THE ESOLATEGN PM) PE‘fi’SZCAL-CEEMECAL CHARAC'E'ERIZA’WN (3!: A, {SLYQDF‘ROTEIN FROM THE PROTEOSEPEPTONL FRACTEGN 0F COWS MfiLK Thesis: fer the Degree cf Ph. 0. MICHIGAN STATE UNIVERSITY WESU C. MG 1%? ‘— m hug-L LIBRARY 3 Michigan State 2 University ' rt THEE!» This is to certify that the thesis entitled The Isolation and Physical-Chemical Characterization of a Glyc0protein from the Proteose-Peptone Fraction of Cow's Milk presented by Wesu C. Ng has been accepted towards fulfillment of the requirements for Ph.D. degree inFood Science Major professor 9 7 /fl gMfi/A Lanvkkx Date June 16, 1967 ABSTRACT THE ISOLATION AND PHYSICAL-CHEMICAL CHARACTERICATION OF A GLYCOPROTEIN FROM THE PROTEOSE-PEPTONE FRACTION OF COW'S MILK by wesu c. Ng The proteose-peptone fraction of milk is a group of heat-stable, minor proteins Which are not precipitated by heating skimmilk to 95° C for 30 minutes and subsequent acidification to pH 4.7. Three main components of the proteose-peptone fraction have been designated as components 3, 5 and 8 in free-boundary electrophoretic patterns. Com- ponent 3 referred to in this study is the slowest moving, electrophoretically homogeneous component in acrylamide gel electrOphoretograms. Procedures were developed for isolating component 3 from both heated and unheated skimmilk. An enriched prepara- tion of component 3 was obtained from the acid-whey superna- tant of heated skimmilk by fractionation with ammonium sulfate (55% saturation). The precipitate obtained contained component 3 in high concentration. Similarly, an enriched component 3- preparation was obtained from unheated skimmilk by fractiona- tion of the crude globulin fraction with ammonium sulfate. Electrophoretically homogeneous preparations were isolated from the enriched preparations by a preparative-scale acryla- mide gel electrophoretic technique. ‘ Nesu C. Hg A distribution study of the proteose-peptone components in whey and casein by ultracentrifugal methods and isoelectric precipitation indicated that component 3 was present only in whey and mainly in the classical lactoglobulin fraction. Chemical analysis showed that component 3 was low in nitrogen (13.1%) and high in carbohydrate (17.2%). The carbo- hydrate portion contained 7.2% hexose, 1.0% fucose. 6.0% hexosamine and 3.0% sialic acid. The carbohydrate moities were identified by paper chromatography and consisted of galactose. mannose, glucosamine. galactosamine and sialic .aoid. The phoSphorus and sulfur contents were 0.5 and 0.59 per cent reSpectively. Amino acid analyses revealed that component 3 was low in the aromatic amino acids tyrosine and phenylalanine: in the sulfur containing amino acids (no cysteine and cystine, lowmethionine): and high in glutamic acid, lysine and leucine. The chemical compositions of com- ponent 3, from heated and unheated skimmilk, were similar. The ionic mobility of component 3 in veronal buffer (pH 8.6, ionic strength = 0.2) was 3.5 Tiselius units in the descending pattern. The estimated isoelectric point from free-boundary electrophoretic eXperiments was pH 3.7. The sedimentation coefficient in veronal buffer (pH 8.6, ionic strength = 0.1) was estimated at 4.0 S units at infinite dilution. The dif- fusion coefficient in the same veronal buffer was estimated at D30 = 1.8 x 1.0-7 cmZ/sec at infinite dilution. Sedimenta- tion-equilibrium studies showed that the weight-average molecu- lar weight of component 3 in veronal buffer (pH 8.6, ion Wesu C. Ng strength = 0.1) was concentration dependent. The polymer- monomer equilibrium was shifted toward the light component in the presence of a dissociating system such as 5 M guanidine hydrochloride. The equilibrium molecular weight in veronal-5 M guanidine hydrochloride was estimated at 40,000 at infinite delution. THE ISOLATION AND PHYSICAL-CHEMICAL CHARACTERIZATION OF A GLYCOPROTEIN FROM THE PROTEOSE-PEPTONE FRACTION OF CON'S MILK By Wesu C. Ng A THESIS Submitted to Michigan State University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Department of Food Science 1967 ACKNOWLEDGEKENT The author eXpresses his most sincere appreciation to Dr. J. R. Brunner for his guidance, counsel and interest dur- ing this study. Grateful acknowledgement is due to Dr. B. S. Schweigert. Chairman of the Department of Food Science, for providing financial support. The author is also indebted to Mr. K. C. Rhee for performing the ultracentrifugal eXperiments and to Mr. C. W. Kolar who has contributed to this study. 11 TABLE OF INTRODUCTION . . . . . . . . C OLE TE \ Y l‘xl TS REVIEW or LITERATURE . . . . . . . . . . . . . . . . PART I The Preparation and Isolation of Heated’and Unheated Skimmflk INTRODUCTION TO PART I . . . EXPERIRENTAL EETHODS . . . . Apparatus . . . . . . . Chemicals and Buffers . Preparatory Procedure . Procedure for Enriched heated skimmilk Procedure for Enriched Unheated skimmilk . Procedure for Checking Componentg3gfrom Component Component b) 3 from from the Effect of Gel Buffer pH on the Carbohydrate Content of the Purified Component 3 Preparation Isolation Procedure for Component 3 from the Enriched Fraction by Preparative Acrylamide Gel ElectrOphoresis Distribution of Component 3 in Casein Protein Fractions . Ultracentrifugation Isoelectric Precipitation RESULTS AID DISCUSSION . . . Preparation of Enriched Component and Unheated Skimmilk 3 and Whey from Heated Effect of Gel Buffer pH on the Carbohydrate Content of the Purified Component 3 Preparation . . . . iii 18 20 23 23 24 26 26 27 Isolation of Component 3 from the Enriched Fraction . . . . . . . . . . . . . . . Distribution of Component 3 in Casein and SUI'IAIIY TC P111132? I o o o o o o o o o o o PART II Properties of Component!) . . . . . . . . . . IETBODUCTICQ TC PART II . . . . . . . . . . . EXPERILEHTAL . . . . . . . . . . . . . . . . . Apparatus . . . . . . . . . . . . . . . . Chemicals . . . .'. . . . . . . . . . . . Chemical Lethods . . . . . . . . . . . . Amino Acid Analysis . . . . . . . . litro:en . . . . . . . . . . . . . . PhoSphorus . . . . . . . . . . . . . Sulfur . . . . . . . . . . . . . . . Tryptophan . . . . . . . . . . . . . Cysteine . . . . . . . . . . . . . . Rexose . . . . . . . . . . . . . . . Eucose . . . . . . . . . . . . . . . Hexosanine . . . . . . . . . . . . . Sialic Acid . . . . . . . 3 . . . . Paper Chromatographic Identification Carbohydrates . . . . . . . . . . Physical Hethods . . . . . . . . . . . . Free-Eonndary Electrophoresis . . . bltracentrifugation . . . . . . . . iv of‘ C 0 O O . O ‘\ I“ '~.;\ K it Kn kn \n \Jt "Q VJ“ Sedimentation-Velocity . . . . . . . Sedimentation-Equilibrium . . . . . Diffusion Coefficient . . . . . . . RESULTS AND DISCUSSION . . . . . . . . . . . . . . Chemical Composition . . . . . . . . . . . . . Physical Properties of Component 3 . . . . . . Electrophoretic Characteristics . . . . . “Ultracentrifugal Characteristics . . . . Diffusion Coefficient . . . . . . . Sedimentation Coefficient . . . . . Sedimentation-Equilibrium Studies of Molecular Weights . . . . . . . . SUl‘iltARY TO PART II o o o o o o o o o o o o o o o o LIPERATLTRE CITED 0 o o o o o o o o o o o o o o o o 81 82 83 86 109 TABLE 1. 10. LIST OF TABLES Colorimetric values for hexcse content of purified component 3 exposed to buffers of various pH values as determined by the Orcinol-Sulfuric acid method . . . . Folin-Ciocalteu colorimetric values for "total protein" content to determine the number of precipitation steps required for effective removal of acrylamide from protein extract . . . . Amino acid composition of component 3 (heated and unheated preparations) . . . Elementary analysis of component 3 from . heated and unheated skimmilk . . . . . . The carbohydrate contents of component 3 from heated and unheated skimmilk . . . Minimum molecular weights of component 3 (heated preparation) estimated from chemical analysis . . . ,,, . . . . . . Electrophoretic properties of component 3 (heated preparation) in various buffers Diffusion coefficient of component 3 (heated preparation) in veronal and veronal-5 M GU buffers O O O O O O O O O O O O O I O Sedimentation coefficient of component 3 (heated preparation) in veronal and veronal-5 M GU buffers o o o o o o 6.0 o Equilibrium molecular weight data for com- ponent 3 (heated preparation) in veronal and veronal-5 M GU buffers o o o o o o 0 vi Page 33 3t 88 89 9O 91 92 93 94 9'5 LIST OF FIGURES FIGURE _ Page 1. Procedure followed for obtaining enriched com- ponent 3 from heated skimmilk . . . . . . . . 35 2. Procedure followed for obtaining enriched com- ponent 3 from.unheated skimmilk.. . . . . . . 36 3. Colorimetric values (Orcinol-Sulfuric acid method) for hexose contents of purified component 3 exposed to buffers of various pH values 0 O O O O O O O O O O O O O O O O 0 38 u. Folin-Ciocalteu colorimetric values for "total protein" content to determine the number of precipitation steps required for effective removal of acrylamide from protein extract . 39 5. Procedure followed for obtaining protease- peptone components from casein and whey by ultracentrifugation . . . .w. . . . . . . . . #0 6. Procedure followed for obtaining proteose- peptone components from casein and whey by isoelectric precipitation at pH h.6 . . . . . hi 7. Acrylamide gel electrophoretic patterns of protecse-peptones obtained from the prepara- tive scheme (Figure 1) . . . . . . . . .,. . #2 8. Acrylamide gel electrophoretic patterns of ' proteose-peptone and various whey protein .fractions as designated in the isolation SChemegFimezooeeooooooooooM 9. Acrylamide gel electrophoretic patterns of enriched component 3 (heated preparation) eXposed to buffers of various pH for 12 hours 0 O O O O - O O O O O O O O O O I O O O O “6 10. The preparative electrophoretic sell used in the isolation of component 3 from the enriched fraction . . . . . . . . . . . . . . “7 11. -Acry1amide gel electrOphoretic patterns of purified component 3 from two side strips of the preparative gel . . . . . . . . .1. . 48 vii FIGURE Page 12. Acrylamide gel electrophoretic patterns of component 3 isolated from the preparative- scale acrylamide gel electrophoresis . . . . 49 13. Acrylamide gel electrophoretic patterns of proteose-peptones obtained from casein and Whey o o o e o o o o o o o o o o o o o o 51 14. Amino acid prOfiles of component 3 from heated and unheated skimmilk . . . . . . . . . . . 