grown in an identical peat-based medium without the AM fungus. This disease suppression was also demonstrated in a high-input commercial greenhouse, and occurred despite only trace levels of AM colonization of the parent plants, and with no evidence of enhanced plant P nutrition or differences in minituber mineral content. Protein extracts from four week old potato roots colonized by AM show a significantly reduced peroxidase activity vs. noncolonized roots. These results suggest that the AM fungal inoculum has potential for use in suppression of tuber dry rot of potato. 1 This chapter was submitted in modified form to the American Potato Journal as Niemira, B.A., Hammerschmidt, R., and Safir, G.R. Postharvest suppression of potato dry rot (Fusarium sambucinum) in prenuclear minitubers by arbuscular mycorrhizal fungal inoculum. 68 69 Introduction The F usarium dry rots of potato (Solanum tuberosum L.) are among the most important postharvest pathogens worldwide (Rowe, 1993). Current methods for control of F usarium dry rot rely on cultural practices and chemical treatments (Kawchuk et al. , 1994; Rowe, 1993), rather than biological control (Jarvis, 1992). Associations between plant roots and arbuscular mycorrhizal (AM) fungi can increase plant growth, in many cases by enhancing P uptake from soils with low to moderate P availability (Powell, 1984). While inoculation with AM fungi can be beneficial in low-input systems, conditions that limit AM fungal colonization of roots and associated benefits include high P availability (Abbott and Robson, 1984), high water availability (Hayman, 1987), and extensive fungicide application (Trappe et al., 1984). Peat-based commercial AM fungus inocula tested in the production systems of many horticultural crops have enhanced AM fungi colonization and increased yield (Ponton et al., 1990; Pedersen et al., 1991). AM fungi can also reduce the severity of damage caused by plant pathogenic nematodes and fungi (Linderman, 1992). Newsham et al.,(1993) suggest that in Vulpia ciliata ssp. ambigua (Le Gall), the main benefit of AM fungi is protection from pathogenic fungi, rather than from improved P uptake. Investigations of disease suppression promoted by AM fungi have focused on pathogens of the host plant (Newsham et al. ,1993; Linderman, 1992). AM-induced suppression of storage pathogens on the resulting produce in a post-harvest setting is, to our knowledge, unexplored. A seed potato minituber grower (D. Sklarczyk, Sklarczyk Seed Farms, Johannesburg, MI.) noted that minitubers produced by plants exposed to a commercial 70 AM fungal inoculum had reduced storage rot levels. The purpose of the research reported herein was to determine the effect of AM fungal inoculum on the postharvest progression of tuber dry rot caused by Fusarium sambucinum (Gibberella pulicaris) in potato minitubers, and on the activity levels of peroxidase (POX), a defense-related enzyme involved in lignin synthesis. Materials and methods Storage rot: research greenhouse Plants were grown from prenuclear (produced from tissue cultured plants) minitubers of potato (cv. Atlantic) in research greenhouses at Michigan State University, with daily watering and fertilization with 1 L 90-180-90 g L" (N-P-K) at 3 and 6 wk. The inoculated experimental medium consisted of Mycori-Mix (Premier Peat Moss, Ltd. , Riviére-du Loup, Québec, Canada), a Sphagnum peat-based medium inoculated with approx. one propagule of the AM fungi fungus Glomus intraradix per gram. The non- inoculated medium consisted of the identical Sphagnum peat-based medium without AM (SB Mix, Premier Peat Moss, Ltd., Riviére-du Loup, Quebec, Canada). Each media was replicated four times in separate growing beds (18" by 14" by 4", 45 cm by 35 by 10 cm). Plants were grown under sodium vapor lights (14h/10h light/dark) for 10 weeks. After 10 weeks, minitubers were harvested, and potato root samples were collected for assay of AM colonization. Minitubers harvested from each of the four beds from each treatment were combined and stored at Michigan State University at 4°C for 5 months, and subsequently challenged with F. sambucinum. This 71 experiment was repeated in four additional replications, and the data from these five experiments were pooled (final population size, n=49). Storage rot: commercial greenhouse Tissue cultured plantlets of potato cv. Atlantic were grown in a commercial minituber production greenhouse at Sklarczyk Seed Farms, Johannesburg, MI under high- input conditions, including frequent watering, and frequent foliar fertilization with 90- 180-90 g L" (N-P-K). The commercial practices used at this facility included soil drenches with pesticides following the third week after planting. Pesticides used of particular significance included the fungicides metalaxyl + chlorothalonil (0.29 g a. i./m2) and maneb (1.16 g a.i./m2), and the insecticide carbofuran (0.32 g a.i./m2). The inoculated experimental medium consisted of a 50:50 (vzv) mixture of sterile SB Mix and the AM containing Mycori-Mix, the mixture used in a previous study (Niemira, et al., 1995). The noninoculated medium consisted of a similar steam- pasteurized peat-based mixture (Alpar Peat Co. , Ovid, Mich.) used in these greenhouses. The treatments were replicated six times in separate growing beds (4’ by 8’ by 4", 120 cm by 240 cm by 10 cm). Plants were grown for 14 weeks. Samples of root, stem and leaf tissue were collected at 4 weeks and 8 weeks after planting. After the 14 week growing period, the minitubers were harvested from each of the six beds from each treatment. These subsamples were combined and stored at Michigan State University at 4°C for 5 months, and subsequently challenged with F. sambucinum. Tuber pieces were dried and analyzed for mineral content by the Michigan State University soil and plant nutrient laboratory. This experiment was repeated at the same tuber production facility, and the data from the two experiments were pooled (final population size, n=16). 