96 15. Paper chromatogram of the hydrolysis-released carbohydrate moities of component 3 (heated preparation).. a o o e o o o o o o o o e c o 97 16. Free-boundary electrophoretic patterns of com- ponent 3 (heated preparation) in buffers Of various pH 0 o o o o o o e o o o o c a o .99 17. A plot of electrophoretic mobilities (descend- ing values) of component 3 as a function of pH 0 C O O O O C O O O O O C O O O O O O O O 100 18. Plot showing concentration dependence of the apparent diffusion coefficient of component 3 (heated preparation) in veronal and veronal-5 M guanidine hydrochloride buffer . 101 19. Plot showing the concentration dependence of the sedimentation coefficient of component 3 (heated preparation) in veronal and veronal;5 M guanidine hydrochloride buffer . 102 20. Plot showing concentration dependence of equi- librium molecular weight of component 3 (heated preparation) in veronal buffer . . . 103 21. Plot showing concentration dependence of equi- librium molecular weight of component 3 (heated preparation) in veronal-5 M guanidine hydrochloride buffer . . . . . . . 104 22. Sedimentation-velocity and sedimentation- equilibrium patterns for component 3 (heated preparation) in veronal buffer (pH 8.6: ionic strength = 0.1) . . . . . . . 105 23. Sedimentation-velocity and sedimentation- equilibrium patterns for component 3 (heated preparation) in veronal-5 M guanidine hydrochloride buffer . . . . ... . 107 viii LIST OF APPENDICES Page APPENDIX PART I o o o o o c o o o a c e e o e o o o o 118 Preparation of the classical proteose-peptone fraCtion O O O O I O O O O O O O O O O O 0 O O O 118 Composition of the buffers employed in thiS~ Study 0 O O O O O O O O O O O O O O O O O O O O O 119 Formulation for StarCh-urea gel 0 o o e c o o o c o 120 Preparations of discontinuous buffers, staining solution and destaining solution for prepara- .tive acrylamide gel electrophoresis and starch- urea gel electrophoresis . . . . . . . . . . . . 120 Reagents used in Orcinol-Sulfuric acid method . . . 1211; Reagents used in Folin-Ciocalteu colorimetric reaction . . . . . . . . . . . . . . . . . . . . 121 APPENDIXPARTII.........'.......... 122 Standard curves for the colorimetric determina- tions of phoSphorus, tryptophan. cystein. hexose, hexosamine and sialic acid . . . . . . . 122 Buffer preparations used in free-boundary elec- trophor9818 e o o o c o o o o o o o o o o o o o o 129 Composition of veronal buffer used in ultracen- trifugal and diffusion runs . . . . . . . . . . . 130 PrOperties of the solvents used for molecular weight calculations and correction of the , sedimentation and diffusion coefficients to water 0 O O O O O O O O O O O O I O O O .- O O O O. 130 Correction of the observed 8 to standard condi- . . tions 0 o o o o o o o o o o o o o o e o o 0’. o c '131 Correction of the observed diffusion coefficient ' to standard conditions . . . . . . . . . . . . . '131 Calculation of partial Specific volume . . . . . . 132 Sedimentation equilibrium method for molecular weight determination . . . . . . . . . . . . . . 134 ix NOtation O O O O O O O O O O O O 0 O O O O O O 0 Example calculation . . . . . . . . . . . . . . Calculation of molecular weights from the sedimen- tatlon'dlffu810n data 0 o o e o o e o o o o o o INTRODUCTION The proteose-peptone fraction of milk is a group of heat stable, minor proteins remaining in the supernatant after skimmilk has been subjected to heat treatment (95° C for 30 minutes) and subsequent adjustment to pH h.6. The protein fraction occurs in low concentration compared with the principle milk proteins such as casein or B-lactoglob- ulin.’ Classically. proteose-peptone is referred to as a secondary or derived protein formed by hydrolysis of pro- tein. whether heating of skimmilk results in the hydrolysis of peptide bonds of the native milk proteins is not well established. The prevalent concept of the effect of heat on protein concerns the rearrangement of the tertiary structure of the protein molecule, rather than cleavage of the peptide bonds. Hence, the term proteose-peptone, as described in this study, is used to designate a particular milk protein fraction and is not intended to imply that it is a group of low molecular-weight, breakdown products of milk proteins resulting from heat treatment. Previous studies indicated that proteose-peptone is a group of heterogeneous proteins. In order to best study the proteose-peptone components, a reliable analytical technique needs to be developed for detecting the individ- ual components. ‘Acrylamide gel electrophoresis and starch- urea gel electrophoresis were found to be quite satisfactory for this purpose. For my study, I chose to work with the slowest moving component of proteose-peptone in gel electrophoresis. This component may be analogous with the component 3 observed in free-boundary electrophoretic pattern of the proteose-pep- tone fraction. In later discussions, component 3 is referred to as the slow-moving component of the proteose-peptone group. Since it has not been established if component 3 exists in the native skimmilk, attempts were made to isolate component 3 from heated and unheated skimmilk. In view of the above discussion, the present study seeks to work on the following objectives: 1) to prepare workable quantities of component 3, both from heated and unheated skimmilk; 2) to obtain chemical compositional data of both; and 3) to obtain physical parameters such as molecu- lar weight, sedimentation Coefficient, diffusion coefficient and others. For the purpose of Organization, the thesis has been divided into two parts: Part I describes the prepara- tion of component 3 while Part II evaluates the physical- chemical parameters of the preparations. REVIEW OF LITERATURE The term proteose-peptone was first designated by Rowland (1938) as the milk protein fraction which was not precipitated by heating skimmilk at 95° C for 30 minutes and‘subsequent acidification at pH n.7, but precipitated by trichloroacetic acid at a concentration of 8%. Rowland referred to this group of proteins as the "secondary" proteins of a proteose-peptone nature which are present. together with the albumins and globulins, in the whey frac- tion of normal cow's milk. He reported a procedure for estimating the proteose-peptone content of milk based on nitrogen determination. The proteose-peptone nitrogen was calculated as the difference in the nitrogen contents between casein-free, non-coagulable heated-sera and that portion of the sera remaining in the supernatant at 85 trichloroacetic acid concentration, i.e., the non-protein substances. He reported that the soluble protein fraction or whey of normal milk was composed of approximately 76% albumin and globulin and 2h% proteose-peptone substances. Aschaffenburg (1946), studying the surface activity of milk proteins, obtained a protein fraction from acid or rennet whey by salting-out the sera obtained after the removal of casein and heat-coagulable proteins with ammonium sulfate at half saturation. He called this protein fraction Sigma proteose because of its pronounced surface activity. A nitrogen analysis of sigma proteose showed that it had a 4 markedly reduced nitrogen content compared with other prin- ciple milk proteins. He first reported the heterogeneity of the fraction when it was shown that the fraction contained three electrophoretic peaks in phOSphate buffer at pH 8.0 in the Tiselius cell. The three components, in decreasing order of mobility, and based on peak area, accounted for 10.5, 82.5 and 7.0%, reSpectively, of the total protein in sigma proteose. The ultracentrifugal data showed that this protein fraction was heterogeneous. Weinstein,uuncan, and Trout, (1951) isolated a pro- tein fraction from heated, rennet whey by a procedure simi- lar to that of Aschaffenburg which they called the "minor- protein" fraction. They indicated from elementary analysis that the minor-protein fraction was different from sigma proteose. The nitrogen content of the minor-protein frac- tion, 10.0%, was low compared with the reported value of 13.95% N for sigma proteose. Their electrophoretic data showed that at least two components were present in the minor-protein fraction. They estimated the isoelectric zone of the major components of the minor-protein fraction at pH 3.7 to 9.”, based on electrophoretic mobilities at various pH values. Larson and Rolleri (1955) made a systematic study of the effect of heat treatment on the electrophoretic mobilities of serum whey proteins. They noted that the unheated whey proteins on free-boundary electrophoresis showed a series of peaks, some barely visible due to the 5 predominance of other peaks. However, with increasing heat treatment, they observed a progressive decrease in the rela- tive peak areas of the heat-denaturable whey proteins and an increase in the peak areas of the heat-stable whey proteins; until at 95° C for 30 minutes, only 3 components appeared in the electrophoretic pattern. By measuring the electro- phoretic mobilities of the components appearing in the electrophoretic patterns of both heated and unheated whey, they accounted for a total of eight peaks, designated as component 1 through 8, in an increasing order of mobility. The three heat-stable components correSponded to component 3, 5 and 8 in the electrophoretic pattern, with component 5 constituting the major fraction. Components 3, 5 and 8, by nature of the preparation, are similar to the Rowland's proteose-peptone fraction. In the electrophoretic pattern of unheated whey, component 3 was obscured by the immune globulins (component 1 and 2); component 5 was partially obscured and appeared as a small peak or asymmetry on the side of R-lactoglobulin peak (component 6); component 8 was also partially obscured by B-lactoglobulin and serum albumin (component 7). The calculated electrophoretic mobilities of Component 3, 5 and 8 in veronal buffer (ion strength = 0.1: PH 8.6) were -3.0, -4.6 and -7.9 x 10.5 cm2 volt.1 sec'l, reSpectively. Since proteose-peptone components appeared in the electrophoretic pattern of unheated whey, Larson and ROlleri (1955) suggested that the proteose-peptone fraction ‘ was present in unheated skimmilk. 6 Jenness (1959) obtained a protein fraction rich in whey component 5 from unheated skimmilk. Casein and pre- sumably the proteose-peptone fractions were salted-out of skimmilk saturated with sodium chloride. The enriched component 5 obtained with this procedure showed a major peak with an electrophoretic mobility of -#.5 x 10"5 cm2 -1 at pH 8.6 in veronal buffer, which agreed volt"1 sec well with the electrophoretic mobility of component 5 of the proteose-peptone fraction. It is interesting to note that in Jenness' procedure, the proteose-peptone components were obtained from fractions associated with micellar casein, while previously, the proteose-peptone components were shown to be present in the whey protein fraction. Thompson and Brunner (1961) characterized several minor protein fractions of bovine milk, following previ- ously known procedures for preparing the fractions. These included the proteose-peptone fraction of Rowland's, Aschaffenburg's sigma proteose, the minor protein fraction of Neinstein, Jenness' milk component 5 concentrate, and the soluble membrane-protein. They showed that these frac- tions were characteristically low in nitrogen (10-1u%), high in ash (3-7%) and phOSphorus (0.6-1.5%), and contained hexose sugars. Free-boundary electrophoretic patterns and sedimentation constants for the above fractions were mea- sured. Their data showed that the four minor-protein frac- tions prepared from skimmilk were heterogeneous systems and 'bhat a major electrophoretic and ultracentrifugal peak 7 appeared to be a common component in these fractions. Whether the different procedures for preparing the minor- protein fractions yielded one or more identical components has not been elucilated. Thus, from the above discussions, it is apparent that the proteose-peptone fraction is a group of heterogeneous proteins, composed essentially of three major components. However, to date, no individual components of the proteose- peptone fraction have been isolated and characterized. Also, since proteose-peptone has been reported to be obtained from the casein system (Jenness, 1959), as well as from whey, it would seem appropriate, in studying the distribution of proteose-peptone components, particularly component 3, to investigate their occurrence both in the casein micelle and the whey. The presence of carbohydrate in protein has been recognized for years (Gottschalk, 1966). The association of carbohydrate with protein may be weak, as in the form of diSSOCiable ion binding of mucopolysaccharides to protein, or it may be tightly bound in the form of a covalent link- age. A glyCOprotein is defined as a protein-carbohydrate complex in which the carbohydrate is covalently bonded to the polypeptide and can only be dissociated by12) decreased the hexose content slightly (Figure 3). That the hexose contents of the glycoprotein exposed to buffers of various pH values remained essentially unchanged does not preclude the possibility that the gly- coprotein might undergo physical alterations in molecular association during such exposures. Hence, the various buffer-eXposed component 3 samples were run on acrylamide gels at pH 9.6 to check their electrophoretic characteris- tics. Again, the gel patterns of the treated, purified component 3 samples remained the same (Figure 9). Thus, it can be assumed that exposure to the buffer systems used in preparative acrylamide gel electrophoresis, i.e., Tris- citrate and borate buffer at pH 8.6, for the duration of the electrophoretic run at temperature less than 10° C, did not result in drastic cleavage of carbohydrate from the glycoprotein. Isolation of Component 3 from the Engiched Fractions Enriched component 3 samples were applied on the preparative acrylamide gels for the isolation of the elec- trOphoretically homogeneous component. A typical electro- 29 phoretogram from the two strips of the preparative gel is shown in Figure 11. The resolution of enriched component 3 in the preparative acrylamide gel was quite satisfactory and comparable to the resolution obtained in analytical gel elec- trophoresis. Also, component 3 was well separated from the other proteose-peptone components and, hence, was conven- iently removed from the gel. Component 3 was extracted from the excised gels by the process of equilibrium-diffusion, using several changes of fresh, deionized water. The excised gels was macerated into a slurry to provide greater efficiency in extraction. The extracted component 3 contained monomeric Species of the acrylamide gelling agents, which must be removed from the sample. The protein content of the extracted component 3 increased with subsequent removal of acrylamide by the salting-out technique (see Figure 4). Here, the "total protein" content was measured by the absorbence values obtained with the Folin-Ciocalteu reaction. Component 3 was essentially free of acrylamide after the second pre- cipitation (Figure 4). Hence, three time precipitations were adopted for the removal of acrylamide. The procedure d1d.not preclude the possibility that small amount of acryl- amide may be tightly complexed with the protein and cannot be removed by further precipitation. The gel electrophoretic patterns of the isolated component 3, together with their enriched fractions, both from heated and unheated skimmilk, are shown in Figure 12A. The starch-urea gel electrophoretic 30 patterns of the isolated component 3 are shown in Figure 12B. The incorporation of urea in the gel increased the mobility of component 3. The isolated component 3 was essentially electrophoretically homogeneous and free of other proteose- peptone components. Distribution of Component 3 in Casein and Whey Proteose-peptone components were obtained from casein and whey by ultracentrifugation and isoelectric precipita- tion. The term proteose-peptone is applied to the protein fraction that remains in the supernatant after heat treat- ment and subsequent acid precipitation at pH 4.6. The gel electrophoretic patterns of proteose-peptone obtained from 1) ultracentrifuged "whey" supernatant; 2) ultracentrifuged casein micelle: 3) whey after_isoelectric precipitation of skimmilk at pH 4.6 and 4) isoelectric (pH 4.6) precipitated casein, are shown in Figure 13. It is interesting to note that component 3 is present in the proteose-peptone fraction from whey, but is conSpicuously absent in the proteose- peptone fraction from casein. This is rather interesting from the conjecture that if component 3 is associated with \12 5.0 0.393 7.7 0.553 1 1 1 34 TABLE 2 Folin-Ciocalteu colorimetric values for "total protein" content to determine the number of precipitation steps required for effective removal of acrylamide from protein extract (see Figure 4) Samples Absorbance (at 525 mu) Extracted component 3* (contains acrylamide) 0.292 ist Precipitate 0.648 2nd Precipitate 0.721 3rd Precipitate 0.721 4th Precipitate 0.721 *Concentration of sample = 0.5 mg/ml 35 SK II‘EI-ZILK Heat at 100° c for 30 min Cool to room temperature Adjust to pH 4.6 with 1 N HCl LCentrifuge (1,000 x G; 10 min) i SUPERNATANT (Proteose-peptone) PHECIPI1A‘E At pH 4. 6 Add solid (143114).) to 35% saturation (Casein plus denatured whey proteins; dis- Allow to stand for 30 min card) Centrifuge (1,000 x G; 20 min) . T SUPERHATANT Add (NHu)ZSO to 55% saturation Allow to stand for 30 min Centrifuge (1,000 x G; 20 min) PBECIPITATE (Enriched component 5) Redissolve in water Dialyze Freeze-dry SUPERfiATAUT Add (IH “)280 to 80p satura ion Allow to stand for 30 min Centrifuge (1,000 x G; 20 min) PRECILITATE (Enriched component 3) Hedissolve in water Dialyze Freeze-dry SULEBNATAHT (Discard) PBECIPITACE (Enriched component 8) Redissolve in water Dialyze Freeze-dry Figure 1. Procedure followed for obtaining enriched compo- nent 3 from heated skimmilk. 36 Acidify with 1 N HCl to DB 4.6 Filter . . . I- - . ‘31 iii: 1 CASEIN (Discard) Adjust pH to 6.5 with 1 N NaOH Add (NH “)2804 to 505 saturation Centrifuge (1, 000 x G; 20 min) 1' :15 ’3 IP I‘; SUPEIMATANT (Crude globulin fraction) (8 , crude albumin rAction; discard) Redissolve at 33 protein conc. Adjust to pH 4. 6 Add (NHu ) son to 25p saturat on Centrifuge (1, 000 x G; 30 min) SUPERKATANT PHECILITATE (P1, discard) Adjust to pH 6.0 Add (NH ) sou to 405 saturat on Hold at 37° C for 30 min Centrifuge (1,000 x G 20 min) SUPJREATAKT PHECIPITATE (P2, discard) Add (NI ) son to 45m satur t onu Hold at 37° C for 1 hr Centrifuge (1,000 x G; 20 min) (Continued on Page 37) SUPERNATANT PBECIPITATE (Discard) (P3, enriched component 3) Redissolve in water Dialyze Freeze-dry Figure 2. Procedure followed for obtaining enriched com- ponent 3 from unheated skimmilk. Absorbance (540 mu) 1.0 *-«---~ —~ ..._._1..,._... - 1 11 1 11 - p I I 0.8 .’/ ; P éy/Cé : //)d 0.6 _ , . 20 i Buffers A, ,/ i o/ l 0.4 #— [CA /‘7 0.1 N NaOH 0/ 0.2 i i I l J -.Jw_1_l1.- l1. 1 2 4 6 8 10 Edgme3. Protein Concentration (mg/m1) Colorimetric values (Orcinol-Sulfuric acid method) for hexose contents or purified component 3 eXposed to buffers of various pH values. Legend: E] , citrate phOSphate pH 4.6; [S . citrate phOSphate pH 7.0; V7 , deionized water; 0 , Tris-citrate pH 8.6; 8 , borate pH 8.6; A , 0.1 N NaOH pH 12. Absorbance (525 mu) 39 0.8 n A V U 0.6 0.4 0.25q J J L l o 1 2 3 a Number of Precipitation Figure 4. Folin-Ciocalteu colorimetric values for "total protein" content to determine the number of precipitation steps required for effective removal of acrylamide from protein extract. no SKIhMILK Ultracentrifugation (48,000 rpm: 90 min Beckman Type 50 rotor) CASEIN PELLET "WHEY" SUPERNATANT Hedissolve in water Heat at 1000 C for to original volume 30 min Heat at 1000 C for Cool to room tem- 30 min perature Cool to room tempera- Adjust to pH 4.6 ture Centrifuge (1,000 x G; Adjust to pH 4.6 - 20 min) Centrifuge (1,000 x G; 20 min) PBECIPITATE SUPERNATANT PRECIPITATE SUPERNATAKT (Discard) (Proteose-peptone (Discard) (Proteose-peptone components) components) Adjust to pH 6.5 Adjust to Dialyze pH 6.5 Freeze-dry Dialyze Freeze-dry Figure 5. Procedure followed for obtaining proteose-peptone components from casein and whey by ultracentrifu- gation. 