72 Root protein extraction and sample preparation Potatoes were grown in the same type of media as for the storage rot studies conducted in the research greenhouse. At four weeks after germination, five plants grown in sterile and AM inoculated media were harvested. The root system was subsampled for AM colonization. The remaining root system was washed in water at 0°C, then immediately wrapped in foil and frozen in liquid nitrogen. The root samples were stored at -80°C until use. The roots were ground to a fine powder in a stainless steel pestle using liquid nitrogen. To extract root protein contents, powdered root tissue were mixed with grinding buffer (0.75 ml g" root powder) containing 50 mM Tris-HCl pH 7.0, 3.0 mM ethylenediamine tetraacetic acid, 2.5 mM dithiothreitol, 250 mM sucrose, 50 mM NaCl, 2 mM phenylrnethylsulfonyl fluoride, and 2 mM N-ethyl- maleirnide (Pacovsky, 1989). The chilled samples were homogenized with a tissue grinder (Tekrnar, Cincinnati, OH). The liquified extract was centrifuged for 10 minutes at 12K rpm at 4°C (Marathon 21K/BR, Fisher Scientific, Chicago, IL). The supernatant containing the root proteins was transferred to rnicrocentrifuge tubes and frozen at -80°C. Protein concentrations of the samples (pg protein/p1 extract) was determined using the Bradford dye-binding assay, with bovine y-globulin as a standard (Biorad, Richmond, CA). Total peroxidase assay Measurement of total peroxidase activity was determined using a modified version of Ridge and Osborn (1970). For each sample, 2 pg of protein were added to 5 ml of a pH 5.5 phosphate buffer solution containing 10mM H202 and 20 mM guiacol. Optical density at 480 nm was recorded every 30 seconds for 10 minutes. The slope of the 73 linear portion of the data set (0.5 min. to 3.5 min.) for each replicate was determined, and expressed as 00D“;0 min" mg protein ". Five replicates from each treatment were assayed. AM root colonization assay Plant roots were cleared and stained with Trypan blue according to Phillips and Hayman (1970). Root colonization by AM was determined by the line-intersect method (Kormanik and McGraw, 1982). P concentrations of stem + leaf tissue (Exp’t. 2) were determined using the method of Nelsen and Safir (1982). Fusarium sambucinum challenge Stored minitubers of each treatment were randomly selected and allowed to equilibrate in the dark at room temperature (z23°C) for 24 h. A circular wound z4 mm, was made through the tuber periderm. A 5-mm plug of PDA taken from the edge of a day-old culture of F. sambucinum colony growing on PDA was placed top down onto the wound (culture provided by R. Hammerschmidt, Dept. Botany and Plant Pathology, Michigan State University). The inoculated tubers were stored in the dark for 14 days at room temperature (z23°C) and then bisected. The depth, and width of the rotted tissue was measured. The volume of rotted tissue was estimated with a conic approximation using these measurements. Statistical analysis Storage rot data and 00D480 min" mg protein " of the total POX activity were analyzed with one-way AN OVA (analysis of variance) using the statistical package Minitab. 74 Results Storage rot: research greenhouses Severity of tuber dry rot caused by F. sambucinum is reduced by 30-74% in tubers that were produced in medium containing AM fungi (Table 3.1). Minitubers grown in AM inoculum had significantly less (P s 0.01) rotted tissue by all measurements (depth, width and volume). AM colonization of the roots of inoculated plants was moderate (15.4%), while colonization of non-inoculated plants was negligible (5 1%). Storage rot: commercial greenhouses Severity of tuber dry rot caused by F. sambucinum is reduced by 21-58% in tubers that were produced in medium containing AM fungi under high-input commercial growing conditions (Table 3.1). The pattern of disease reduction is similar to that shown by tubers grown in research greenhouses. The depth, width and volume of rotted tissue are significantly reduced (P $0.05). There were no significant differences in stem + leaf tissue P levels between treatments. Analysis of tuber mineral content, including micronutrients known to affect progression of diseases (Graham and Webb, 1991), e.g. B, Ca, Cu, Fe, Mn and Zn, showed no significant differences between treatments. In this experiment, unlike that conducted in the research greenhouses, levels of root colonization by the mycorrhizal fungus were negligible (S 1%) in plants taken from inoculated and non-inoculated treatments. Root protein total POX activity The average oOD480 min" mg protein " of control potato roots not colonized by AM was 12.288, while the average aOD480 min" mg protein " of potato roots that 75 Table 3.1. Progression of fusarium dry rot2 in potato minitubers grown in nonmycorrhizal (CTRL) and mycorrhizal (INOC) growing media. 