41 SKILMILK Adjust to pH 4.6 with 1 N HCl Centrifuge (1,000 x G; 15 min) WHEY PHECIPITATE (Casein) Adjust to pH 6.7 Hedissolve in water to Heat at 1000 C for original volume with 30 min 1 N NaOH Cool to room tempera- Adjust to pH 4.6 ture Centrifuge (1,000 x G; Adjust to pH 4.6 20 min) Centrifuge (1,000 x G; 20 min) PRECILITATE SUPEHNATANT PRECIPITATE SUPERNATANT (Discard) (Proteose-peptone (Casein) (Discard) components) Hedissolve in water Adjust to to original volume pH 6.5 with 1 N NaOH Dialyze = Adjust to pH 6.7 Freeze-dry Heat at 100° c for 30 min Cool to room temperature Adjust to pH 4.6 Centrifuge (1,000 x G; 20 min) PHECIPITATE SUPERNATANT (Discard) (Proteose-peptone components) Adjust to pH 6.5 Dialyze Freeze-dry Figure 6. Procedure followed for obtaining proteose-peptone components from casein and whey by isoelectric precipitation at pH 4.6. .' ’1 Figure 7. L', Acrylamide gel electrophoretic patterns of proteose- peptones obtained from the preparative scheme (Figure 1): '1) classical proteose-peptone (Appendix, Part1), 2) enriched component 5, 3) enriched com- ponent 3, 4) enriched component 8. Discontinuous buffer systems (Appendix, Part I). :m: :m: a 5-2.0 a E o o 2w: 1"18111‘3 63' o 44 Acrylamide gel electrophoretic patterns of proteose- peptone and various whey protein fractions as designated in the isolation scheme, Figure 2. Discontinuous buffer system (Appendix, Part I). Colume A: 1) P3 fraction, 2) P fraction, 3) P1 fraction, 4) S fraction, 5) prgteose-peptone. Column 3: 1) fraction following heat treatment, 2) P fraction prior to heat treatment. 3) roteose- pept ne. Column C: 1) proteose-peptone, 2) en- riched component 3 fraction from the preparative procedure as outlined in Figure 1, 3) enriched com- ponent 3 fraction from the preparative procedure as outlined in Figure 2, 45 .: phdm .NadSoaai Hopmhm Homage. naoasdpsooman .sogaaom moaz z H.o an .36 m3 Novas pouasoaod A .35 m3 wagon Am .36 m3 openpdoludfia AN .Sémav octagon 13.933 A." ”mason N.“ you ma 26.73», mo 95.33 on domoauo 218381393 condos: m psosoaaoo doe—3.96 .wo mahoppa caponosaonuooac How ovdaddhngw .m onswdm V;- \ % _ m . m N .sodpomnm cosoango map scum m psosoaaoo mo sodpwfloma on» ad poms HHmo oapmaoaaoapooao mbdpwndAona was .OH mammam .jmu m> :53:me 48 .How obapmamamaa on» no maaapm mean 03» Scam m psosoaaoo doamdmsa no announce oapmaosaoapomam How oedemaaaod .aa masmaa Figure 12. 49 '- Acrylamide gel electrophoretic patterns of com- ponent 3 isolated from the preparative-scale acrylamide gel electrophoresis. Colume A. Acrylamide gel electrophoretic patterns of: 1) isolated component 3 (unheated preparation) obtained from the preparative gel, 2) enriched component 3 (unheated reparation) applied to the preparative gel, 3 isolated component 3 (heated pre aration) obtained from the prepara- tive gel, 4) enriched component 3 (heated preparation) applied to the preparative gel, 5) proteose-peptone. Discontinuous buffer sys- tem (Appendix, Part I). Colume B. Starch-urea gel electrophoretic patters of: 1) isolated component 3 (heated preparation), 2) isolated component 3 (unheated preparation). Discontin- uous buffer system (Appendix, Part I0. 50 51 .AH phdm .Navzoaahenol-sulfuric acid method was more sensitive than 62 the orcinol-sulfuric acid method, in addition to being simple and reproducible. Hence, it was adopted for the hexose analyses of the protein. Protein was dissolved in deionized water to a concen- tration of approximately one mg per ml. Two ml aliquot of the sample solution was pipetted into a test tube, to which, was added 0.05 ml of a 80% redistilled phenol solution. Then, 5 ml of concentrated sulfuric acid was added rapidly, the stream of liquid was directed against the liquid sur- face rather than against the side of the test tube in order to obtain good mixing. The tubes were shaken and allowed to stand at room temperature for 10 minutes. Then, they were placed inma water bath at 25° C for 20 minutes. The per cent transmission of the characteristic yellow orange color was measured at 490 mu, using a Beckman DK-2 Spectro- photometer. Two standard curves were prepared from commer- cially available galactose and mannose. Fucose Fucose, a methylpentose, is a normal constituent of the tflood-group substances and is present in many glycopro- teied‘.jFucose has been reported to be present in the proteose- Peptone fraction of boVine milk (Thompson and Brunner, 1959). A colorimetric methodfor fucose determination involves heat- 1r1C3'the sample with sulfuric acid, followed by addition of Cysteine hydrochloride to give a green-yellow color (w'enzler, 1955) . The optical densities are read at two wavelengths and 63 the difference between these values is compared with that given by standard fuCOSe solution. Hexose, hexosamine and pentose do not interfere with the reaction. Protein (5 to 10 mg) was dissolved in 10 ml of deion- ized water. A fucose standard solution, containing approxi- mately 20 mg per ml, was prepared. A sulfuric acid-water mixture was made up of six volumes of concentrated sulfuric (acid and one volume of water. One milliliter aliquots of the sample solutions were pipetted into test tubes. To these tubes (and to one ml of water for blank and one ml of the fucose standard), were added 4.5 ml of ice cold H2304 - H20 solution. The solutions were mixed while maintained in an ice bath. The solutions were heated for exactly three minutes in a boiling water bath and cooled in tap water. Cysteine-hydrochloride solution (0.1 ml of a 3% w/v solu- tion) was added and mixed immediately. The cysteine rea- gent was omitted from one of the samples to correct for non-specific color development. The solutions were allowed to stand at room temperature for 60 minutes and the per cent transmission was read at 396 and 430 mg, with a Beckman DK-Z spectrophotometer. Hexosamine The analysis of hexosamine in glycoprotein involves, firstly, the hydrolysis of hexosamine from the glycoprotein, followed by the determination of hexosamine in the hydro- lysate. The usual hydrolytic conditions employed in the 64 hexose analysis (1 to 2 N HCl at 100° c for 4 to 5 hours) might result in incomplete liberation of hexosamine. The hydrolytic condition employed in the amino acid analysis (6 N HCl at 110° C for 20 hours) would result in appreci- able destruction of hexosamine. The hydrolytic condition usually employed for hexosamine determination, i.e., 4 N HCl at 100° C for 4 to 6 hours, represents a compromise between maximum release of the amino sugars with minimum destruction. A common procedure for the determination of hexosamine is the method developed by Elson and Morgan, (1933), whereby acetylacetone is allowed to react with the amino sugar in a hot, mildly alkaline solution. A mixture of pyrroles is obtained, giving a pink color with Ehrich reagent (p-dimethylaminobenzaldehyde). Several modifications of the Elson and Morgan method have been reported (Rondle and Morgan, 1955; Kraan and Muir, 1957; Exley, 1957). One of these, the Cessi method (Cessi and Piliego, i960) involves the steam distillation into Ehrlich's reagent of 2-methylpyrrole, a volatile compound that is produced among the mixture of pyrroles. The Cessi method was reported to be highly reproducible (Johansen gt, al.. 1960) and was the method employed for the hexo- samine analysis. The acetylacetone reagent was prepared by dissolv- ing one ml of colorless, redistilled acetylacetone (boil- ing point, 138 to 140° C) in 100 ml of 0.5 N sodium carbonate-sodium bicarbonate buffer, containing 0.1 L 65 sodium chloride. The pH of the buffer should be close to 9.8. Ehrich reagent was prepared by dissolving 80 mg of p-dimethylaminobenzaldehyde in 100 ml of absolute ethanol containing 3.5 ml of concentrated hydrochloric acid. Hydrolysis proceeded as follows: ,protein (5 to 10 mg) was dissolved in 5 ml of 4 N HCl and hydrolyzed at 100° c for 6 hours under an atmOSphere of nitrogen. the hydrolysate was dried in vacuum over NaOH in a dessicator maintained at room temperature. The dried hydrolysate was dissolved in 10 ml of water, a two-milliliter aliquot was pipetted into a small micro-Kjeldahl distillation flask, to which, was added 5.5 ml of acetylacetone reagent (pH 9.8). The solution was heated in a boiling water bath for 20 minutes. After cooling in tap water, the digestion flask was con- nected to a steam distillation apparatus. Heating was done with a microburner. Portions (2 ml) were distilled into 10 ml volumetric flasks containing 8 ml of the Ehrich reagent. Per cent transmissions were determined 30 minutes later at 545 mm, with Beckman DK-2 spectro- photometer. A standard curve was prepared from.commer- cially available glucosamine-HCl, which was treated with the acetylacetone reagent as described above. Sialic Acid Sialic acids comprise the various N-acetylated and N-acylated-O-acetylated neuraminic acids widely distributed in animals in predominantly bound forms. Among the carbo- 66 hydrate moities of glycoprotein, sialic acid is the most labile to acid hydrolysis. This is related to the struc- ture of sialic acid which resembles a deoxy-sugar, the glycosides of which have been reported to be hydrolyzed much more readily than other glucose derivatives (Overend §§,'gl.. 1962). The sialic acid appears to occupy a non- reducing terminal position in the heterosaccharides chain and is linked ketosically either to hexose or hexosamine (Kuhn, 1960). In the determination of total sialic acid, the uSual procedure is to perform the hydrolysis first to release sialic acid from its bound form. The condition employed is a mild acid treatment in 0.1 N 32304 at 80° c for 30 minutes. The free sialic acid can be determined by ' several colorimetric procedures, among which the thiobar- bituric acid method (Warren, 1959) is the most sensitive and reproducible. The method is based on the periodate oxidation of sialic acid to form cleavage products which react with thiobarbituric acid to give a color compound with an absgrption maximum at 549 mu. Protein (5 to 10 mg) was dissolved in 10 ml of 0.1 N H280“ solution and hydrolyzed at 800 C in a water bath for 30 minutes. A four-tenths m1 aliquot was pipetted into a test tube, to which was added 0.1 ml of sodium periodate solution (0.2 M sodium meta-periodate in 9 M phosphoric acid). The tubes were shaken and allowed to stand at room temPerature‘for 20 minutes. One milliliter of sodium arsenite solution (10% sodium arsenite in a solution of 67 0.5 M sodium sulfate-0.1 N H2304) was added and the tubes shaken until the yellow-brown color disappeared. Three milliliters of thiobarbituric acid solution (0.6% in 0.5 N socium sulfate) was added. The tubes were shaken, capped with marbles, and heated in a vigorously boiling water bath for 15 minutes. The tubes were removed and placed in cold water for 5 minutes, followed by the addition of 4.3 m1 of cyclohexanone, which was used for the extraction of the chromophore. The tubes were shaken and the contents were transferred to conically shaped tubes and centrifuged for 3 minutes in a clinical centrifuge. The clear, upper cyclohexanone phase was red and more intense than in the aqueous phase. Per cent transmission of the organic phase was measured at 549 mu with a Beckman DK-Z Spectrophotometer. .A.standard concentration curve was prepared from commer- cially available, synthetic N-acetylneuraminic acid. Paper Chromatographic Identification of Carbohydrate The colorimetric methods for hexose and hexosamine dc> not differentiate between the types of hexose and hexo- samine in glycoproteins. Hence, a qualitative analysis of the; carbohydrate moities was required. Several methods are avelilable for the identification of sugars in biological sut>stances. These include paper chromatography, thin-layer Chrxamatography, gas chromatography of sugar derivatives, and, others. The carbohydrate was hydrolyzed from the sample Wit?! 1-2 N HCl. The acid and other charged groups, such as 68 amino acids or peptides that may be present in the hydrolysate, should be removed before the sample is applied on the chromato- graphic paper. This operation can be accomplished in several ways, such as ion exchange chromatography, repeated lyophiliza- tion (in case of HCl). extraction with pyridine or a combina- tion. Paper chromatography was adopted for the tentative identification of hexose and hexosamine in component 3. A mix- ture of known sugars was chromatographed as a standard. Purified component 3 (approximately 50 mg) was dissolved in 5 ml of 2 N HCl and hydrolyzed in a sealed tube at 100° c for 6 hours. The hydrolysate was dried by evaporation under reduced pressure in a warm water bath. The dried hydrolysate 'was dissolved in 5 ml of water and passed through a Dowex 50 8x (B? form) column (2.2 x 30 cm) coupled with an Amberite 4B-(OH- form) column (2.2 x 30 cm). The effluent (300 ml) was evapor- zrbed to dryness under reduced pressure. The dried material was «attracted with 5 ml of pyridine (redistilled) on a steam bath for 5 minutes. Pyridine was removed by evaporation under reduced pressure at temperature below 40° C. The extracted mngar'residue was dissolved in a minimum amount of 10% propanol, and. applied to the chromatographic paper (Whatman no. 1). A starrdard mixture of known sugars was spotted alongside the samp11e. The relative positions of the known sugars in the mix- ture: were ascertained by spottings of individual sugars in the Chrornatogram. The descending chromatogram was run for 18 hours, at r<>om.temperature, using a solvent mixture made up of butanol- PYridxtne-water (6:4:3, v/v). The chromatogram was dried at 1000 C 69 _ for 10 minutes and developed at 60° C in a moist atmOSphere with 2% triphenyltetrazolium chloride in an equal volume of 1 N NaOH. Ph sical Methods Free-Boundary Electrophoresis This technique is used to determine the ionic mobil- ity of a purified protein preparation and to estimate its isoelectric pH value. Electrophoretic mobilities are cal- culated from measurements made from the position of initial boundary on the descending and ascending patterns, as fol- lows: dAk tIHm H: where u is the electrophoretic mobility in cm2 volt-1 sec-1, d the distance measured from the initial boundary in cm, A the cross-sectional area of the electrophoretic cell in cm2, k the cOnductivity cell constant, t the time in seconds, I the current in amperes, R the resistance of the buffer in ohms, and m the magnification of the optical system. The protein solution should be clear in order to obtain a good photographic pattern. Also, the protein solution should be ciialyzed against the buffer until ionic equilibrium is eattained. For estimation of isoelectric point of protein, 21 series of electrophoretic runs with buffer pH ranging from basic to acidic (so that the net charge on protein <1hanges from negative to positive, reSpectively) are 70 ‘ employed. The isoelectric point of the protein is estimated from a plot of ionic mobility against pH. The preparations of the buffers used in free-boundary electrophoretic runs are shown in the Appendix, Part II. Ultracentrifugation Sedimentation-Velocity; The sedimentation-velocity method is used for the determination of the sedimentation coefficient of the molecule and for providing information about the purity of the material under investigation. The sedimentation coefficient is defined as the velocity of the sedimenting molecule per unit centrifugal field. The ultracentrifuge is operated at top Speed, and the movement of the boundary across the cell is recorded in the photo- graphs which are taken at periodic intervals. Sedimenta- tion coefficient is calculated from the following equation, 2.303 x 8212—108? where S is the sedimentation coefficient in sec, x the dis- tance of the boundary in cm from the axis of rotation, t the time in secs and w the angular velocity in radians per sec. Generally, the sedimentation coefficient is eXpressed in units of 1 x 10'13 sec and the unit 1 x 10'13 sec has been termed is, where S is the Svedberg. EXperimentally, a plot of log x against t gives essentially a straight line, the slape of which is used to calculate the sedimentation coef- ficient. For many proteins, the sedimentation coefficient 71 is dependent on concentration (Schachman, 1959). Determina- tions are made at different concentrations and the sedimenta— tion coefficient is estimated at infinite dilution. Sedimentation-Equilibriumi Sedimentation-equilibrium is attained when the material migrating across a given sur- face in a centrifugal direction is balanced by the tranSport centripetally due to diffusion. Sedimentation-equilibrium is used for calculating the molecular weight of a protein. The classical sedimentation-diffusion equilibrium requires a long running period for attainment of equilibrium (VanHolde and Baldwin, 1958). Archibald (1947) has shown that molecu- lar weights can be calculated from data obtained during the early stages of a centrifugal run. He pointed out that the solute does not leave the centrifuge cell either at the meniscus or the bottom of the cell and therefore the condi- tions for equilibrium are fulfilled at these two locations in the cells at all times of the run. Thejnrchibald proce- dure, generally known as the approach-to-equilibrium method, has been frequently applied for molecular weight study (Erlander and Foster, 1959). The method-requires knowledge of the concentration of solute at the bottom and meniscus of the cell. It should be noted that determination of molecular weight by this method should be made over a range of protein concentrations, since calculation based on one concentration may be unsound unless the protein solution is truly monodispersed. In the case of a polydiSperse system, 72 the apparent weight-average molecular weight is dependent on concentration. The apparent weight-average molecular weight is plotted against concentration and the h:,app at infinite dilution is calculated by extrapolation to zero concentra- tion. Where the apparent weight-average molecular weight shows dependence on protein concentration, attempts are made to determine molecular weight in the presence of a dis- sociating agent, such as 5 M guanidine-HCl, in the hape of obtaining the molecular weight of the light component that. is nearly independent or shows a less degree of dependence on concentration. Sedimentation-velocity and sedimentation-equilibrium studies were performed in a Spinco Model E, analytical untra- centrifuge equipped with an RTIC temperature-control unit and a phase plate as a schlieren diaphragm. A synthetic- boundary cell was used in all sedimentation-velocity runs. Equilibrium studies were performed in the double-sector cell. Centerpieces were of the filled-Epon type.. A false bottom of FC-u3 fléiocarbon oil was employed in the short- column equilibrium eXperiments. The sedimentation-velocity studies were performed at 200 C with rotor speeds of 59,730 r.p.t. The photographic plates were read with a Nikon. microcomparator capable of measuring to less than 0.002 mm. A sample calculation of the equilibrium molecular weight by the sedimentation equilibrium method is shown in the Appendix, Part II. 73 Diffusion Coefficignt: The diffusion coefficient is the proportionality factor relating the rate of transfer of material across unit cross section to the rate of concentra- tion with reSpect to the distance (the concentration gradi- ent) at the given cross-section. The diffusion coefficient of a protein is a physical parameter relating to the size and shape of the molecule. The diffusion coefficient can be obtained employing the schlieren optics in Tiselius free- boundary electrophoretic cell or the Beckman Model E ultra- centrifuge. In the schlieren Optics, concentration gradient is proportional to the peak height and area. Diffusion coefficient can be calculated from measurements of peak height and area at various time intervals, according to the following formula, mzA2 1+1TtH2 where D is the diffusion coefficient in cmZ/sec, A is the area in cmz, H is the peak height in cm, t the elapsed time in sec and m, the magnification of the optics. With Tiselius free-boundary electrophoretic cell, the area is measured by weighing the enlarged photographic patterns. With Beckman Model E ultracentrifuge, the area is measured from the photographic plates, using a Nikon microcomparator.l The quantity mzAz/LLTIH2 is plotted against time. The dif- fusion coefficient is obtained from the slope of the line. The diffusion coefficient of a protein often depends on protein concentration (Greenberg, 1951). Hence, diffusion 7Q runs are made at various protein concentrations. In the following diffusion runs, a Tiselius cell was used for the protein in veronal buffer, pH 8.6, ion strength = 0.1 and a Beckman Model B ultrancentrifuge was used for the protein in veronal-5 H guanidine hydrochloride, since large quantity of guanidine hydrochloride was not available at the time for runs in the Tiselius cell. RESULTS AND DISCUSSIONS Chemical Composition The amino acid compositions of component 3 from heated and unheated skimmilk are shown in-Table 3. The analyses were reported as g residue/100 g protein and as number of residues/1000 residues. The weight percentages of the amino acid residues were based on a nitrogen content of 13.1% and 13.2% for component 3 from heated and unheated skimmilk, respectively, as determined by micro-Kjeldahl