2 Reductions are statistically significant at P5005 (*) and P5001 (**). ’ Data are followed in parenthesis by percent of control. " Volume is calculated as a conical approximation with the following equation: Volume = «(breadth/2)2 *1r) *depth)/ 3 76 Medium Depth Breadth Volume (mm)y (mm (mm3)" Research greenhouse CTRL 6.59 13.33 694.8 INOC 4.02 (60.9)“ 9.27 (69.5)“ 183.3 (26.3)** Commercial greenhouse CTRL 4.69 12.06 203.4 INOC 2.94 (62.7)** 9.56 (79.3)" 84.8 (41.8)** 77 colonized by AM was 9.23. This reduction is suggestive (P 50.10), although not significant. Discussion The results presented herein represent what may be the first demonstration of postharvest disease suppression caused by the presence of AM fungi inoculum during minituber production. Increased disease resistance to plant pathogens resulting from inoculation with AM fungi had previously been associated primarily with root-infecting pathogens (Newsham et al., 1993; Linderman, 1992; Benhamou et al., 1994). AM related disease reduction effects often are associated with enhanced nutrition resulting from a mature AM symbiosis (Hayman, 1987). The results from experiments conducted in the commercial greenhouses show that peat-based AM fungal inoculum can enhance postharvest disease resistance in the absence of nutritional differences. The progression of a variety of rot pathogens in potato tubers can be influenced by the concentrations of mineral nutrients within the tissues (Huber, 1991; Graham and Webb, 1991). As there were no differences in the mineral content of the tubers grown in the different media in our study, it seems unlikely that the effects observed arise from a purely nutritional effect. These effects are shown in tubers, which are modified stem tissue, rather than in true seed (see Koide and Lu, 1992). The negligible levels of mycorrhizal colonization observed in commercial greenhouses were probably due to the high nutritional growing conditions, as well as application of pesticides after the third week after planting (see Niemira et al. ,1995). The effects of many commercial fungicides, singly and in combinations, on AM fungi activity are not understood fully (Kurle and Pfleger, 1994). However, several of the pesticides applied in the commercial 78 greenhouse in the course of the experiments (e. g. , metalaxyl + chlorothalonil, carbofuran, and maneb) are detrimental to AM fungi activity at concentrations corresponding to the levels used (Trappe et al. , 1984). Previous studies have shown that early AM inoculation can cause specific changes in plant physiology, even in the absence of a mature association. These changes can include alterations in tuber initiation patterns and stolon production in potato (Niemira et al. , 1995), increased rooting of grape (Vitus vinifera) cuttings (G.R. Safir, unpublished data) and increased survivalship and rooting of umbrella pine (Sciadopitys verticillata) cuttings (Douds et al. , 1995). Studies into the effect of AM inoculation on survivorship and rooting of yew (T axus spp.) are ongoing (R. Schutski, unpublished data). The absence of a developed root system in the case of woody cuttings precludes extensive root colonization by AM fungi; that physiological alterations are still observed lends credence to the suggestion that extremely low levels of AM colonization can significantly impact growth and plant vigor. In the early stages of AM association, the fungus elicits a transitory, weak plant defense response comparable to the strong response elicited by pathogen infection (V olpin et al. , 1994). Under low to moderate fertility in the research greenhouses, AM fungal inoculum caused moderate AM colonization of the parent plants. In contrast, the high- input growing conditions in the commercial greenhouses prevented the development of a mature AM symbiosis, and limited AM root colonization of the parent plants to negligible levels. The significantly reduced levels of Fusarium dry rot in the minituber progeny in both series of experiments, even in the absence of a mature AM association as in the commercial greenhouses, suggest that the plant’s transitory antagonistic response 79 was initiated within the first few days or weeks of growth in the presence of AM inoculum. At four weeks, the total root tissue POX activity of AM colonized potatoes tended to be less than that of the noncolonized control. Reduction in total POX activity after 3-4 weeks of exposure to the AM fungus has previously been observed in leek, Allium porrum, (Spanu and Bonfante-Fasolo, 1988), corn, Zea mays, (Fries et al. , 1996), and clover, T rifolium repens (Ozan, 1996). In these previous studies, POX activity during the initial stage (1-2 weeks) of the symbiosis increased, and after the initial stages of the AM symbiosis, the host apparently suppresses this particular defense response. This suppression occurs during the period of the most rapid spread of the AM fungus throughout