nitrogen deter- mination. The second method of expression, i.e., number of amino acid residues/1000 total residues, was used for compar- ing the similarity of the protein isolated from heated and unheated skimmilk. This method of presentation relates the proportions of amino acid residues with reSpect to one another, hence, is not affected by experimental errors such as weighing or loéés during transfers. A summation of the residue weights of the amino acids, together with the values for hexose, hexosamine, sialic acid and phoSphorus, accounted for approximately 95% of the protein. The protein portion constituted about 80% by weight of the glyc0protein, the remaining portion was essentially carbohy- drate. Independent analyses on the amino acids tryptophan and cysteine indicated that component 3 contained negligible or trace amounts of tryptophan and cysteine. Analytical data obtained with the Beckman Model 120C amino acid analyzer revealed that component 3 was low in the aromatic acids 75 76 tyrosine and phenylalanine: low in the sulfur-containing amino acids (no cystine and low methionine); and high in glutamic acid, lysine and leucine. Two small unidentified peaks (2% by weight of total) appeared in the chromatograms from both basic and neutral columns. The chromatogram of the 20 hour hydrolysate showed qualitative evidence of glu- cosamine and galactosamine, the glucosamine being in higher concentration than the galactosamine. The amino acid compositions, in number of residues per 1000 total residues, of component 3 from heated and unheated skimmilk, are presented in the form of the amino acid profiles as shown in Figure 1#. These profiles matched surprisingly close to one another, hence their amino acid compositions were very similar. This rendered strong evidence that component 3 was present as a native glycopro- tein in milk and that its amino acid composition was essen- tially unaltered by the heat treatment employed in its prepa- ration. Elementary analyses of component 3 from heated and unheated skimmilk are shown in Table 4. Again, their nitro- gen and phoSphorus contents were similar. The nitrogen con- tent of 13.1% for component 3 was low compared with the nitrogen value reported for proteose-peptone, i.e., (13.7 to 13.9%) by Thompson and Brunner (1961). The phOSphorus content of component 3, 0.5% was also low compared with their value of 1.15 P. Elementary analyses of the other proteose-peptone components, i.e., component 5 and 8 (Kolar, 77 Ph. D. Thesis, 1967), indicated that these components con- tained higher concentrations of P than component 3. A sul- fur analysis, performed by the Spang Analytical Laboratories, identified 0.59% S for component 3. This value is higher than can be accounted for from methionine sulfur. The amino acid composition of component 3 indicated that it was an acidic protein, i.e., the sum of glutamic and aSpartic acid residues was greater than the sum of lysine, histidine and arginine residues. The-low isoelec- tric point, i.e., pH 3.7. estimated from free-boundary electrophoresis studies supported this conclusion. Compar- ing the chemical composition of component 3 with other minor protein fractions, (i.e., Whitney, 1958; Thompson and Brunner, 1962), component 3 had a lower nitrogen content and contained a sizeable amount of carbohydrate, while most of the minor protein fractions contained much lower concen- trations of carbohydrate. The amino acid composition of component 3 was characterized by its low aromatic amino acid content compared with other known milk proteins. Recently, a phOSphoglchprotein from bovine milk whose chemical composition and ultracentrifugal prOperties cor- responded to the major component of the proteose-peptone fraction was reported (Bezkorovainy, 1965). Its amino acid composition showed high glutamic acid, aSpartic acid and isoleucine contents. It contained 9.5% carbohydrate and had a sedimentation constant of 0.8 at pH 7.0 at in con- centration. Although the amino acid composition, carbohydrate 73 content, and ultracentrifugal properties of the phOSphogly- coprotein differ from that of component 3 prepared for this study, it is conceivable that other proteose-peptone compo- nents, in their predominant forms, or in varying associa- tions with one another, might give a molecular Species whose chemical and physical properties were similar to the phoSphoglycoprotein reported. An acrylamide gel electro- phoretic run of this phosphoglycoprotein, and compared with various proteose-peptone components, would reveal if similar- ities exist among these fractions. The carbohydrate contents of component 3 from heated and unheated skimmilk are shown in Table 5. The standard curves for the carbohydrate analyses are shown in the Appendix, Part II. Component 3 from unheated skimmilk possessed a higher hexosamine and lower hexose content than component 3 from heated Skimmilk. Possibly, a slight degree of sugar degradation, such as deamination of the hexosamine, occurred as a result of the heat treatment employed. The sugar content of 17.3% in component 3 was among the highest reported for milk glycoproteins. The caseino-glchpeptide released from k-casein by treatment with rennet, had a sugar content of 28.1% (Alais and Jolle's, 1961). k-Casein was reported to contain 5.0% carbohydrate (Alais and Jolle's, 1961). Conceivably, the action of some proteolytic enzymes, possibly rennin, pepsin and/or others, might release a gly- cOpeptide from component 3 with a considerably higher sugar content. The proteose-peptone fraction was reported to 79 contain 6.8% carbohydrate (Thompson and Brunner, 1959). A comparison of the sugar contents of component 3 with those of the other proteose-peptone components (Kolar, Ph. D. Thesis, 1967) indicated that component 3 had the highest carbohydrate content among the proteose-peptone components. Paper chromatographic identification of the sugar moities in component 3 is shown in Figure 15. The chromatograms were interpreted to indicate the presence of galactosamine, glucosamine, galactose, mannose and fucose as the major carbohydrates in component 3. Minimum molecular weights of component 3 from heated skimmilk were calculated from chemical analyses of known constituents, as Shown in Table 6. An independent deter- mination of molecular weight by ultracentrifugal methods permitted a calculation of the number of residues of each constituent per mole of component 3. Assuming accurate chemical analyses and a reliable molecular weight deter- mination, the number of residues per mole of protein should approach an integral value. The minimum molecular weights calculated from determinations of Sialic acid (as N-acetyl- neuraminic acid), hexosamine, phosphorus, sulfur and tyrosine (the limiting amino acid in component 3) indicated that the above constituents existed in roughly integral ratios of 3:1:2:2:7 in that order. Q .5 0 Physical Properties of Component 3 Electrophoretic Characteristics The ionic mobilities of component 3 from heated skim- milk, calculated from the free-boundary electrophoretic patterns, in buffers ranging from pH 8.6 to 2.0, ion strength = 0.2, are Shown in Table 7. The free-boundary patterns are Shown in Figure 16. The ionic mobility in veronal buffer, pH 8.6 and ion strength = 0.2, is -3.5 cm2 sec"1 volt-1 x 105 from the descending channel. Thompson and Brunner (1961) reported the mobility of component 3 from the electrOphoretic patterns of proteose-peptone, in veronal buffer, pH 8.6 and ion strength = 0.1, to be -2.0 Tiselius units (from descending channel), while Larson (1955), using similar buffer system, reported a value of -3.0 Tiselius units (from descending channel). It is pos- sible that ionic mobility of a protein component would vary Slightly depending on whether it is present singly or in association with other protein components. Also, equi- librium dialysis is important in ionic mobility determina- tion. In all the electrophoretic runs in buffers ranging from pH 8.6 to 2.0, component 3 appeared as a single peak. A plot of ionic mobilities (values from descending patterns) against pH is shown in Figurel7. The mobility decreases to a minimum as the pH of the buffer approaches the isoelectric point of the protein. The isoelectric point, obtained from the intercept of the curve on the pH-axis, was estimated at 1.... 81 pH 3.7. The low isoelectric point of component 3 would fit its description as an acidic glycoprotein. This acidic character agrees with its chemical constitution, which shows an excess of the acidic residues over the basic residues. Ultracentrifugal Characteristics Diffusion Coefficient: The diffusion coefficients of component 3 from heated Skimmilk in veronal and veronal-5 M guanidine hydrochloride buffers, at various protein concen- trations, are Shown in Table 8. The diffusion coefficients were corrected to water at 20° C. A plot of diffusion coef- ficients against protein concentrations is shown in Figure 18. The diffusion coefficients of component 3 increased with increases in protein concentrations. Possibly, molecu- lar aggregation decreased with an increase in protein concen- tration, as would be evident in subsequent sedimentation- equilibrium studies of molecular weights. (The smaller molecular aggregate obtained at increased protein concentra- tion would tend to give a higher diffusion coefficient. A five-to-eight-fold increase in the diffusion coefficient of component 3 was obtained in veronal buffer containing 5 M guanidine hydrochloride, compared with straight veronal buffer. Conceivably, in veronal buffer containing the dissociating agent, a low molecular-weight Species or monomer unit of component 3 existed. The light component would tend to give a higher diffusion coefficient than a large molecular polymer. The diffusion coefficient of 82 component 3, in veronal buffer, at infinite dilution, was 7 estimated at D20 w = 1.80 x 10' cmZ/sec, and in veronal-5 ! M guanidine hydrochloride, at infinite dilution, was esti- mated at D20 w = 11.5 x 10'? cmZ/Sec. O Sedimentation Coefficient: The sedimentation coef- ficients of component 3 from heated skimmilk in veronal and veronal-5 M guanidine hydrochloride, at various protein concentrations, are Shown in Table 9. A plot of the sedi- mentation coefficients against protein concentrations is shown in Figure 19. The sedimentation coefficient decreased with increases in protein concentrations. The sedimentation coefficient was considerably reduced in the presence of the dissociating agent 5 M guanidine hydrochloride, indicating that the polymer-monomer equilibrium was shifted toward the low molecular-weight Species in a dissociating system. A Single boundary appeared in the sedimentation patterns of component 3 at protein concentrations greater than 5.mg/ml. At dilute concentrations of less than 5 mg/ml, high molecu- lar-weight contaminants, possibly some denatured euglobulin or polymorphic species of component 3, appeared as spikes (negligible areas), in the sedimentation patterns. The sedimentation coefficient, at infinite dilution, in veronal buffer, was estimated at 820’W = h.0 Svedberg, and that at infinite dilution, in veronal-5 M guanidine hydrochloride, was estimated at 820 w = 1.62 Svedberg. 33,3 Sedimentation-Equilibrium Studies of hglecular Weight The equilibrium molecular weight of component 3 from heated skimmilk, in veronal buffer, is dependent on protein concentration as shown in Table 10. A plot of equilibrium molecular weight against protein concentration is shown in Figure 20 and 21. It is interesting to note that the molecu- lar weight decreased with increases in protein concentra- tions. k-Casein, a glycoprotein, also exhibitSSimilar behavior (Swaisgood, 196k). The equilibrium molecular weight of component 3, at infinite dilution, in veronal 'buffer, was estimated at 200,000. This value approximates the calculated molecule weight of 207,000 obtained from sedimentation and diffusion coefficients of component 3, at infinite dilution, in the same veronal buffer (Svedberg equation). Presumably, the high molecular weight of component 3 in veronal buffer is due to polymer formation. To study the molecular weight of the smaller unit or light component, a dissociating agent, 5 h guanidine hydrochloride in veronal buffer, was employed for the purpose of shifting the polymer- monomer equilibirum toward the lower molecular-weight species. The equilibrium molecular weight of component 3 in veronal-5 M guanidine hydrochloride at various protein concentrations is shown in Table 10. The equilibrium molecular weight of component 3 was considerably reduced in the presence of the dissociating agent, indicating that 84 disaggregation of the polymeric species of component 3 occurred. A plot of equilibrium molecular weight of com- ponent 3 against protein concentration in veronal-5 K guanidine hydrochloride is shown in Figure 21. In the dissociating system employed, the equilibrium molecular weight again exhibited dependence on protein concentration, although the degree of dependence of molecular weight on protein concentration was less in the presence of the dis— sociating agent. The protein was not monodispersed in veronal-5 H guanidine hydrochloride buffer as evidenced by an Rz/L ratio of greater than one, the Ez/hw ratio being a w measure of the degree of polydiSpersity (Tanford, 1961). Possibly, other dissociating systems, such as 67$ acetic acid-0.15 h NaCl, anhydrous formic acid, and others, should be employed, which might further reduce the dependence of molecular weight on protein concentration, and thus permit a determination of the molecular weight of the monodis- persed protein. Alternately, the molecular weight of the light com- ponent or small unit of component 3 might be obtained according to Trautman's treatment of approach-to-equilibrium method (Swangood, Ph. D. Thesis, 1963). Here, the sedimen- tation equilibrium runs are conducted at various rotor Speeds and at various protein concentrations. The molecular weight of the small component is calculated from the slope of the plot at rotor Speeds where only the small component leaves the meniscus. 85 The equilibrium molecular weight of component 3, at infinite dilution, in veronal 5 M guanidine hydrochloride is estimated at 00,000 (Figure 21). A minimum molecular weight calculated from the tyrosine determination (the limiting amino acid in component 3) gave a value of approx- imately 22,000. Since “0,000 does not represent the molecular weight of the monodiSpersed protein, it is likely that the molecular weight of the small component or the monodiSpersed protein might lie in the range of 22,000 to h0,000. . SUMKARY TO PART II Component 3 is a whey glycoprotein. Its amino acid composition was characterized by a relatively high content - of glutamic acid, leucine and lysine and a low content of aromatic and sulfur-containing amino acids. Its carbohy- drate content of 17.3% was high compared with other milk glycoproteins. The carbohydrate moieties consisted of galactosamine, glucosamine, galactose, mannose, fucose and sialic acid. Component 3 had an isoelectric point of 3.7, which classified it as an acidic glycoprotein. The ionic mobil- ity in veronal buffer, pH 8.6 and F‘/2 = 0.2, was 3.5 Tiselius unit. The sedimentation coefficient was 820,w = 4.0, at infinite dilution in veronal buffer, pH 8.6 and (72 = 0.1. The diffusion coefficient was 1320’W = 1.8, at infinite dilution, in veronal buffer, pH 8.6 and r"/2 - 0.1. Sedimentation-equilibrium studies indicated that the molecu- lar weight was concentration dependent. The equilibrium molecular weight was estimated at 200,000, at infinite dilution, in veronal buffer, pH 8.6 and r'/2 = 0.1. This agreed.well with a molecular weight of 207,000 obtained from sedimentation-velocity and diffusion runs. In the presence of a dissociating agent, the polymer-monomer equilibrium was shifted toward the low molecular-weight component. The equilibrium molecular weight was estimated at 00,000 in veronal-guanidine hydrochloride. However, even 87 in such dissociating agent, the molecular weight still showed concentration dependence, indicating that the protein was not completely monodiSpersed. A minimum molecular weight estimated from the limiting amino acid gave a value of 22,000. The molecular weight of the monodispersed proteinwls estimated between 22,000 and 40,000. O Q J‘.) TABLE 3 Amino acid composition of component 3 (heated and unheated preparations) Grams Residue/ Number Residueg/ 100 g Protein8 1,000 residues Residue Heated Unheated Heated Unheated Lysine 7.31 7.55 84.65 87.04 Histidine 3.27 3.19 35.33 34.44 Arginine 4.04 4.02 38.42 38.14 Unidentified Peak 1.79 1.85 18.70 19.15 ASpartic Acid 6.47 6.42 83.32 82.50 Threoninec 5.58 5.40 73.02 74.93 serinec 6.26 6.03 96.28 91.89 Glutamic Acid 14.40 14.22 165.91 161.98 Proline 4.79 4.82 73.31 73.57 Glycine ' 1.07 1.15 27.82 29.60 Alanine 2.16 2.16 44.16 45.11 Unidentified Peak 0.27 0.27 4.12 4.16 Valine 2.16 2.48 32.39 37.01 Lethionine 1.60 1.29 18.11 14.53 Isoleucine 4.82 4.99 63.30 65.17 Leucine 8.15 8.50 106.87 111.26 Tyrosine 0.74 0.74 6.18 6.36 Phenylalanine 2.28 2.29 23.00 23.09 Tryptophan Trace Trace -- -- Cysteine Trace Trace -- -- waa = 77.06 77.37‘ N1 = 1000.00 999.3 Total Carbohydrate (weight 5) 17.30 17.20 P (as HZPOB) 1.30 1.31 2w = 95.66 95.87 aHeight percentage of the ith amino acid residue, based on a nitrogen content of 13.1% and 13.2% for component 3 from heated and unheated preparations reSpectively, as deter- mined by micro-Kjeldahl nitrogen determination. bObtained by summation of the moles of the 1th amino acid from the chromatogram, corrected to 1000 total amino acid residues. CValues extrapolated to zero concentration. TABLE 4 Elementary analysis of component 3 from heated and unheated skimmilk Element Heated preparation Unheated preparation P 0.5 0.5 S 0.59 ' -- 9 TA:L 0 V1 N 5 u The carbohydrate contents of component 3 from heated and unheated skimmilk Unheated Heated Carbohydrate preparation preparation hethod (i) (3) Hexose 7.2 6.5 Phenol-sulfuric Hexosamine 6.0 6.6 Cessi Sialic acid 3.0 2.9 warren Pucose 1.1 1.2 Dische 24"[1 17.3 1702 91 TABLE 6 Linimum molecular weights of component 3 (heated preparation) estimated from chemical analysis Component Weight percentage hinimum molecular weight Sialic acid 3.0 10,300 Hexosamine 6.0 2.990 Phosphorus 0.50 6,200 Sulfur 0.59 5.450 Tyrosine 0.75 21,800 .0 cm on 0 Ho chopdnoaaop no name 0:.m+ ma.m+ om.a+ m.a o.m Homuccaosac mo.m+ H0.m+ dm.H+ m.a m.m HomumCHohHm 00.H+ ma.m+ sH.H+ m.H o.m Homnecdeaau oe.o+ ms.o+ m:.o+ m.a m.m Hozuccacsao m:.0i 53.0: mm.0| m.a 0.: mumpeo< om.al mm.an om.ai m.a 0.0 opwpmo< H0.NI mn.m| mw.a| m.H 0.0 endgamonm em.mu Hm.ma sm.au m.a o.s mangancsm mm.ma sfl.:u me.mu m.a m.m acconc> ommao>< wnaemmom< wmaesoommm ARV Jim A I> town So 10H x av scandapswosoo AN.0 u N\r_v ammdaamoa 0H ego mohpomam Campohm ma .ampmhm nommsm mammmsn msoaam> ma Acoapmamamaa condosv m unecoasoo mo modpaoaoaa capoaosaoapomam u mqm<9 93 TABLE 8 Diffusion coefficient of component 3 (heated preparation) in veronal and veronal-5 h 00 buffers Buffer Protein concentration 020 w x 107 (mg/ml) Veronal a 5.5 3.47a 6.0 3.76a Veronal-S L 00 b 6.4 18.7 7.5 20.1b 8.9 22.0b 10.1 22.6b 8Obtained from ascending pattern of the Tiselius cell, run at 3° C, corrected to water at 20° C. bObtained from beckman Spinco Lodelo E ultracentrifuge, run at 20°C, corrected to water at 20° C. 94 TABLE 9 Sedimentation coefficient of component 3 (heated preparation) from veronal and veronal-5 M GU buffers Buffer Protein concentration 520 w x 1013 (mg/ml) ~ " Veronal 4.4 ' 3.44 5.1 3.37 6.1 3.20 Veronal-S L 00 5.0 1.47 705 ' 1039 10.1 1.32 squilibrium molecular weight data for component 3 TAT-:1.- 95 [1“ ' 10 (heated preparation) in veronal and veronal-5 h GU buffers Buffer Protein concentration hw x 10'4 Lz/hw (ms/m1) Veronal (pH 8.6, I"/2 = 0.1) 3.1 12.30 -- 4.4 9.38 -- 5.1 7.58 -- 6.1 5.39 -- Veronal-B m GU 5.0 . 3.15 1.49 6.4 2.90 1.20 7.5 2.76 1.56 8.9 2.51 1.57 10.1 2.28 2.07 96 GLU 160L ' LEGEND: 140'— 0. HEATED A. UNHEATED 120*- 100 80 RESIDUES/1000 RESIDUES 60 40 PHE 20r- AMINO ACID RESIDUE Figure 14. Amino acid profiles of component 3 from heated and unheated skimmilk. Figure 15. 97 Paper chromatogram of the hydrolysis-released carbohydrate moities of component 3 (heated preparation). Descending pattern: Whatman no. 1 chromatography paper: solvent system: butanol- pyridine-water (6:4:3 v/v); stained with tri- phenyltetrazolium chloride. Legend: A, galac- tosamine; B, glucosaméneC, galactose; D, mannose; E, fucose. 98 STANDARD SAMPLE MIXTURE A 9; i Q 0 k 99 DESENDING ASCENDING VERONAL pH&5 60005196.: F= 7_.'182ch PHOSPHATE pH 6. D A QQOua 5 F 7.82\_/le “GNOME: ”005%. :F= 7.83ch1 GLYC I NE : HCI pHZO 9200590.; F=7.84ch‘1 Fi re 16. Free-boundary electrophoretic patterns of com- gu ponent 3 (heated preparation) in buffers of lvarious pH. . It}?! I )H: 100 +1.00 *— +2.0 .