the root system, and it is felt that this suppression facilitates root colonization (Spanu and Bonfante-Fasolo, 1988; Fries et al., 1996). The published information relating to POX activities associated with AM colonization is therefore somewhat in contrast to POX activities associated with induced resistance. Previous studies of induced systemic resistance in cucumber, Cucumis sativus, and tobacco, Nicotiana tabacum, have reported increased POX activity after exposure to eliciting agents such as tobacco mosaic virus on tobacco (Simons and Ross, 1970; van Loon, 1976), and pathogenic bacteria and heat shock on cucumber (Hammerschmidt et al. , 1982; Stermer and Hammerschmidt, 1984). Increased POX activity indicates an increased level of lignin synthesis, a deterrent modification that inhibits the spread of the pathogen, a condition that is in precise opposition to the reduced POX activity levels in roots involved in AM associations. POX’s role in defense related lignin synthesis has been proposed as a possible mechanism for induced systemic resistance in cucumber (Hammerschmidt and Kuc, 1982). The assumption that POX is 80 the primary mechanism of induced resistance leads to the conclusion that the suppression of POX activity in AM associations would tend to make AM-colonized plants more susceptible to disease. Studies of disease susceptibility in mycorrhizal plants (Newsham et al. , 1993; Linderman, 1992) have concluded that colonization by AM fungi tends to decrease, rather than increase disease susceptibility. Stermer’s (1995) suggestion that induced systemic resistance consists of several mechanisms rather than POX as the single motive force resolves this question. The transitory increase in POX activity shown in other mycorrhizal systems (Spanu and Bonfante-Fasolo, 1988; Fries et al. , 1996; Ozan, 1996) may serve to induce a response similar to systemic resistance. Reduced POX activity levels of the root protein extracts clearly indicates coordinated biochemical changes in the potato plant physiology, suggesting a systemic response. AM fungi have been associated with induction of a variety of host metabolic changes that enhance resistance to disease, such as induction of phenolic compounds (Dehne, 1982; Krishna and Bagyaraj , 1983) and chitinases with potential antimicrobial properties (Spanu et al. , 1989; Benhamou et al. , 1994). The reduction of Fusarium dry rot severity presented herein may be a form of AM-induced systemic resistance (Hammerschmidt and Kuc, 1995) that is maintained in the tuber progeny. Alternatively, the reduction may be a result of some action of the AM fungi directly on the surface of the minitubers, or a combination of these factors. The AM-induced reduction of F usarium dry rot was apparently unrelated to high levels of AM fungal root colonization, enhanced plant nutrition, or changes in the tuber mineral nutrient content. A detailed explanation has not yet been formulated for the seemingly contradictory condition of an AM-induced reduction at 4 weeks in total root POX activity that is coincident with an 81 increased resistance to the spread of F. sambucinum in tuber tissue. Based on the response to F usarium oxysporum f. sp. chrysanthemi of mycorrhizal and non-mycorrhizal Ri T-DNA-transforrned carrot roots, Benhamou et al. 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Carbohydrate, protein and amino acid status of Glycine-Glomus- Bradyrhizobium symbiosis. Physiologia Plantarum 75:346-354 Pedersen, C.T., G.R. Safir, 8. Parent and M. Caron. 1991. Growth of asparagus in a commercial peat mix containing vesicular-arbuscular mycorrhizal (V AM) fungi and the effects of applied phosphorus. Plant Soil 135175-82. Phillips, J .M. and D.S. Hayman. 1970. Improved procedures for clearing roots and staining parasitic and vesicular-arbuscular mycorrhizal fungi for rapid assessment of infection. Trans. Brit. Mycol. Soc. 55:158-161. WIT- 84 Ponton, F. , Y. Piché, S. Parent and M. Caron. 1990. Use of vesicular-arbuscular mycorrhizae in Boston fern production: H. Evaluation of four inocula. HortScience 25:416-419. Powell, C.L. 1984. Field inoculation with VA mycorrhizal fungi, p. 205-222. in: C.L. Powell and DJ. Bagyaraj (eds.). VA mycorrhiza. CRC Press, Boca Raton. Rowe, RC. 1993. Potato health management. APS Press, St. Paul, Minn. Sirnons, T]. and A.F. Ross. 1970. Enhanced peroxidase activity associated with induction of resistance to tobacco mosaic virus in hypersensitive tobacco. Phytopathology 60:383-384 Spanu, P. and P. Bonfante-Fasolo. 1988. Cell-wall-bound peroxidase activity in roots of mycorrhizal Allium porrum. New Phytologist 92:75-87 Spanu, P., T. Boller, A. Ludwig, A. Weimken, A. Faccio and P. Bonfante-Fasolo. 1989. Chitinase in roots of mycorrhizal Allium porrum: regulation and localization. Planta 177 :447-455 Stermer, BA. and R. Hammerschmidt. 1984. Heat shock induces resistance to Cladosporum cucumerinum and enhances peroxidase activity in cucumber. Physiological Plant Pathology 25:239-249 Stermer, BA. 1995. Molecular regulation of systemic induced resistance. pp. 111-140 In Hammerschmidt, R. and J. Kuc. 1995. Induced resistance to disease in plants. Kluwer Academic Publishers, Dordrecht, Netherlands. Trappe, J .M., R. Molina and M. Castellano. 1984. Reactions of mycorrhizal fungi and mycorrhiza formation to pesticides. Ann. Rev. Phytopathol. 22:331-59. van Loon, LC. 1976. Systemic acquired resistance, peroxidase activity and lesion size in tobacco reacting hypersensitively to tobacco mosaic virus. Physiological Plant Pathology 82231-242 Volpin, H. , Y. Elkind, Y. Okon and Y. Kapulnik. 1994. A vesicular-arbuscular mycorrhizal fungus (Glomus intraradix) induces a defense response in alfalfa roots. Plant Physiol. 104:683-689. Chapter 4. Summary and Conclusions AM fungi respond to crop rotations and input level, with input high chemical inputs associated with irrigation being the more dominant of the two factors. On the basis of the results of experiments presented in Chapter 1, I would recommend, therefore, that in order to manage the population of AM fungi in the soil, the management decisions that are most key are those that involve chemical and irrigation inputs. Additional field experimentation could be conducted to establish the impact of varying chemical and irrigation levels for a given rotation, and the impact of other rotations within the particular management framework. The extent to which specific crops in the rotations (particularly legumes) contribute AM-stirnulatory bioactive compounds to the soil, and the relative significance and/ or duration of this stimulus, is not fully known. Soil sampling could be conducted to test for the presence of known plant produced compounds with bioactive properties. This sampling could be for extracted residues from plant detritus from crops earlier in the rotation, or as percentage recovery of a known amount of exogenously applied compound. These experiments could be used in conjunction with efforts to design novel rotation structures, perhaps incorporating unconventional crops such as canola, in order to identify crops that are especially effective at encouraging healthy AM populations. Inoculation of potato plants in a high chemical and water input greenhouse growth environment with AM fungi results in significantly increased yield and significantly increased percentage of small and medium prenuclear seed minitubers. These alterations in the yield are of economic importance because of the high value (SSS/kg) of the 85 86 prenuclear seed minitubers in general, and the small and medium minitubers in particular. AM inoculation also results in longer stolons, more stolon produced per plant and reduced variability in stolon production. I would therefore recommend that AM inoculum be incorporated into standard bedding material for prenuclear minituber production facilities. The series of experiments presented in Chapter 2 was conducted entirely with the cultivar Atlantic, which tends to produce smooth, regular tubers. Other cultivars, such as Russett Burbank, produce tubers that are more irregular. Although characters such as shape and regularity are less significant in seed tubers, they are quite important in determining the value of a crop of field-grown tubers. Smooth, regular tubers can be used for baking and chipping, while knobby or irregular tubers are used for lower-value applications. In light of the observed reduction in variability of stolon production, additional experiments could be conducted to determine the effect of inoculation with AM fungi on the surface features of characteristically irregularly shaped varieties such as Russett Burbank. Inoculation of potato plants with AM fungi results in tubers that are more resistant to Fusarium storage rot. Controls for Fusarium rot are primarily cultural in nature, as there are few effective chemical controls for this pathogen. The results of the experiments presented in Chapter 3 strengthen the recommendation that AM inoculum be incorporated into standard bedding material for prenuclear minituber production facilities. Although more smooth and regular, tubers of the cultivar Atlantic tend to be more susceptible to storage rot than tubers of other varieties such as Russet Burbank. Experiments could be conducted to evaluate the susceptibility of AM-inoculated tubers of other varieties, either more susceptible or less susceptible than Atlantic, to Fusarium 87 storage rot. Also, tests with storage pathogens other than F usarium sambucinum should be conducted. An application that controls a broad variety of pathogens would have numerous potential applications for potato producers. Further experiments could be conducted to determine if tubers from field-grown potato plants exhibit a similar response to AM inoculation. The disease susceptibility of tubers from a field with high AM colonization potential could be compared with tubers from a field with low AM colonization potential. The results of this experiment may allow for more specific recommendations to field tuber growers. The physiology of potato plants grown in AM inoculum is significantly altered, even in the absence of a mature mycorrhizal association, and that AM fungi induce a response in potato similar to systemic induced resistance. Experiments could be conducted to explore this phenomenon. These could include attempts to more firmly establish a time course of the response to a transitory AM stimulus, biochemical analysis to identify specific alterations in the physiology of tuber periderrn tissue or leaf intercellular fluid isozyme activities. APPENDIX Appendix A A Theoretical Study of the Association of Arbuscular Mycorrhizal Colonization with Border Cell Production‘ Abstract Border cells (BC, formerly referred to as sloughed root cap cells) are produced at the root tip. Species in different families produce different numbers of BC per root tip. A survey of the mycorrhizal literature suggests that BC production is positively correlated with colonization by arbuscular mycorrhizal (AM) fungi; families which produce thousands of BC per root tip (e. g. Fabaceae and Cucurbitaceae) tend to be heavily colonized by AM, families which produce hundreds of BC per root tip (e.g. Solanaceae) tend to be less heavily colonized by AM, while families which do not produce BC (e.g. Brassicaceae and Chenopodiaceae) are not colonized by AM. This previously unknown correlation suggests a causational role of BC and/or BC produced signal molecules in the AM symbiosis. Introduction Arbuscular mycorrhizae (AM) are ubiquitous soil fungi that form symbiotic associations with many plant species, including most significant crop plants (Bagyaraj, ‘ This chapter appeared in slightly modified form as Niemira, B.A., Safir, GR. and Hawes, M.C. Arbuscular mycorrhizal colonization and border cell production: a possible correlation. Phytopathology 86:563-565 1996. 88 89 1984; Walker, 1995). The AM associations can increase plant growth, in many cases by enhancing P uptake from soils with low to moderate P availability (Powell, 1984). A given plant species’ AM propensity, i.e. the extent to which the root system of an individual plant is colonized by the AM symbiont, may vary under different conditions, e.g. natural soils vs. disturbed agricultural soils. This variability can arise from differences in AM inoculum composition, soil nutrient availability, and plant community composition (Linderman, 1992). Plant families may be generally, although not perfectly, categorized by the AM propensities of plant species within that family (Gerdemann, 1968; Tester et al.,1987). Many families in the order Caryophyllales are considered minirnally- or non-mycorrhizal; of these, Brassicaceae and Chenopodiaceae have received the most attention (Tester et al.,1987). Baylis (1975) hypothesized that a species’ mycorrhizal propensity is related to root morphology. Species with thick, unbranched roots and few root hairs are more heavily dependent on mycorrhizal associations, either endomycorrhizal or ectomycorrhizal, than are species with finely branched roots and numerous root hairs. The primary exception to the Baylis hypothesis is the family Ericaceae, the species of which have very finely branched roots in addition to large numbers of hyphal connections with ericacious endomycorrhizal fungi (Harley and Smith, 1983). Despite this exception, Baylis’ connection between root anatomy and mycorrhizal propensity is a widely accepted generalization (Manjunath and Habte, 1991). Many plants release metabolically active border cells (BC) from the root cap into the rhizosphere (Hawes, 1990; Hawes and Lin, 1990). These cells undergo differentiation upon separation from the root, including distinct patterns of gene expression (Brigham et al. , 1995b). Border cells (previously referred to as "sloughed root 90 cap cells") are defined as those cells that are released into suspension by a brief immersion into water (Hawes and Brigham, 1992). Different plant families vary considerably in their capacity to produce BC, ranging from zero BC per root (e.g. Brassicaceae and Chenopodiaceae) to thousands of BC per root (e. g. Fabaceae and Cucurbitaceae) (Hawes and Pueppke, 1986). BC production is consistent between species within a given family (Hawes and Pueppke, 1986), typically varying between 10-20%. Materials and Methods Reference list collection Hawes and Pueppke (1986) determined the BC production levels of a number of species, from a variety of families. Brigham et al. ,( 1995b) presented the average BC production for a variety of families. In these studies, BC production was measured in aseptic, newly-germinated seedlings. I surveyed mycorrhizal literature to collect AM colonization data for over 40 plant species. I associated the published AM colonization data for many of the species with the average BC production data of its family; this is appropriate, given the comparatively low variability of BC production within families (Hawes and Pueppke, 1986; Brigham et al.,1995a). Wherever possible, however, I associated the AM colonization data with BC production values determined for that particular species (Hawes and Pueppke, 1986). The AM colonization references used were taken for consistency of data collection technique and for the breadth of species tested, rather than for any other criteria. The growth conditions under which the AM colonization data were collected varied; this broad based data set is specifically desirable in order to fully test the suggestion of an AM-BC correlation. 91 Statistical analysis The data from the six families best represented in the data set (Fabaceae, Poaceae, Amaranthaceae, Solanaceae, Brassicaceae, Chenopodiaceae) were subjected to cluster analysis using the statistical program NCSS. Results AM colonization, BC production The collection of data is presented in Table A. 1. The AM percent colonization in this collection of references refers to the percent of AM colonized root fragments as determined by the line intersect method, a widely used measure of AM association (Brundrett and McGonigle, 1994). Cluster analysis Cluster analysis of the plot of AM colonization % vs. the log transform of the number of BC produced per root places the data into distinct clusters (Figure A. 1). These clusters correspond to families which are minimally- or non-mycorrhizal, moderately mycorrhizal and highly mycorrhizal. Discussion The data from the literature suggests a connection between a family’s AM propensity and its capacity to produce BC. The production of BC appears to be strongly correlated with mycorrhizal colonization. In general, families that were BC capable had a mycorrhizal propensity, while families that were not BC capable were minimally- or non-mycorrhizal (e. g. Brassicaceae and the Chenopodiaceae). The data used to formulate 92 Table A. 1. Arbuscular mycorrhizal (AM) colonization and border cell (BC) production. 3 AM% is percent root colonization. b BC: Border cell production is in number of cells released per root. Border cell production data is species specific (*, from Hawes and Pueppke, 1986) or the average for the family (**, from Brigham et al. , 1995a). 93 Family Species AM BCb Ref. % a Fabaceae Glycine max 77 3260* Skipper and Struble (b) Fabaceae Glycine max 63 3260* Pacovsky, et al. Fabaceae Glycine max 63 3260* Skipper and Struble (a) Fabaceae Glycine max 47 3260* Zambolim and Schenck Cucurbitaceae Cucumis sativus 69 3070* Pearson and J akobsen Fabaceae Phaseolus vulgaris 70 3070* Kucey, et al. Fabaceae Phaseolus vulgaris 58 3070* Daft and El- Giahami Fabaceae Phaseolus vulgaris 20 3070* Kruckleman Fabaceae Coronilla varia 85 3000** Daft, et al. Fabaceae Robinia hispida 44 3000** Daft, et al. Fabaceae Robinia 66 3000** Daft, et al. pseudacacia Fabaceae T rifolium repens 88 3000** Kruckleman Fabaceae Vicia sativa 98 3000** Kruckleman Malvaceae Gossypium hirsutim 69 3000* Smith and Roncadori Malvaceae Gossypium hirsutim 55 3000* Price, et al. Fabaceae Pisum sativum 70 2680* Jakobsen and Nielsen Poaceae Zea mays 73 2350* Kruckleman Poaceae Zea mays 20 2350* Daniels- Hetrick, et al. Poaceae Agrostis tennuis 41 2150** Daft, et al. Poaceae Dactylis glomerata 38 2150** Daft, et al. Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Poaceae Agavaceae Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae 94 F estuca arudinaceae F estuca ovina Holcus lanatas Lolium perenne Poa annum Poa compressa Avena sativa Avena sativa Avena sativa Secale cereale Secale cereale T riticum aestivum Triticum aestivum T riticum aestivum Triti cum aestivum T riticum aestivum Yucca baccata Achyranthes aspera Achyranthes aspera Aerva javanica Altemanthera sessilis Amaranthus caudatus Amaranthus caudatus Amaranthus crucutus 62 41 84 46 30 13 78 48 28 41 35 76 70 68 50 40 45 34 15 2150** 2150** 2150** 2150** 2150** 2150** 1645* 1645* 1645* 1485* 1485* 1195* 1195* 1195* 1195* 1195* 1050** 140** 140** 140** 140** 140** 140** 140** Daft, et al. Daft, et al. Daft, et al. Daft, et a1. Kruckleman Daft, et al. Strzemska Kruckleman Wang, et al. Strzemska Jakobsen and Nielsen Strzemska Dodd and Jefferies Dodd, et al. Jakobsen and Nielsen Kruckleman Daft, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae Amaranthaceae Solanaceae Solanaceae Solanaceae Solanaceae Solanaceae Solanaceae Brassicaceae Brassicaceae Brassicaceae Brassicaceae Chenopodiaceae Chenopodiaceae Chenopodiaceae 95 Amaranthus gracilis Amaranthus persica Amaranthus spinosus Celosia argentia Celosia argentia Celosia cristata Celosia cristata Capsicum annum Solanum nigrum Solanum tuberosum Solanum tuberosum Lycopersicon esculentum Lycopersicon esculentum Arabidopsis thaliana Brassica napus Capsella bursa-pastoris Raphanus vulgaris Beta vulgaris Chenopodium album Spinacia oleracea 47 12 35 60 26 46 4 1 38 57 28 25 48 42 15 140** 140** 140** 140** 140** 133* 133* 63* 55** 55** 55** 16* 16* O** O** 0*III 0*!!! O** 0** 0101! Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Neeraj, et al. Haas and Krikun Kruckleman Wang, et al. Kruckleman Kruckleman Caron, et al. Kruckleman Dodd, et al. Kruckleman Kruckleman Kruckleman Kruckleman Kruckleman 96 Figure A. 1. Cluster analysis of the major families represented in the data set (Fabaceae, Poaceae, Amaranthaceae, Solanaceae, Brassicaceae, Chenopodiaceae), log(BC) vs. AM colonization. Patterns represent distinct clusters. AM colonization (%) 110 97 100 — 90- 80— 70— 60— 50— 40—. 30— C) Fabaceae Cl Poaceae A Amaranthaceae V Solanaceae O Brassicaceae <> Chenopodiaceae A V A V A l I l I l l T 0.5 1.0 1.5 2.0 2.5 3.0 3.5 log(BC) 4.0 98 this hypothesis also seemed to suggest that the range of AM propensity may follow the range of BC capability. This is supported by cluster analysis, which shows that distinct clusters corresponding to intersections of AM propensity/BC capability. Thus, plants that produce larger numbers of BC appeared to have a greater mycorrhizal propensity, while plants that produce fewer BC appeared to have a lesser mycorrhizal propensity. Species in the family Amaranthaceae were shown to produce BC on the order of hundreds of BC per root, comparable with the established mycorrhizal family Solanaceae (Brigham et al. ,19953). On the basis of increasing evidence, AM colonization of species in this family is more widespread than was previously believed (Saif and Iffat, 1976; Saif et al.,1977; Neeraj et al.,1991). An early review of the mycorrhizal status of plants (Gerdemann, 1968) included the Amaranthaceae in a list of families that were considered to be "possibly non-mycorrhizal or rarely mycorrhizal". Gerdemann’s review (1968) incorrectly cited Koch (1961) as the basis for this assertion, because Koch (1961) did not mention the Amaranthaceae. In light of the most recent data regarding the mycorrhizal status of the Amaranthaceae, this example of BC capability in a mycorrhizal family, previously thought to be non-mycorrhizal, tends to support this hypothesis. The family Pinaceae also is of particular interest among the families surveyed for BC production (Hawes and Pueppke, 1986; Brigham et al. ,1995a). Species in the family Pinaceae were determined to produce 3000 to 5500 BC per root (Hawes and Pueppke, 1986). The species in this family are known to exhibit a characteristically obligate dependence on ectomycorrhizal fungi in nature (Harley and Smith, 1983). This example of BC capability in a family with a strong ectomycorrhizal propensity suggests that our hypothesis may possibly be broadened to include ectomycorrhizal, as well as AM 99 interactions. However, the larger data set of BC production by ectomycorrhizal plant species needed to reliably expand this hypothesis is lacking. There are other interesting physiological points about a possible AM-BC connection. Many plant-produced compounds are known to have a profound impact on soil pathogens, even at very low concentrations (Morris and Ward, 1992; Vedenyapina et al. , 1996). Upon dissociation from the root, BC generate a novel complement of gene products that are rapidly released into the external medium (Brigham et al. ,1995b). The area of the rhizosphere distal to the root cap where the majority of BC are distributed is also the primary site of root penetration by AM and by a variety of important fungal root pathogens (Agrios, 1988; Harley and Smith, 1983; Hawes, 1990; Hawes and Brigham, 1992). BC have been shown to be specifically chemoattractive to pythiaceaous fungi (Goldberg et al.,1989). Thus, I speculate that BC-produced bioactive compounds may influence the behavior of the mycorrhizal population in the rhizosphere. Conventional root studies probably exclude the BC, and therefore exclude from consideration gene products generated exclusively in the BC (Hawes and Pueppke, 1986). The hypothesis put forward by Brigham et al. , (Brigham et al. , 1995b) that BC constitute a uniquely specialized tissue of the root system, may have important implications for the role of BC- produced compounds in the establishment of mycorrhizal symbioses, as well as in the course of development of root pathogens. This is, to my knowledge, the first discussion of a positive association of AM colonization with BC production. This hypothesis, that mycorrhizal colonization is correlated with BC production, should be evaluated by further experimentation. These experiments could include i) a more complete determination of the mycorrhizal status of 100 species in the family Amaranthaceae; ii) measurement of BC production by species in verifiably non-mycorrhizal families other than Brassicaceae and Chenopodiaceae; iii) measurement of BC production by species in Ericaceae, a family with a strong ericoid endomycorrhizal propensity; iv) measurement of BC production by other species in Pinaceae, a family with a strong ectomycorrhizal propensity; and v) measurement of the AM propensity of mutants of characteristically mycorrhizal species which have been rendered incapable or less capable of producing BC. Preliminary results of ongoing experiments to determine the AM propensity of species in Amaranthaceae (Celosia cristata, Gomphrena globosa, Amaranthus tricolor, Amaranthus caudatus) suggest that these species are fully capable of sustaining an AM association (unpublished results). The overall physiological significance of BC has not been fully elucidated, nor has the role of BC-produced compounds. Hopefully, an evaluation of this hypothesis will lead to a greater understanding of the role that BC and BC-produced compounds may play in the establishment of mycorrhizal associations. 101 Literature cited Agrios, G.N. 1988. p.262-510 Plant Pathology, 3rd Edition. Academic Press, Inc. New York. Bagyaraj, DJ. 1984. VA Mycorrhizae: Why all the interest? p. 1-4 In Powell, C.L. and DJ. Bagyaraj (ed) VA Mycorrhiza. CRC Press, Inc. Boca Raton, FL Baylis, G.T.S. 1975. The magnolioid mycorrhiza and mycotrophy in root systems derived from it. p.373-389 In Sanders, F.E., Mosse, B. and Tinker, P.B. (ed) Endomycorrhizas. Acad. Press, New York Brigham, L.A., H.H. Woo, and MC. Hawes. 1995a. Root border cells as tools in plant cell studies. p.377-387 In Methods in cell biology. Vol 49. Acad. Press, New York Brigham, L.A., H.H. Woo, S.M. Nicoll, and MC. Hawes. 1995b. 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