— Electrophoretic Lobility (u .4--._.—. _-.-——-. +3.0 L_ Figure 17. pH A plot of electrophoretic mobilities (descending values) of component 3 as a function of pH. 6 - .1 -.—--— -“m- -—0—4 k m1-—_a44~. 101 1’4»__ / 10 U20.” x 107 CUZ sec'l ‘ k) I \ VT ‘o-n-o-m ma..- :4 rotein Concentration ("18/ m1) hixure 13. Plot honing concentration dependence of the apparent diffusion coefficient of component 3 (heated preparation) in veronal and veronal-5 h guanidine hydrochloride. Legend: 0 , veronal [3' veronal-5 H guanidine hydrochloride. 102 Figure 19. 430 -. - \ \ \ \\ \ \ 3.5 —’ \ i \\ 3.0 - \~\ \ \ \ \ \ \ \ \ 52.5 d N "D 2.0 L— 5“ 1.}; — ““S\SN— 1.0 J J J L 1 1 1 1 L o 2 4 6 d 10 Protein Concentration (mg/ml) Plot showing the concentration dependence of the sedimentation coefficient of component 3 (heated preparation) in veronal and veronal-5 M guanidine hydrochloride buffer. Legend: 0 , veronal; E], veronal-5 L guanidine hydrochloride. 103 .Homesé anacho> CH Acode mocha @opdmsv m ucocom:oo mo nguao: Hoazooaoa nSHPLfiHHSWm mo mocmcfimmot Scandapmoozoo asflnczm poam .om casedm AHE\wEv dofipnhpdmosoo Campoam m m a m m H _ a d w i. a o / / ll. / In x aJOa mw .1 All / / / / / / i / / / ll / / / om 104 4 mladcomo> :H AcoHpmthmhc woudozv \ .a\ v» .aciné odahoazoopfikx ozwzrgdzh ms pszogzoo go uxtfion pdaaomaoa asfiunfiaazvo ho mcscfiroaoc Coapmaproo:oo wCazosm poam AHE\n&v fiofideQCoosoo :HopOHA .HN mhfiddm ea ma 0a m my m m o a a. . a _ a |.o.H w i // / Lo.m .106 / 1‘1" :isure 22. 105 Sedimentation-velocity and s rium patterns for component in veronal buffer (ph 6.6; mentation-velocity patterns elapsed time of 32 minutes, the 3.1 ma/nl sanple, which minut s. edimentation-equilib- a ) (heated preparation) '/2 = 0.1). All echriments were performed at 200 C. The sedi- were taken at an with the exception of was taken at t = 16 106 SEDIMENTATION-VELOCITY SEDIMENTATION-EQUILIBRIUM 59.780 RPM. 9-55° ”,573 RPM, 6-600 6., I mglml 5. | mglml 5.l mglml 4.4m lml 3. I mglml 3. I mg/ml Fiqure 23. 107 Sedimentation-velocity and sedimentation-equilib- rium patterns for component 3 (heated preparation) in veronal-5 M guanidine hydrochloride buffer. All eXperiments were performed at 20° C. The sedimentation-velocity patterns were taken at the elapsed time of 32 minutes. 108 SEDIMENTATION-VELOCITY SEDIMENTATION-EQUILIBRIUM 59,780 RPM, 9=55° 9,34I_RP_M, 9=60° ID. I mglml IO. I mglml 8. 9 mglml) 8.9 m'ghml 6-4 m9/ml 6.4 mglml (1) (2) (3) (4) (5) (6) (9) (10) LITERATLHE CIPED Alais, and Jolles, P. 1961 CEtude Compafee des Caseino-glyCOpeptides Formes par Action de la Presure sur les Cas ines de Vache, de Brebis et de Chevre. II. tude de la Partie Non-Peptideque. Biochem. Biophys. Acta. 5;: 315. Aminoff, D. 1961. 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L., and Fujita, R. , 1958. The Theory of Sedimentation Analysis. Chem. Rev. jfi: 715. (92) Ninzler, R. J. 1955. Determination of Serum Glycoproteins. Methods. Biochem. Analy. g; 279. APPERDIK PART I FRESH SKILLILK Beat to 95° C for 30 min Adjust to pH 4.6 with 1 N RC1 Let stand overnight at 4° C and decant or centrifuge at 1000 x G for 20 min l SEPERAATART CASEIN + DENATURED SERUR PROTEIRS (Discard) Dialyze at 4° c against several changes of distilled water Pervaporate Freeze-dry PROTEOSE-PEPTONE Figure I. Preparation of the classical proteose-peptone fraction. 113 119 Composition of the Buffers Employed in This Study The following buffer preparations were used in test- ing the effect of buffer pH on the hexose content of purified component 3: 1. Citrate phosphate; pB 4.6 A = 0.1 L solution of citric acid (19.21571n.1000 ml) B = 0.2 M solution of dibasio sodium phOSphate (53.65 g foogaéiPOu ° 7n20 or 71.7 g of AaZHPOQ ‘ 12H20 in 26.7 ml of A + 23.3 ml of B, diluted to a total of 100 ml 2. Citrate phosphate; pH 7.0 Same stocks buffers as A and B above. 6.5 ml of A + 43.6 ml of D, diluted to a total of 100 ml 3. Tris citrate; pH 3.60 Same as gel buffers used in acrylamide gel electro- phoresis and starch-urea gel electrophoresis Stock solution = 91.96 g Tris (solid) + 12.05 g citric acid, diluted to a total of 100 ml Use one part stock to nine parts deionized water 4. Borate; pH 3.60 Same as buffer used in electrode compartments in acrylamide gel electrophoresis and starch-urea gel electrOphoresis. Stock solution = 881 g boric acid + 190 g NaOH, diluted to a total of 19 liters Use two Part stocks to three parts deionized water 120 Formulation for Starch-Urea Gel Ingredients: 35 ml Tris stock solution; 205 ml dis- tilled water, 40 g starch and 147 g urea. Heat Eris stock, water and starch to 650 C with stirring, add urea, heat rapidly with stirring to 900 C, degas and pour into gel bed. Preparations of Discontinuous Buffers4_StainingSolution wand Destaining Solution for Preparative Acrylamide Gel Electrophoresis and Starch-Urea Gel Electrophoresis Buffers: Tris citrate, pH 8.6 Stock solution = 91.96 g of Tris (solid) + 12.05 g Citric acid, diluted to a total of 1000 ml Lse one part stock to nine parts water Borate, pH 2.6 Stock solution = 881 g boric acid + 190 g NaOH, diluted to a total of 19 liters Use two parts stock to three parts water Staining solution: 250 ml water,.250 ml methanol, 50 ml glacial acetic acid and 20 amino or buffalo black Hashing solution: 200 ml glycerin, 1 liter water, 1 liter methanol. 200 ml glacial acidic acid for mechanical destaining. 7L acetic acid for electrolytic destaining 121 Reagents Used in Orcinol-Sulfuric Acid Method Reagent A _ 60 ml of concentrated sulfuric acid and 40 ml water Reagent B = 1.69 ml of orcinol (recrystallized from benzene) in 100 ml water 7.5 ml reagent A is mixed with 1 ml of reagent B Reagents Used in Folin-Ciocalteu Colorimetric:Reaction Reagent A = 2% Na2C03 in 0.1 N NaOH Reagent B 0.5} CuSOu ’ 5H20 in 1% Na or K tartrate Reagent C = mix 50 ml A with 1 ml 3 Reagent D Folin-Ciocalteu reagent diluted with 1 N RC1 APPENDIX PART II Standard Curves for the Colorimetric Determinations of PhOSphorus,_Trvntophan,,Cystein,»Rexose, Hexnsamine and Sialic Acid Are Given Below 122 Absorbance(660 mo) 1.0 0.3e- 0.6»— (9 0.4L_ 0.2.— 0 L L i i 0.06 0.12 0.18 mg P Figure II. Standard curve for phOSphorus. 6:24 Transmissior (4’90 mu) 124 l 1 l__ Figure III. “30- 40 6O 30 mg Rexose Standard curve for galactose. 100 p Transmission(545 mu) 125 10 l, I O\ T l 1 L O L2°5 25 37.5 so HS Bexosamine Figure IV. Standard curve for glucosamine-RC1. fl Transmission(549 mu) 126 O.) T O\ '\l I (\J 1 I...) __ _. 1— )— Fixure V. Standard curve for H-actylneuraminic acid (synthetic). j Transmission(590 mu) 127 \\ (J (J) O\ —o I 1 1 l 1 1 0 24 43 72 96 1 N“— 0 mg Tryptophan Fisure VI. Standard curve for tryptophan. ' J ,9 Iran 53ml 3 s .1 o '. (41 2 mm) 128 l l l L J 0 0.2 0.4 0.6 0.3 1.0 u mole Cysteine Figure VII. Standard curve-for cysteine. 129 Buffer Preparations Used in Free-Eoundary Electrophoresis The following quantities were made to 2 liters with redistilled water: 1. Sodium veronal; pR 2.6; Ifl/Z = 0.2 72.0 ml of 5.0 k MaCl 3.5 ml of 2.0 h BCl 30.0 ml of 0.5 L sodium veronal 2. Sodium phOSphate; on 7.0; (7/2 = 0.2 72.0 ml of 5.0 L AaCl 1.6 ml of 4.0 L waazpcu 3. Sodium nhOSphate; on 6.0; (”/2 = 0.2 72.0 ml of 5.0 h KaCl 9.2 ml of 0.5 h fiazfiPou 6.6 m1 of 4.0 h AaRZPOQ 4. Sodium Acetate; pH 5.0; ("/2 = 0.2 72.0 ml of 5.0 L LaCl 20.0 ml of 2.0 k JaAc 3.7 ml of 3.5 n acetic acid 5. Sodium acetate; pH 4.0; (w/Z = 0.2 72.0 ml of 5.0 R MaCl 20.0 ml of 2.0 L EaAc 33.7 ml of 3.5 A acetic acid 6. Glycine - 301; pH 3.5; F72 e 0.2 72.0 ml of 5.0 E KaCl 36.6 ml of 1.0 h glycine - 1.0 M NaCl 1.7 ml of 2.0 A BCl 130 0.2 7. Glycine - RC1; pH 3.0; ("/2 72.0 ml of 5.0 E EaCl 31.6 ml of 1.0 h glycine - 1.0 H UaCl 4.2 ml of 2.0 M RC1 Q. Glycine — BCl; pH 2.5; |”/2 = 0.2 72.0 ml of 5.0 k fiaCl 22.3 ml of 1.0 R glycine - 1.0 h NaCl 9.6 ml of 2.0 M RC1 9. Glycine - RC1; pH 2.0; ("/2 - 0.2 72.0 ml of 5.0 L NaCl 10.6 ml of 1.0 L glycine - 1.0 h NaCl 14.7 ml of 2.0 h HCl Cogppsition_9f Verongl_Buffer Used‘in Ultracentrifugal and Diffusion Runs Veronal; pm a.6; ("/2 = 0.1 20.65 sodium barbiturate 2.797 cm barbituric acid Lade up to a total of 1 liter with redistilled water Properties of the Solvents Used for molecular Weight Calculations and Correction of the Sedimentation and Diffusion Coeffic$ents to Water ('- Q :1 fl 1 1'3 AJI—ra I Densities and relative viscosities of some of the solvents Solvent 0 o/U w F20o C Veronal buffer 1.101 1.1034 Veronal - 5 h guanidine HCl buffer 1.437 1.1215 ————i 131 Correction of the Observed S to Standard Conditions The experimentally determined sedimentation coeffi- cient was corrected to a value corresponding to sedimenta- tion coefficient in water at 200 C. The equation commonly used is 52 . =( ” w,t) (u o,t (1 - VIOZQJw ST 0’“: Uw,20 U w,t 1 - v Pt,o where the first term is the viscosity of water at the emperimental tenperature relative to that at 200 C, the second term is the relative viscosity of the solvent to that of water, and the last term is the relative buoyancy term containing the partial Specific volume, the density of water at 200 C, and the density of the solution at the CXperimental temperature. 1 Correction of the Observed DiffusionfCoefficient to Standard Conditions The eXperimentally determined diffusion coefficient Imis corrected to a value corresponding to diffusion coeffi- cxient in water at 200 C. The equation used is D20N=(‘27%2%‘t)(%ff ('gfl‘fg DI vfluere QT is the experimentally measured diffusion coefficient at 'temperature t, t is the temperature of the diffusion GDUDerdnent in degree centigrade, (Uo,t/in,t) is the rela- tiVTB viscosity of the solvent to that of water, 0 w,t is the ‘viscosity of water at the temperature of the eXperiment, and I] 20 is the viscosity of water at 200 C. ,w -‘ . - — . w w» - , vv , ‘ ‘ - ’— - ‘ko partial SUGCLfic f.in e “as calculated fror -,T-2 ‘. . ‘r. 1_‘ _' . ,“. k , ,1 ‘A f. vc,‘g \.‘ ‘n ‘ L ‘Q - ‘J.'IO 8.0a 1- 1‘83 3.130 191. lit/13 Zulu- “t: ..‘CJ.4..‘-A’1D Dcl‘CEi;lt’-1 CS f'1qr‘» 9M1 V.~ ‘75..-$- ~xv~ ‘\" ,..,t- I,.’\’ C\.-.; l,'O...'y\-,. & VG CO ')(.1.1:‘.;L--‘ .IL I M LL: ,4: o -- (.- é‘ o. l where v : p.rtial specific volune of the prosoix n th 1 = partial Speci‘ic vein”: of trc i coz-;r~o::e::t .. x;- p aw th '1 : “ei hr of use 1 PO'hoient a 5a3ple tatulatio f snot on tno n It pate. i».is be .ou, 51‘, of 0.71}.'ru: