THE INDUCTION 0F RECESSIVE .SUPPRESSOR MUTATIONS AND SOMATIO RECOMBINATION. IN THE COMMON-AB DIPLOID‘ 0F SCHIZOPHYLLUM COMMUNE ‘E‘hesis for the Degree of Ph. D. MtCHIGAN. STATE UNIVERSITY DALUCE IVAN. MiLLS 1969 m4 LIBRARY "3 Michigan State I 1 University V“ 'T This is to certify that the thesis entitled The Induction of Recessive Suppressor Mutations and Somatic Recombination in the Common-£12: Diploid of Schizophjllum commune presented by Dallice Ivan Mills has been accepted towards fulfillment of the requirements for Ph. D. degree in BotanX and Plant Pathology [Mia/[4 Major prof . or Date June 12, 1969 0-169 BINDING IV A & SBNS' 800K Bill)!” INC. LIBRARY 01100188 ”II-nun Italian ABSTRACT THE INDUCTION OF RECESSIVE SUPPRESSOR MUTATIONS AND SOMATIC RECOMBINATION IN THE COMMON-Ag, DIPLOID or SCHIZOPHYLLUM COMMUNE BY Dallice Ivan Mills The objectives of this research were to: l) induce recessive suppressors of auxotrophic mutations that would be effective for detecting recombinational events, 2) develop techniques for synthe- sizing stable diploid strains, and 3) use the recessive suppressors for detecting recombinational events in diploid strains of Schizophyllum commune. Genetic analyses have been made to detect recessive suppressor mutations in twelve prototrophic strains of _S_. commune derived by treating an arginine dependent strain with either hydroxyl- amine, nitrosoguanidine or acridine red. The results indicate that one strain possesses a recessive suppressor, 322, which maps outside the gig-_Z locus and is capable of suppressing auxotrophy conferred by the 155:3 mutation. This suppressor is recessive in dikaryons and diploids and is incapable of suppressing auxotrophy conferred by eight other loci. Prototrophy in the remaining eleven strains resulted from either intragenic suppression, reversion, or Dallice Ivan Mills from a suppressor mutation that is closely linked to the 212;; locus. Heterokaryotic allelic tests with the eleven strains indicate that the mutation to prototrophy is recessive. The mutation to prototrophy in each of the twelve strains segregates as a single gene through at least two generations of backcrossing to the parent auxotroph. No recessive suppressor mutations were detected among 764 prototrophs induced with ultraviolet light. A technique was developed which allows for the recovery of stable vegetative diploid strains from the common-A_B heterokaryon of g. commune. The common-ALB diploid, which is heterozygous for auxotrophic mutations, is prototrophic and resembles the homokaryon in morphology. An analysis of the segregation of five biochemical markers and mating-type factors from a diploid X haploid cross closely fit the predicted values for triploid segregation. At least four linkage groups appear to be present in_§. commune based on the segregation of mutant markers in segregants of an aneuploid from the diploid X haploid cross. Somatic recombination in the common-A_B diploid was studied using the recessive suppressor, £1.11» to detect recombinational events. An analysis of spontaneous and ultraviolet induced recombi- nants indicate that diploid, aneuploid and haploid individuals were recovered. Results from preliminary experiments indicate crossing over is rare and haploidization proceeds via stages of aneuploidy. THE INDUCTION OF RECESSIVE SUPPRESSOR MUTATIONS AND SOMATIC RECOMBINATION IN THE COMMON-fig DIPLOID OF SCHIZOPHY LLUM COMM UNE BY Dallice Ivan Mills A THESIS Submitted to Michigan State University in partial fulfillment of the requirements for the degree of DOC TOR OF PHILOSOPHY Department of Botany and Plant Pathology 1969 DEDICATION To Mary ii ACKNOWLEDGMENTS A special dept of gratitude is due Dr. Albert H. Ellingboe, my major professor, for his guidance and encouragement during this investigation and in the preparation of this manuscript. Special thanks are also due Drs. D. Schoenhard, E. C. Cantino and R. P. Scheffer for their assistance in the preparation of this manuscript. I wish to thank Dr. W. G. Fields for making available his photographic equipment and for his many helpful suggestions during the preparation of the photographs. Appreciation is also due Judy Crawford, Judy Chen and Cindy Daroci for technical assistance. I am deeply greatful to my wife, Mary, for her understanding and assistance during the course of this investigation. The finantial support for this investigation was furnished by the Atomic Energy Commission for which I am indebted. iii TABLE OF CONTENTS Page DEDICATION. ii ACKNOWLEDGMENTS . . iii LIST OF TABLES . vi LIST OF FIGURES . ix INTRODUCTION . . . 1 LITERATURE REVIEW . 3 MATERIALS AND METHODS. 19 Schizophyllum cultures . l9 Tester Strains 19 Media . . . 23 Single Spore Isolation and Determination of Germination Percentage 23 Purification of Cultures. . . 24 Scoring for Nutritional Requirements 25 Heterokaryotic Allelic Tests . 25 Experiments with Ultraviolet Light . 26 Experiments Using Growth Factor Analogues 27 Induction of Mutations to Prototrophy with Hydroxylamine, N- methyl- N'- nitro- N- nitrosoguanidine and Acridine Red. . Tests of the Prototrophs Recovered Following Treatment with Mutagens . Synthesis and Isolation of Diploid Strains Diploid X Haploid Mating. . . Testing for Mating- Type Factors of Progeny and Segregants of the Diploid (D- 1) X Haploid Cross Detection of Somatic Recombinational Events in Common-_A__B Diploids Statistical Analysis iv 27 3O 31 31 32 33 34 Page RESULTS.....................35 Growth Responses in the Presence of Growth Factor Analogues. . . . . . . . . . . . . 35 Prototrophs Isolated Following Treatment with Ultraviolet Light . . . . . . . . . . . . 35 Induction of Recessive Suppressor Mutations with Acridine Red. . . . . . . . . . . . 39 Recessive Suppressor Mutations Induced with N- --methyl N'- nitro- N- nitrosoguanidine. . . . . . 43 Recessive Suppressor Mutations Obtained Following Treatment with Hydroxylamine. . . . . . . . . 47 Recombination Between the Suppressor Mutations and the arg-Z locus. . . . . . . 53 Supersuppressibility Tests with su- -l and Eight Different Auxotrophic Mutations . . . . . . . . 58 Recovery of Diploid Strains from Common-AB Heterokaryons . . . . 65 Segregation of Auxotrophic Mutations and Mating- Type Factors from a Diploid X Haploid Cross . . . . . 68 Synthesis of Multiply Auxotrophic Strains. . . . . . 77 Verification of Diploid Strains which Possess s__u- -l . . . 83 Somatic Recombination in Common- -1_A_B Diploids . . . . 85 Isolation and Characterization of Recombinants Derived from Common-_A__B Diploids . . . . . . . . . . 87 DISCUSSION....................103 SUMMARY....................114 LITERATURE CITED . . . . . . . . . . . . . . . . 116 Table 1. LIST OF TABLES Growth of four auxotrophic strains and a wild type strain on minimal medium supplemented with the following growth factor analogues: A) pyridine-3-su1fonic acid; B) picolinic acid HCl; C) acetyl pyridine; D) benzimid- azole; E) 2, 6 diamino purine SO4 . Total number of colonies isolated as prototrophs follow- ing treatment of six auxotrophic cultures with UV irradiation. The number of colonies obtained following UV irradia- tion that were tested in heterokaryotic allelic tests Growth of cultures isolated form minimal medium following treatment of mycelial fragments of an arg-Z culture with acridine red. Segregation of the mutations to prototrophy of two cul- tures recovered following treatment of an arg-Z culture with acridine red when backcrossed to an arg-Z strain Growth of cultures isolated from minimal medium following treatment of mycelial fragments of six auxotrophic cultures with nitrosoguanidine Segregation of the mutations to prototrophy of two cultures recovered following treatment of an arg-Z culture with nitrosoguanidine when backcrossed to an arg-Z strain . Growth of cultures which were isolated from minimal medium following treatment of mycelial fragments of an arg-Z culture with hydroxylamine . vi Page 36 38 40 41 42 46 48 49 Table Page 9. Segregation of the mutation to prototrophy of eight strains following treatment of an arg-Z culture with hydroxylamine when backcrossed to an arg-Z strain . . 50 10. Recovery of arginine dependent progeny from crosses of suppressed strains X wild type strains on minimal medium...................54 11. Recovery of arginine dependent progeny from crosses of suppressed strains X wild type strains on minimal medium...................59 12. Progeny identified from crosses of su-l (arg-Z su-l) with eight doubly auxotrophic strains, each of which possessed arg-Z and one additional mutation . . . . . 61 13. Growth of dikaryons derived from crossing arginine dependent progeny from two different crosses with testerstrains. . . . . . . . . . . . . . . . . 62 14. The frequency of recovery of mutant markers in 153 progeny of the common-A_B diploid X haploid . . . . 69 15. The expected and observed frequencies of mating-type factors among progeny from a diploid X haploid cross based on trisomic segregation . . . . . . . . . . 71 16. Segregation of A and B mating-type factors among progeny of the diploid X haploid cross . . . . . . . 72 17. Segregation for nutritional dependence among 67 progeny derived from an A41/A42 B41/B42 diploid . . . . . . 73 18. Segregation of A mating-type factors with auxotrophic markers among 153 progeny from the diploid X haploid mating...................75 19. Segregation of I_3 mating-type factors with auxotrophic markers among 153 progeny from the diploid X haploid mating...................76 20. Recovery of mutations present in segregants of an aneuploid derived from the diploid X haploid cross . . 78 vii Table Page 21. Recombinant progeny derived from crossing strains possessing two auxotrophic mutations with a suppressed strain, arg-Z su—l . . . . . . . . . . 80 22. Recombinant progeny derived from crossing suppressed strains, each of which possessed a single different auxotrophic mutation . . . . . . . . . . . . . 82 23. Recombinant progeny derived from crossing suppressed strains, each of which possessed two different auxotrophic mutations . . . . . . . . . . . . . 84 24. Recovery of auxotrophic mutations present in the progeny derived from diploid X haploid crosses . . . 86 25. Spontaneous recombinants recovered from rapidly growing sectors of the common-£3 diploid, D-9 . . . 9O 26. Segregation of auxotrophic mutations in the progeny derived from crossing haploid spontaneous recombi- nants selected at random and one aneuploid recombi- nant with a wild type strain . . . . . . . . . . . 92 27. Growth of primary and secondary segregants derived fromtheD-9diploid. . . . . . . . . . . . .. 96 28. Segregation of auxotrophic mutations in the progeny derived from crossing secondary segregants from a prototrophic recombinant with a wild type strain . . . 97 29. Recombinants recovered from fast growing sectors following treatment of strain D-9 with UV irradiation . 98 30. Nicotinic acid-requiring segregants from the proto- trophic sectors that were isolated following treatment of D-9 with UV irradiation . . . . . . . . . . . 100 31. Spontaneous recombinants derived from a common-fl diploid, D-25, which were isolated from yeast medium as pink sectors or in areas of the mycelium that exhibited sparse growth . . . . . . . . . . . . 102 viii Figure LIST OF FIGURES Genetic map of Schizophyllum commune . Growth responses of suppressed strains in heterokaryotic allelic tests . Growth of suppressed homokaryons on migration- complete (MC) and minimal (MM) media . Growth of arginine requiring progeny, derived from the cross su-l (HA 41 X 699 (wild type), as homo- karyons and dikaryons with an arg-Z tester strain Growth of dikaryons derived from crossing three different arginine dependent progeny from two crosses with three different testers . Diploids of Schizophyllum commune Sectors from common-_AB diploid, D-9, on arginine drop-out medium . ix Page 20 44 51 56 63 66 88 INTRODUCTION A considerable effort has been expended to elucidate the mechanisms of somatic recombination in fungi (Pontecorvo 1956; Ellingboe and Raper 1962a; Sweizynski 1963). At least three mechan- isms have been described. Pontecorvo (1956) described a mechanism of recombination in diploid strains of Aspergillus nidulans whereby haploidization of the diploid nucleus proceeds via stages of aneuploidy, with infrequent mitotic crossing over. Crossing over and haploidi— zation are distinct in time and space and haploidization results in recombination of genes on different chromosomes. The methods for detecting recombinational events in Aspergillus were not available to those studying somatic recombina- tion in Schizophyllum commune and Coprinus spp. In the absence of stable diploid strains and recessive suppressors (which had been used to detect recombination in Aspergillus) studies of somatic recombi- nation in g. commune and Coprinus spp. utilized the technique of in- compatible dikaryotic -homokaryotic (di-mon) matings to detect re- combinational events in vegetative mycelium. Since neither nucleus of the dikaryon was compatible with the nucleus of the homokaryon, dikaryotization of the homokaryon could result when recombination l 2 between the two nuclei of the dikaryon produced a nucleus that was compatible with the homokaryon. Recombinants were detected as dikaryotic sectors in the homokaryotic mycelium. The results obtained with S. commune using this technique suggested two new mechanisms of somatic recombination (Ellingboe and Raper 1962a; Ellingboe 1963). A meiosis-like mechanism of re- combination in vegetative cells was postulated to account for the high frequency of recombination of linked and unlinked genes. A second mechanism, Specific Factor Transfer, was suggested to account for the transfer of only an incompatibility factor specificity from each of the two nuclei of the dikaryon into the nucleus of the homokaryon. The role of the intervening homokaryon in determining the mechan— ism of recombination in incompatible di-mon matings is not known. The transfer of the incompatibility factor ,specificities was confound- ed with the method used to detect recombinational events. New tech- niques for detecting recombinational events, therefore, are needed. The purpose of this research was to develop new techniques for studying somatic recombination in S. commune. The specific objectives of the research were to: l) induce recessive suppressors of auxotrophic mutations that would be effective for detecting recom- binational events; 2) develop techniques for synthesizing stable diploid strains; and 3) use the recessive suppressors for detecting recombi- national events in diploid strains of S. commune. LITERATURE REVIEW There are numerous examples in the literature where a second mutation, at a site different from a primary mutation, par- tially or completely restored the function lost by the primary muta- tion. These secondary mutations were termed suppressor mutations. Two types of suppressor mutations are known. Intragenic suppres- sion is the restoration of a lost function by a second mutation which is located within the same gene as the primary mutation. Intergenic suppression is the restoration of a lost function by a secondary muta- tion that maps outside the site of the primary mutation. The mech- anisms of intra- and intergenic suppression may be very diverse (Yanofsky, Horn and Thorpe 1964; Capecchi and Gussin 1965). Suppressor mutations have been reported in bacteria and a variety of fungi including Aspegillus (Lilly 1965; Weglenski 1966; Gajewski and Litwinska 1968), Neurospora (Giles and Partridge 1953; Davis 1961; McDougal and Woodward 1966; Seale 1968), Coprinus (Lewis 1961; Morgan 1966) and Saccharomyces (Hawthorne and Mortimer 1963; Kakar 1963; Manney 1964).. These investigations have revealed that suppressors may be dominant, semidominant or reces- sive (Lilly 1965; Weglenski 1966; Gajewski and Litwinska 1968). It is not fully understood why suppressor mutations exhibit these differ- ent phenotypic responses. The following is a brief review of the work which has given some insight into how suppression of auxotrophy is believed to occur in the systems investigated in bacteria, fungi, and yeast Suppression has been most rigorously studied with the alka- line phosphatase gene of Escherichia coli (Garen and Siddiqi 1962; Weigert and Garen 1965; Weigert, Lanka and Garen 1967) and with the rII genes of the T4 bacteriophage (Benzer and Champe I962; Stretton and Brenner 1965; Kaplan, Stretton and Brenner 1965). The amber triplet, UAG, and the ochre triplet, UAA. have been identified as nonsense triplets or chain terminating codons which do not code for any amino acids in suppressor-negative strains of _E. SEE (Sarabhai, Stretton, Brenner and Bolle 1964; Brenner, Stretton and Kaplan 1965; Weigert, Lanka and Garen 1967). That amber mutations result in the cessation of polypeptide chain propagation has been confirmed by demonstrating that only fragments of coat protein were found in T4 bacteriophage possessing amber mutations. The length of the poly- peptide chain was determined by the position of the amber mutation from the end of the gene corresponding to. the N-terminal end of the polypeptide chain (Sarabhai, Stretton, Brenner and Bolle 1964). Sup- pression of amber mutants in the alkaline phosphatase gene and the coat protein of T4 phage was by insertion of an amino acid at the site of the amber mutation thus allowing for the propagation of the entire polypeptide chain (Kaplan, Stretton and Brenner 1965). Subsequent studies have implicated mutated transfer RNA in the mechanism of suppression. In a cell free system where amber suppressible mes- senger RNA is used as messenger, suppression would occur only when t-RNA from a suppressor strain of E. 2313 was present (Capecchi and Gussin 1965; Garen 1968). Amber suppressors which map anywhere in the genome suppress the amber mutation regardless of its location in the genome of the bacteria or bacteriophage. The suppressors of the £11112 allele in the in (amination) locus, which codes for the primary structure of the NADP-linked enzyme glutamate dehydrogenase (GDH) in Neurospora crassa, were also capable of suppressing mutations present in three unrelated genes (Seale 1968). In this respect, the suppressors of £111 were analogous to the amber suppressors in E. go_li and the allele specific super-suppressors in yeast (Hawthorne and Mortimer 1963; Gilmore and Mortimer 1966; Mortimer and Hawthorne 1966). Therefore, amber suppressors and super-suppressors are said to be allele specific and not gene specific. Some ochre suppressors reported in E. Q map at genet- ically different loci from amber suppressors while others map very close to or within the same loci (Signer, Beckwith and Brenner 1965; Eggertsson and Adelberg 1965). The level of restored activity by ochre suppressors is very low (1-5%) in contrast to the level of suppression by amber suppressors (30-63%) (Gorini and Beckwith 1966). Some ochre and amber suppressors are dominant over their wild type alleles (Eggertsson and Adelberg 1965; Gorini and Beckwith 1966; Seale 1968). Mutations to missense result in the transformation of a codon specifying one amino acid into a codon specifying another amino acid. Suppression of a missense mutant, A36, in the structural locus for the tryptophan synthetase A—protein in E. go_li, was by the production of a transfer RNA which was capable of introducing glycine into the polypeptide chain in response to the AGA triplet which nor- mally codes for arginine (Carbon, Berg and Yanofsky 1966). Trans- fer RNA from strains carrying the suppressor of mutant A78 substi- tuted glycine for cysteine in poly UG directed synthesis of a copoly- peptide chain (Gupta and Khorana 1966). An entirely different mechanism of suppression was suggest— ed for pyr-3 (pyrimidineless) mutants in Neurospora crassa, proline- less mutants in Aspergillus nidulans and isoleucineless mutants in yeast. Suppression of m} mutants appeared to be through induction of an enzyme defect in the pathway leading to arginine synthesis which resulted in the diversion of precursors of arginine synthesis to the pool leading to pyrimidine synthesis (Davis 1961, 1962; Davis and Woodward 1962). Suppression by recessive or dominant suppres- sors of pro mutants in A. nidulans was suggested to result from the alteration of an enzyme which permitted the synthesis of proline by an alternative pathway (Weglenski 1967). A similar mechanism of suppression was suggested for the nonspecific suppressors of iso— leucine mutants of yeast (Kakar 1963). The mechanism of suppression of methionine suppressors and purple color suppressors in Coprinus lagopus (Lewis 1961; Morgan 1966) and suppressors of the arg-Z locus in Schizophxllum commune (Mills and Ellingboe 1968) is not known. Recessive suppressors, regardless of their mechanism of suppression, have been extremely useful tools for studying somatic recombination in Aspergillus nidulans (Pontecorvo and Kafer 1958; Kafer 1961) and Coprinus lagopus (Cowan and Lewis 1966). Diploid strains of A. nidulans were synthesized which were heterozygous for numerous auxotrophic mutations and the suppressor, but homo- zygous for the mutation upon which the suppressor acted. When the diploids were plated on a selective medium, either a recombinational event which lead to the production of a diploid homozygous for the suppressor or a haploidization event which yielded a haploid strain with the suppressor allele would allow normal growth. An extensive analysis of somatic recombinants obtained from heterozygous diploids in _A.nidu1ans has resulted in the description of the Parasexual Cycle (Pontecorvo 1956). The steps in the Para- sexual Cycle are: 1) the fusion of unlike nuclei in the heterokaryon 2) mitotic crossing over may occur during the multiplication of the diploid nuclei and 3) haploidization of diploid nuclei via stages of aneuploidy (Pontecorvo 1956). In the Parasexual Cycle, crossing over or haploidization of the diploid nuclei via stages of aneuploidy may yield recombinant nuclei. Crossing over occurs in approximately one out of 500 nuclear divisions. The rarity of crossing over is evident in that a clear case of crossing over in two different regions during the same division has never been observed. If a diploid nucleus were heterozygous for several markers on one chromosome, segregation in any one re- combinational event would occur only for the markers distal to the crossover. Markers proximal to the exchange are unaffected. Because of these infrequent exchange crossovers, it was possible to order the genes on chromosomes using a "mitotic map" by observing the segregation of genes distal to the crossover. Markers that re- mained heterozygous were proximal to the crossover (Pontecorvo 1956). Since the haploidization process proceeded via stages of aneuploidy, barring infrequent crossovers, whole chromosomes assorted recombining genes only on different chromosomes. When aneuploid strains were recovered as segregants from diploid strains, some chromosomes were disomic and heterozygous for all markers. Subsequent haploidization which yielded the chromosome monosomic resulted in expression of the auxotrophic mutations (Pontecorvo 1956). This method of haploidization provided a convenient method for es- tablishing linkage groups in g. nidulans. Recessive suppressors of r_n_e_t (methionineless) in 9. la 0 us have been used to detect recombinational events in a dikaryon (Cowan and Lewis 1966). Though only 6 recombinants were recovered and analyzed, the recovery of haploid and disomic nuclei suggested a mechanism of haploidization proceeding via stages of aneuploidy, as expected with the Parasexual Cycle. 1 The methodology and techniques applied in the study of somatic recombination in _A_. nidulans were not available for a study of somatic recombination in Schizophyllum. In Schizophyllum commune and Coprinus spp. , heterothallic basidiomycetes, compatibility is con- trolled by two unlinked mating factors, _A and E. Matings between two strains with dissimilar E and E factors (1. e. _A_lB_1 X £2 E) results in the establishment of the dikaryon, the secondary mycelium, which has two haploid nuclei per cell. The diploid phase is short in duration and normally is confined to the basidium. Meiosis proceeds immediately following the formation of the diploid nucleus. The four haploid nuclei migrate into the four basidiospores that are formed on the basidium (Raper 1966). Matings between strains with similar £1 factors (1. e. ALE} X El E2) or similar E factors (El _111 X £2 E) result in the establishment of common-é or common-E heterokaryons, 10 respectively. A third type of heterokaryon, the common-_A_B hetero- karyon, results from matings between strains with similar E and E factors. That transient diploid nuclei exist in vegetative mycelium in higher fungi has been tacitly accepted since Quintanilha (1939) first demonstrated nuclear exchange in Coprinus. However, only recently have diploid strains been recovered in three different species of higher fungi. They have been recovered from common-£1 heterokaryons of Coprinus lagopus (Casselton 1965); from incompatible dikaryotic- homokaryotic (di-mon) matings in (_3. radiatus (Prud'homme 1965); and in S. commune from common-E heterokaryons (Parag and Nachman 1966), compatible dikaryons (Koltin and Raper 1968) and common-AE heterokaryons (Mills and Ellingboe 1969). Casselton (1965) was able to obtain diploids from a common-_A heterokaryon of 9.1agopus heterozygous for complementing auxo- trophic mutations in the two nuclei. Since the oidia are uninucleate, only diploid oidia which resulted from a fusion of two unlike nuclei could germinate and produce a colony on a nonsupplemented medium. The diploid strains were very stable. Only rare haploidization yielded intermediate aneuploids. The diploid nucleus was apparently unstable when in a dikaryon with a haploid nucleus and always underwent hap- loidization before the dikaryon fruited. A common-E diploid in S. commune was found to be stable 11 as a homokaryon but was unstable when mated to a compatible strain (Parag and Nachman 1966). Germination and viability of progeny of a diploid X haploid cross were both very low. Although all the mu- tations present in the diploid and haploid were recovered in the prog- eny of this mating, the segregation of these mutations was not in accordance with triploid segregation. Koltin and Raper (1968) discovered an unusual mating in which the product of the interaction of two compatible strains, each with different auxotrophic mutations, had the morphology of a haploid rather than a dikaryon. The product of this mating was also proto- trophic and compatible with either parent. The authors concluded that the establishment of the dikaryon in S. commune is controlled by a dominant gene, 213+. Interactions between strains with the re- cessive allele, gli_k, results in the formation of a diploid mycelium. In the absence of diploids and recessive suppressors, the most complete analysis of somatic recombination in Coprinus spp. and Schizophyllum has been done using dikaryotic-homokaryotic (di-mon) matings for the detection of recombinational events (Quintanilha 1939; Papazian 1954; Crowe 1960; Ellingboe and Raper 19623.; Ellingboe 1963, 1964; Swiezynski 1962, 1963). The dikaryotization of a homokaryon by a dikaryon was first studied in Coprinus lagopus by Buller in 1931 (Buller 1931). The process was later termed the "Buller Phenomenon" by Quintanilha 12 (1937). Three kinds of matings were shown to occur. They may be 1) compatible, where both nuclei of the dikaryon are compatible with the nucleus of the homokaryon (fig +_A_2 B_2) X _A_3 E2, 2) hemi- compatible, where only one nucleus in the dikaryon is compatible with the nucleus of the homokaryon (£1 E_l + £2 E_2) X 1&1 El, and 3) incompatible, in which neither nucleus of the dikaryon is compat- ible with the nucleus of the homokaryon (El E1 + A_2 E_2) X El E2. In the compatible and hemicompatible matings, a nucleus of the di- karyon which is compatible with the nucleus of the homokaryon mi- grates into the mycelium of the homokaryon and forms a new dikaryon (A1_1+£-s2> X é§B_3-—>(A1§1+A§_B_3)°r(é_2.§§+A_313_31——> and (El __1 + 1_A_2 E_2) X Al El——)(_A_2 E2 + __1 _1). The incompatible mating is not expected to result in the dikaryotization of the homo- karyon. An infrequent recombinational event leads to an "Illegitimate" dikaryotization of the homokaryon (El _B_l + _A_2 E_2) X E_l E2 (_A_2 _l + __1 E2) (Quintanilha 1939; Papazian 1954). The mechanisms of recombination which ultimately result in the formation of a recom- binant nucleus have been the subject of considerable investigation. The preliminary work (Quintanilha 1939; Papazian 1954) demonstrated that there had been an exchange of genetic material between the nuclei of the dikaryon. Further evidence (Papazian 1954) for somatic recombination was derived from the fact that following two successive incompatible di-mon matings, hyphal tip isolation 13 yielded a nucleus of a genotype which at no point had been introduced into either of the di-mon matings. No evidence for disomy was ob- served. Additional evidence for somatic recombination in incompatible di-mon matings has been presented (Ellingboe and Raper 1962a; Ellingboe 1963, 1964). A number of different auxotrophic mutations introduced into the cross in each of the three types of nuclei were used to determine the mechanism of recombination. One hundred and seventy eight recombinants of independent origin, selected only on the basis of recombinant mating-type factors, were analyzed from a total of 7,160 incompatible di-mon matings (Ellingboe and Raper 1962a). Two classes of individuals were described. Class I consisted of those individuals that possessed non-selective markers in various combina- tions from the nuclei of the original dikaryon. Class II consisted of those individuals that possessed, aside from the recombined mating- type factors, only the non-selective markers from the homokaryon. The recombination frequencies of linked and unlinked auxotrophic mu- tations of class I individuals were indistinguishable from frequencies observed via the standard sexual cycle, and was distinctly different from recombination expected via the Parasexual Cycle. There were no aneuploid recombinants observed and no indications that recombina- tion and haploidization were separable in time and space. The mech- anism of recombination of class II individuals involved some event 14 which transferred only incompatibility factors from the two nuclei of the dikaryon into the nucleus of the homokaryon. Subsequent experi- ments designed to study the mechanism of recombination of class II individuals confirmed the uniqueness of a second mechanism of somatic recombination in S. commune. Ina comprehensive series of experiments, Ellingboe (1963) demonstrated conclusively that incompatibility factor specificities of the dikaryon could be recovered in the genome of the homokaryon without concomitant transfer of closely linked auxotrophic mutations. This novel mechanism of recombination was termed Specific Factor Transfer. That only the incompatibility factors were transferred was demonstrated in the following manner. The _A mating—type factor consists of two closely linked subunits, _‘l and L (Raper, Baxter and Ellingboe 1960). Using incompatible di-mon matings, where one nucleus of the dikaryon possessed pa_b (para-aminobenzoic acid re- quiring mutation) situated between the _oz__ and .8. subunits while the other component possessed M (adenine-requiring mutation) which mapped O. 5 units from. the El subunit, it was shown that without concomitant transfer of these auxotrophic mutations, the g_ and L specificities from one nucleus and the E factor specificity from the other nucleus of the dikaryon were transferred into the genome of the homokaryon (Ellingboe 1963). Further evidence for Specific Factor Transfer was substantiated by the recovery of the £15) mutation 15 (unknown requirement), a mutation linked tofi and introduced into the mating in the homokaryon, in all of the recombinants. Further- more, the recombinants possessed the §1_1_ mutation (unknown require- ment) not linked to mating-type factors that was introduced into the cross only by the homokaryon. The author concluded that " The in- corporation of specific genetic material into the nucleus [of the homo- karyon] would have to assume a specificity of incorporation analogous to the incorporation of a temperate phage into a bacterium and the prophage's association with a specific site on a bacterial chromosome" (Ellingboe 1963). This unique mechanism of somatic recombination has not been observed in Coprinus spp. nor have these types of experiments been performed. Further evidence for a meiosis-like mechanism of somatic recombination in S. commune was obtained with the recovery of a larger sample of recombinants from a single incompatible di-mon mating (Ellingboe 1964). The 61 recombinant nuclei detected on the basis of recombinant mating-type factors comprised 43 genotypes. The frequency of linked and unlinked genes was compatible with a meiosis-like process of reduction of a diploid nucleus to a haploid nucleus. That no class II recombinants were recovered among the recombinants of this dikaryon suggests that Specific Factor Trans- fer may be lacking .in some incompatible di-mon matings. Neither of the two recombinational mechanisms described 16 in _S_. commune have been acknowledged in incompatible di-mon matings in two species of Coprinus. Progeny analysis of derived dikaryons from incompatible and hemicompatible di-mon matings was a method used to detect somatic recombination in _(_I_. lagopus (Swiezynski 1962, 1963). Germination of the basidiospores was low in many derived dikaryons (2-71%) with 10 of the 18 derived dikaryons having less than 10% germination. The viability was low when spores did germinate and the segregation of mutant markers was abnormal for most dikaryons. The results were interpreted as indicative of a parasexual mechanism of recombination with haploidization proceed- ing via stages of aneuploidy. Other techniques have been employed to detect somatic recombination in the Basidiomycetes. Somatic recombination has been detected in Coprinus radiatus using a triheterokaryon, i. e. , a mycelium with three nuclear types (Prud'homme 1965). Two of the nuclear types, although dissimilar in mating-type factors, possessed a morphological mutation, col, which prevented dikaryosis and, therefore, none of the three possible combinations of two gave a di- karyon. Dikaryotic sectors which arose via a recombinational event were analyzed for their genetic constitution by progeny analysis and dedikaryotization by maceration. The conclusions drawn were 1) that haploidization proceeded via stages of aneuploidy since numerous aneuploid and some diploid strains were recovered 2) recombination 17 via crossing over is rare (none observed in 21 recombinant nuclei) and 3) there is in many cases, a parental association of independent non-selected markers. An analysis of 14 prototrophic hyphal tips of a common-_AE heterokaryon of S. commune which was nutritionally forced on min- imal medium by non-allelic auxotrophic mutations indicated recom- bination in all 14 cases with evidence for disomy of certain chromo— somes in 10 of 14 recombinants (Middleton 1964). The disomic chromosomes were unstable as indicated by the recovery of different markers in several crosses of each of the 14 isolates to wild type tester strains. These results were interpreted to favor a mitotic mechanism of haploidization as described in the Parasexual Cycle. Recombinants were obtained from five prototrophic hyphal tips isolated from an aged culture of a heterokaryon of S. commune formed between compatible homokaryotic strains, each of which possessed a modifier mutation (thereby yielding the heterokaryon incapable of fruiting) (Raper and Raper 1964). Three were recombi- nant homokaryotic prototrophs and two were recombinant dikaryons. No evidence of aneuploidy was observed. Somatic recombination has been observed in the Uredinales (Watson 1957; Ellingboe 1961) and in the Ustilaginales (Holliday 1961) using spore color, pathogenicity or nutritional markers to detect recombinational events. When equal proportions of a urediospore l8 mixture of 2 isolates of Puccinia gaminis tritici, one having red spores and few genes for virulence, the other orange spores and many genes for virulence, were used to inoculate wheat seedlings, 4 virulent red races were recovered as a result of somatic recom- bination (Watson 1957). Fifteen recombinants were obtained from mixtures of 2 dikaryons of Puccinia graminis tritici when spore color and virulence were the selective techniques used to detect recombination in a subsequent study (Ellingboe 1961). Holliday (1961) studied induced mitotic crossing over in Ustila o maydis using diploid strains heterozygous for auxotrophic mutations. Two types of segregation were observed; crossing over and haploidization. Following irradiation with ultraviolet light, in- duced mitotic recombination was detected by the acquisition of aux- otrophy by previously prototrophic diploid cultures. That these auxotrophic recombinants were diploid was shown by subsequent segregation of other auxotrophic markers following a second treat- ment of UV. The results were best explained by a mechanism of mitotic crossing over and haploidization as described in the Para- sexual Cycle. MATERIALS AND METHODS SchinghLllum cultures: All cultures used in this study had a common background genome, strain 699 (Ellingboe and Raper 1962a, 1962b). The auxotrophic mutations and their linkage relations as determined from meiotic products, are given in Figure l. The sym- bols used are as follows: ade-l, ade-Z, ade-3 and _a_de_-_4 (unlinked adenine-requiring); m, m and 2&8 (unlinked arginine-re- quiring); 21_c_:2_ and M (unlinked nicotinic acid-requiring); SE-l, su-2 .... su-12 (recessive suppressors of arg-Z). Tester strains: A large number of tester strains which possessed a single auxotrophic mutation were synthesized by cross- ing selected auxotrophs with strain 699. Tester strains which pos- sessed two mutant markers were derived from crossing two compat- ible strains, each of which possessed a different mutation. The auxotrophic progeny from these crosses were subsequently tested for the mating-type factors they possessed. A number of prototrophic tester strains with different A and E factors were synthesized. These strains were established by crossing strain 699 with a number of other wild type strains that possessed different A and E factors. The mating-type factors of the progeny from these crosses were 19 20 Figure 1. Genetic map of Schizophyllum commune. Linkage re- lations adopted from Ellingboe and Raper (1962a) and Middleton (19 64). 21 A Cent. so 0‘ 16.3 B 28.5 x15 W B * u ra-l no.5 ode-3 ”.0 n ic-2 My] ode-2 25 org-2 I x11 col ode-l 17.5 m 33 (”9‘1 , ode-4 u org-6 — nic-3 22 determined by mating reactions with tester strains for which the A and E factors were known. An example of how the mating types of the progeny from the cross A41 B41 X A42 B42 are determined is given below: Testers A B C. D Expected genotypes sass at}. s_1 51183.1 a1 2:12 _Ajl _B_4__l F + B + ELI}. E32 F + + B £42 _B_4_l + F B + _A_4_2 E4_2 + F + B + = compatible reaction F flat reaction U3 ll barrage reaction A second series of prototrophic tester strains was synthe- sized to detect intra-é factor recombinants. The 5 factor is com- posed of two linked subunits, AOL and AB . From a cross of A410 1- 81 X A4201 3- B 5, the recombinant progeny Aa 3-8 1 and Au 1- B 5 are compatible with all four tester strains in the example used above. Progeny that scored as having recombinant A factors were mated to compatible stock tester strains known to possess A 013- 31 or Aal-B 5. The ”flat" reaction with one of these testers 23 established the genotype of each of the recombinant progeny. Once the intra-_A_ factor recombinants were identified they were mated to compatible stock cultures which possessed a E factor (B_47) which was different from all cultures used in this study, and recombinant progeny were saved for stock cultures. These cultures were of mating type Aal— 85 B47 or A 013- 81B47. Media: All matings were made on migration-complete medium (Snider and Raper 1958). Scoring for nutritional require- ments was made either on minimal medium (Raper and Miles 1958) or drop-out medium. Drop-out medium is minimal medium supple- mented with all but one of the growth factors required by the cultures being tested. The omitted growth factor is specified in the descrip- tion of the media; e. g. , arginine drop-out medium contains no argi- nine. All growth factors were supplemented at 10'4 M concentration. The heterokaryotic allelic tests were performed on minimal medium. Progeny from crosses were germinated on migration-complete medi- um, yeast medium or yeast medium supplemented with arginine. Yeast medium is made from minimal medium by substituting yeast extract and bacto peptone at 2 g/ liter for asparagine. All stock cultures were maintained on yeast medium in bottles at 40 C. Single spore isolation and determination o_f germination percentage: The progeny from all of the crosses were obtained by removing an agar plug bearing the mature fruiting body from the 24 established dikaryon and placing it on the inside of the cover of a petri dish containing migration-complete medium. When the cover was placed back on the petri dish, the fruiting body assumed an in- verted position over the agar in the dish. The spores abjected from the basidia were collected on the agar. The basidiospores were spread over the surface of the agar in a drop of sterile water with a small bent glass rod. The spores were allowed to germinate at 220 C for 20-30 hr. The percentage of germination was estimated from counts of a minimum of 100 spores in several fields of vision in a dissecting microscope with magnification of 48X. The well separated germlings of 20-30 hr were removed, together with a small agar block, with the aid of a sharpened isolating needle. Each germling was placed either in a stock bottle or in petri plates and incubated at 32° C until macroscopic growth was evident. Purification o_f cultures: A number of experiments in this study involved the isolation of prototrophic strains from sectors that arose in an auxotrophic culture. Inoculum from each prototrophic sector was transferred to fresh medium identical to that from which it was removed and incubated at 320 C for 2 days. With the aid of a dissecting microscope and an isolating needle, 3 to 5 hyphal tips consisting of 2-4 cells were removed from the growing edge of each culture. The hyphal tips were transferred to migration-complete medium and incubated at 320 C for two days. 25 Scoring £93 nutritional requirements: In crosses where a single auxotrophic mutation was segregating, a small agar block containing mycelium was transferred from each of the progeny to migration-complete and minimal media and incubated at 220 C for 3 days. In crosses where more than one gene was segregating for nutritional requirements, transfers were made to several types of drop-out media that would identify the growth factors required by each of the progeny. Scoring for nutritional requirements in homo- karyons on minimal or drop-out media was done at 3 days. Heterokaryotic allelic tests: The genotypes of progeny from crosses where more than one gene was segregating for a particular growth factor were inferred from heterokaryotic allelic tests. For + example, there could be three genotypes, ade-2 ade-4+, ade-2 ade-4, and ade-2 ade-4 which would require adenine among progeny of a cross involving a_cowonm moHDSSU 69$ was? .655 woodponm £023 >comonm .oZ ocflcwmnm .oZ HmuoH 3:3 pommono mcwmuum 6852068 388:8 co magnum 09$ 3?? N mcwmhm pommonmmaflm mo mommono 80.5 cacowoum «concomop ocficwmum mo >Ho>ooom .oH 3an 55 the fig locus, it did not score as a reverse mutation. The re- cessive nature of two of these 7 strains when scored in the hetero- karyotic allelic test is shown in Figure 2 B and C. All 7 of these prototrophs score similarly to strain gu_-_l in the heterokaryotic allelic tests. Therefore, either they possess a recessive suppressor or a mutation within the m locus which confers the wild type phenotype, but which is recessive to the mutant 33;? allele. The 19 arginine requiring progeny collected from the cross HA 41 (s_u_—_l) X 699 (wild type) were mated to a compatible a_rg;_2 tester strain. The newly synthesized dikaryons were plated on min- imal and migration-complete media. Failure of these dikaryons to grow on minimal medium was considered proof that the a_r_g_-2 muta- tion was recovered (Table 10). Growth responses of 9 of the 19 progeny on migration-complete and minimal media are shown in Figure 4 A-C. The 19 progeny are interesting because only 6 exhibit a non-leaky requirement for arginine in the heterokaryotic allelic tests whereas all 19 failed to grow on minimal medium as homokaryons. Heterokaryotic allelic tests performed with progeny, selected at random from the 19, are shown in Figure 4 D-F. A clear explanation for these differences in scoring is not available at this time. The recovery of arginine dependent progeny from crosses of suppressed strains induced with AR or NG with wild type strains, Figure 4. 56 Growth of arginine requiring progeny, derived from the cross s_u;l (HA 41) X 699 (wild type), as homokaryons and dikaryons with an a_rg_—_2 tester strain. A-C, Nine progeny growing on migration-complete (MC), top row, and minimal media (MM), bottom row. D-F, In each photograph, first petri dish shows growth of dikaryons derived from mating the two arginine requiring progeny shown in the second and third dishes with an a_rg-_2 tester strain. Top row, MC; bottom row, MM. The dikaryon formed between homokaryon in the middle dish and the 3.3;; tester is plated on the right side of the first petri dish in each photograph. The dikaryon formed with homokaryon of petri dish on far right and the gag-E tester is plated on the left side of first petri dish in each photograph. 58 as determined by heterokaryotic allelic tests, was not obtained (Table 11). Ten progeny from AR 6 X wild type exhibited a require- ment for arginine when scored as homokaryons at 3 days. However, growth was detected in 5-7 days as homokaryons and the gig-g muta- tion was not recovered in heterokaryotic allelic tests. Similar re- sults were obtained with one of the progeny from NC 18 X wild type and 3 progeny from NG 21 X wild type. Supersuppressibility tests with su-l and eight different auxotrophic mutations: The ability of su-l to suppress auxotrophy conferred by mutations other than _a_r_g_-_._2 was tested by examining progeny of crosses s_u-_l by eight different doubly auxotrophic strains. Each of the 8 doubly auxotrophic strains possessed the gig-_Z muta- tion plus one other auxotrophic marker. For example, progeny were obtained from a cross of su-l arg-Z ade-1+ X su-l+ arg-Z ade-l. The four genotypes expected are: su-l+ arg-Z ade-l+, su-l+ arg-Z ade-l, su-l arg-2 ade-l+ and su-l arg-2 ade-l. If su-l does not suppress ade-l, all four classes of progeny should be identifiable by plating on two media, one lacking arginine, the other lacking adenine. The last two classes should be indistinguishable on these media if su-l also suppresses ade-l. The progeny from crosses of su-l arg-2 with strains carrying the adenine or nicotinic acid mutations were scored on adenine or nicotinic acid drop-out media. The data show one recombinant class of individuals which has no requirement for 59 o a mo 72-53 m: oz o m 5; 27:3 3 oz 0 0 NS 875...; E 5. o on ma 3-83 8 m< mwoumou Nuwhm HE? mcormfip 0390.3 whoufldvoh >cowoum mohdfido 093 EC? -0030 poodponm £033 unnowona .oZ ocwcfiwnm .oZ HmuoH 0“ p088 magnum .83po8 38858 no magnum 09$ 2?». X mafimfim commonmngm mo mommono 80.3 lanowoam unopcomop ocflcwmnm mo >Ho>ooom .: 3an 60 arginine but possessed requirements for either adenine or nicotinic acid (Table 12). These data demonstrate that _s_1_1_-_l is incapable of suppressing auxotrophy resulting from these adenine or nicotinic acid mutations. All progeny from crosses of strain su-l arg-2 by the double auxotroph arg-Z arg-6 were tested for their ability to grow on mini- mal medium. Those progeny that displayed a requirement were subsequently mated to three tester strains which had the following genetic constitutions: A) arg-Z su-l arg-6+, B) arg-2 su-l+ arg-6+ and C) arg-2+ su-l+ arg—6 (Table 13 A). The recombinant progeny which possess only the 3.33:2 mutation should produce dikaryons with testers A and B which will not grow on minimal medium (Figure 5 A). Those progeny which possess only the 287—2 and £38 mutations should produce dikaryons with testers A, B and C which will not grow on minimal medium (Figure 5 B). Those progeny which possess Eli and the 9.5.33 and Egg-_(i mutations should produce dikaryons with testers B and C which will not grow..on minimal medium (Figure 5 C). Only those auxotrophic progeny which possess §_1_I_-_l, §£g_12 and a_rg_-_6 produce dikaryons with tester A that will grow on minimal medium (Figure 5 C and Table 13 A). Similar results were obtained when progeny were examined from crosses of strain s_u_—_1 by the double auxotroph 338i Egg-_l (Table 13 B). The three tester strains used in the heterokaryotic allelic tests with these progeny 61 .mumou oEoSm oflokwhmxououo: Eonw poodpop oguocoU .Tdm >3 Knuflflfimmoummflfi MOM poumou mcwoo. c0335; .m 3 nom : mm mm $me N-mum Tom Nuwum prom .: vm ON Twum mfmnm Tom Namnm mm NA 3 mN Muowc Numfim 7.9m Numnm 2 o om om $3: ~-m$ Tum ~-m$ am om om cm a mluwmm Ts... Mummum Hm Hm : om muopm Nuwum 7.9m Numhm wm ma om om Nnmpm Nnmnm Tom alumna“ ma 5N om om 70pm Numum Tom Nnmnm «N Tom anum + + Numum + $me + Tom $me lacowonnfiwo moguocoU 453.358 dmcoflflopm mco pom mnwum powwommom :03? mo some .mfimuum 02303834.. 3390p “swam at“? 2-5m anumv Tom mo mommono So: poflficog >Comonnm .NH ozmfi 62 .85..“me 38?wa so nugonw u + ”85358 382:8 co EBOHm on I u m . u + 7me 7.9m Nuwhm u u .. Twnm + Numfim + u u + + NnMHm 7me Nuwnm X Tum ~-m.~m .m Tmum + + + + Nuwhm + Tam N-wnm U m < s n + @umhm HuSm anam + - m- + + ~-m.S oumfim Numum X 75m $me .< 9&3 + + + + Néim + 73 $me 0 m < mafimfim Hmummb .mcwmuum 93mm”. 5?? mmmmono ”35.33% 025 80.3 >cmwonm “GmeQOv madfimnm wcwmmOHu Scum vm>whmv mcoknhmxfiu mo "33090 .mfi 33MB Figure 5. 63 Growth of dikaryons derived from crossing three different arginine dependent progeny from two crosses with three different testers. A-C. Progeny from the cross: arg-Z su-l arg-é+ X arg-Z su-l+ arg-6. In each set of plates, top row, tester A, arg-Z su-l arg-6+; bottom row, tester B, arg-Z su-l+ arg-6+; middle row, tester C, arg-Z+ su-l+ arg-6. D-F. Progeny from the cross: arg-Z su-l arg-l+ X arg-Z su-l+ arg-l. In each set of plates, top row, tester A, arg-Z su-l arg-1+; bottom row, tester B, arg-Z su-1+ arklfl middle row, tester C, ag-f’ su-l+ arg-l. For each set of plates, plate at left contains migration-complete medium; plate at right con- tains minimal medium . 64 65 were the same as those described above except that the tester strain possessing 123:1) was replaced with a tester strain carrying a_rg;1. Again the recessive nature of the suppressor and the three genotypic classes of progeny that exist among progeny exhibiting a requirement for arginine is evident (Figure 5 D-F and Table 13 B). Since the frequency with which the recombinant genotypes arg-Z su-l arg-6 and arg-Z su-l arg-l is high (30/88 and 30/90 respectively, Table 12), it is concluded that 12.-.1 does not suppress auxotrophy conferred by either the argi or a_rg-_6 mutations. Recovery o_f diploid strains from connon-AB heterokaryons: Four rapidly growing sectors were isolated from common-fl hetero- karyons, heteroallelic for 5 complementing auxotrophic mutations, growing on minimal medium. These strains resembled the homo- karyon in morphology, were prototrophic, and remained stable through repeated transfers to migration-complete and minimal media (Figure 6A-C). None of these strains has sectored or acquired a nutritional requirement. One presumptive diploid was mated with a haploid, allowed to fruit, and 200 germinated basidiospores were collected and plated onto individual petri plates. Growth from 140 germlings was macro- scopically visible within 14 days. Colonial growth of 13 germlings was detected only after one month of incubation at 220 C. Many of the original germlings developed colonies with abnormal morphology Figure 6. 66 Diploids of Schizophyllum commune. A. Fan-shaped diploid sector arising from the common-fl hetero- karyon on minimal medium. B. Diploid strain, D-l, on migration-complete medium and C. on minimal medium. D. Sectors arising from a presumptive aneuploid derived from the diploid X haploid cross. E. Fruiting bodies on a compatible diploid strain isolated as a single spore from the diploid X haploid CIOSS. 67 68 which eventually produced many sectors (Figure 6D). Many of the colonies which sectored were later shown to be aneuploids, disomic for some of the markers that were present in the common-AB heter- okaryon. Some germlings developed colonies which never sectored and resembled the homokaryon in morphology. Strains which scored in the initial heterokaryotic allelic tests as auxotrophic, were not considered auxotrophic if sectors were subsequently recovered which possessed the wild type allele for the mutation in question. In these cases the initial scoring was considered to be made on haploid segre- gants from strains which were originally disomic for the chromosome in question. All mutant markers present in the common-fl hetero- karyon were recovered among the progeny of the diploid X haploid cross. The expected values for triploid segregation assume that all products of meiosis are recovered among the progeny of the diploid X haploid cross and that each of the mutant markers should be ex- pressed in one-sixth of the progeny. Progeny exhibiting a nutritional requirement should be monosomic for the chromosome carrying that particular auxotrophic mutation. Segregation of auxotrophic mutations and mating-tyg factors from _a; diploid )_( haploid cross: The frequency of recovery of three mutations, ade-Z, arg-Z and arg-6, closely fit the frequency predict- ed for trisomic segregation, while two mutations, ade-4 and nic-Z, were recovered in excess (Table 14). 69 Table 14. The frequency of recovery of mutant markers in 153 progeny of the common-AB diploid X haploid. Expected Observed Differencez/expected Z dZ/e ade-Z 25.6 29 .5 + ade-Z 127.4 124 .1 .6 ade-4 25.6 44 13.2 + ade-4 127.4 109 2.7 15.9* axg-Z 25.6 24 .1 arg-z+ 127.4 129 .02 .12 arg-6 25.6 26 .006 arg-6+ 127.4 127 .001 .007 nig-Z 25.6 42 10.5 mic-2+ 127.4 111 2.1 12.6* * Significant deviation from expected at the 5% level. 70 The segregation of mating-type factors also shows a reasonably close fit to the frequency predicted for a diploid X haploid mating. The £4_2 and l_34_2 mating-type factors that were introduced via the haploid component were recovered in excess of the expected frequency whereas recovery of disomics A_41/£1§ and _Bfl/gfl was less than expected (Table 15). Eight intra-é factor recombinants were also detected among the progeny. Since the frequency of re- combinant 5 factors is extremely variable, (Raper, Baxter and Middleton 1958) no attempt was made to determine their frequency. Analysis of the segregation of the 3’} factors with the _I_3_ factors is given in Table 16. The results indicate trisomic segregation, with the exception that the number of individuals Ail} B_42 is greater than expected and individuals of mating type A41/A42 B41 is less than expected. Some progeny that were disomic for chromosomes carrying dissimilar é and £3 mating-type factors, i. e. , A41/A42 B41/B42, developed fruiting bodies (Figure 6 E). Basidiospores were collected from one culture and were analyzed for nutritional deficiencies. Viability was low (67%) but the results were compatible with two genes segregating for adenine dependence, two genes for arginine depend- ence, and one gene segregating for nicotinic acid dependence (Table 17). Recovery of four progeny that had no requirements substantiates the premise that this diploid was heterozygous for all markers. All 71 Table 15. The expected and observed frequencies of mating-type factors among progeny from a diploid X haploid cross based on trisomic segregation. % among Number among progeny Segregants progeny Expected Observed I. The 5 factor A41 33. 3 77 77 A41/A41 16.7 A41/A42 33.3 51 37 A42 16.7 25 31 II. The E factor B41 33. 3 77 72 B41/B41 16.7 B41/B42 33.3 51 46 B42 16.7 25 35 III. Recombinant A factor Ax):< ---- -- 8 Ax indicates an 1ntra-1_\ factor recombinant. 72 Table 16. Segregation of A and I; mating-type factors among progeny of the diploid X haploid cross. Mating types recovered Expected Observed $141241 38. 2 37 £11121} 12.5 16 A4_2 211 12.5 14 A42 B42 4 3 9 A41 B41/B42 25.5 24 A42 B41/B42 8. 5 8 A41/A42 B41 25. 5 l6 A41/A42 B42 8. 5 7 A41/A42 B41/B42 17.0 14 Az§fl* 5 .4224:- 3 Asa/w o Ax indicates an intra-A factor recombinant. 73 Table 17. Segregation for nutritional dependence among 67 progeny derived from an A41/A42 B41/B42 diploid. Nutritional No. expected No. observed requirement among progeny among progeny . >c< adenine 50 47 * arginine 50 49 . . . . ** n1cot1n1c ac1d 33. 5 41 Assum1ng segregation at two unlinked loc1. Assum1ng segregation of one gene. 74 markers present in the common-_A__B heterokaryon have been recover- ed in segregants of this compatible diploid, except for the ad_e:4_ mutation. Segregation of the A mating-type factors with auxotrophic markers is given in Table 18. The expected number of progeny of Ag genotype includes both those disomic A_41/_A_4_l and those mono- somic A41. The expected number of progeny of A42 is based on the recovery of only monosomics, since only one dose of £112 entered the cross. Results of the segregation of nutritional markers with g mating-type factors are presented in Table 19. The expected number of progeny with the £41 and 1342 mating-type factors was determined with the same method as used for the A factor in Table 18. An analysis of segregants isolated from a sectoring aneuploid, disomic for the A mating-type factor was used to determine linkage between the markers present in the diploid X haploid cross. Segre- gants from this strain possess only the _B_4_2 mating-type factor believed to be carried on a monosomic chromosome. Since the _l_3_4_2 mating-type factor went into the cross in the haploid parent, a cross- over between the centromere and _Bilg. plus proper alignment at metaphase II would be necessary to yield a disomic chromosome homozygous for _B_42. If the mechanism of recombination is similar to the Parasexual Cycle (Pontecorvo 1956), mitotic crossing over 75 Table 18. Segregation of A mating-type factors with auxotrophic markers among 153 progeny from the diploid X haploid mating. Genotype Expected Observed A41ade-2 17.0 18 A41 ade-4 17.0 22 A41 arg-Z 17.0 9 A41 arg-6 17.0 14 A41 nic-Z 17.0 15 A42 ade-Z 4. 3 8 A42 ade-4 4. 3 8 A42 arg-Z 4. 3 5 £42. a_r_g-_6 4. 3 2 A42 nic-Z 4. 3 5 76 Table 19. Segregation of E mating-type factors with auxotrophic markers among 153 progeny from the diploid X haploid mating. Genotype Expected Observed B41ade-2 17.0 13 B41 ade-4 17.0 20 B41 arg-Z 17.0 11 B41 arg-6 17.0 14 321.1. M 17.0 18 B42 ade-Z 4. 3 9 B42 ade-4 4. 3 9 B42 arg-Z 4. 3 6 B42 arg-6 4. 3 6 B42 nic-Z 4. 3 8 77 would be infrequent and haploidization would proceed via stages of aneuploidy recombining genes on nonhomologous chromosomes. The data from these segregants indicate that ade-Z, ade-4 and arg-Z were heterozygous in culture 144 (Table 20). Segregant 144A, A41 B42, is very likely monosomic for chromosomes carrying mating-type factors, but is apparently disomic for chromosomes carrying ade-Z, ade-4 and arg-Z since expression of these markers occurs in secondary sectors 144Al and l44A2. Segregant 144C, A42 B42, is very likely monosomic for chromosomes carrying the mating-type factors and chromosomes carrying ade-4, arg-6 and nic-Z, but disomic for chromosomes carrying ade-2 and arg-Z since the latter two mutant markers are expressed in 144 C1, a secondary segregant. All seg- regants possessed the arg-6 and nic-Z markers. Synthesis o_f multiply auxotrophic strains: For a study of somatic recombination in common-fl diploid strains of §_. commune, there was a need for a large number of homokaryotic strains with different mating-type factors and auxotrophic mutations. Various combinations of these strains were used to synthesize common-Al?) heterokaryons that were heteroallelic for a number of different, complementing auxotrophic mutations. A systematic series of crosses was made which ultimately resulted in two groups of multiply mutant, auxotrophic, homokaryotic strains that possessed different mating-type factors. The auxotrophic mutations present in each 78 Table 20. Recovery of mutations present in segregants of an aneuploid derived from the diploid X haploid cross. Mutations recovered in segregants Segregant Mating type ade-Z ade—4 arg-Z arg’-6 nic-2 144A _A_flgfl yes yes l44A1 £14121} yes yes yes 144A2 fl_B_4_2 yes yes yes yes yes 144B fig} Egg yes yes yes yes 144C 1334—2 §_4_§ yes yes yes 144Cl £12 _B_4_2 yes yes yes yes yes 144D A42 §_4_2 yes yes yes yes yes 144E 131:2 B42 yes yes yes yes yes 144F A42 B42 yes yes yes yes yes 79 group were unique to that group except that the _a_rg_-_2 mutation was present in all strains of both groups and the recessive suppressor, s21, was present in some strains of both groups. The crosses were designed so that a minimum number of auxotrophic mutations were introduced into each of the crosses. This method enabled the detection of morphological changes which may have occurred upon introducing two different mutations into one strain. A second advantage was that the genotypes of the auxotrophic progeny from many of the crosses could be determined on drop-out media and did not necessitate the use of heterokaryotic allelic tests. Four strains, each of which carried the a_rg-_2 mutation and one other auxotrophic mutation were first mated with a strain which possessed the recessive suppressor, ELL—_l, and a_rg-_2 (Table 21). The recombinant progeny in the first three crosses were identified on arginine drop-out medium and medium lacking the second growth factor, e. g. , in the first cross, adenine. Recombinant progeny that had no requirement for arginine but possessed a requirement for the second growth factor were transferred to stock bottles for subsequent experiments. The genotype of the progeny from the cross involving 313:9 did require the use of heterokaryotic allelic tests. Those progeny that displayed a requirement for arginine were subsequently mated to three tester strains of the following constitutions: 80 Table 21. Recombinant progeny derived from crossing strains possessing two auxotrophic mutations with a sup- pressed strain, arg-Z su-l. Desired recom- No. recombinants Cross binant genotype total progeny arg-Z su-l + X arg-Z su-l ads-3 21/85 arg-Z + ade-3 arg-Z su-l + X arg-Z su-l nic-3 22/78 arg-Z + nic—3 arg-Z su-l + X arg-Z su-l ade-4 29/105 arg-Z + ade-4 arg-Z su-l + X arg-Z su-l arg-6 30/92 arg-2 + arg-6 arg-2 su-l + X arg-Z su-l ade-l 15/92 arg-Z + ade-l arg-Z su-l + X arg-Z su-l nic-Z 19/84 arg-Z + nic-2 arg-2 su-l + X arg-Z su-l ade-2 24/92 arg-Z + ade-Z arg-2 su-l + X arg-Z su-l arg-l 30/91 arg-Z + arg-l 81 A) arg-Z su-l arg-6+, B) arg-2 su-l+ arg-6+, and C) arg-Z+ su-l+ 25.3.1” Those progeny which possessed a_rg_-_2, s_u-_l and m produced dikaryons with tester A that would grow on minimal medium but dikaryons with testers B and C would not grow on minimal medium (Figure 5 C). The second group of multiply auxotrophic homokaryons was synthesized using the same procedure. The initial matings (crosses 5-8) are given in Table 21. Heterokaryotic allelic tests were per- formed on all arginine dependent progeny derived from the cross where a_rg_—_l was present. The progeny were mated to the following three tester strains: A) arg-Z su-l arg-l+, B) arg-Z su—l+ arg-l+ and C) arg-Z+ su-l+ arg-l. Only those progeny which were arg-2 su-l arg—l produced dikaryons with tester A that would grow on minimal medium (Figure 5 F). The next four crosses made between the 8 newly synthesized strains are given in Table 22. The procedure eliminated the neces- sity of using heterokaryotic allelic tests to distinguish between strains carrying the M and £614 mutations of the first 2 crosses and the 1513:} and ESL-2.2 mutations of crosses 3 and 4. The recom- binant progeny in each cross were identified on adenine, nicotinic acid or arginine drop-out media. Arginine dependency among progeny from the second cross and the fourth cross resulted from the arg-6 and arg-l mutations respectively. The progeny of each 82 arg-Z 2. arg-Z arg-Z 3. arg—Z arg-Z 4. arg-2 arg-Z su-l +- nic-3 su-lade-4 + X" su-l + arg-6 su-lade—l + X' su-l + nic—Z su-lade-Z + X' su-l + arg—l Table 22. Recombinant progeny derived from crossing suppressed strains, each of which possessed a single different auxotrophic mutation. Desired recombinant No. recomb. Cross genotype total L arg-2 su-lade-3 +- X' arg-Z su-lade-3rfic-3 30/108 arg-Z su-lade-4 arg-6 13/86 arg-2 su-lade-lrfic-Z 20/98 arg-Z su-lade-Z arg-l 9/71 83 cross possessedaigi and _s_u_:_l. The cross made between recombi- nant progeny derived from crosses l and 2 in Table 22 is shown in Table 23A. Because the arg-Z mutation was suppressed by 114;) in all of the progeny, any arginine requirement was attributed to the 11.23.28 mutation. The strains that possessed a requirement for adenine, nicotinic acid and arginine were mated to two adenine- requiring testers; one that possessed the gig-_3 mutation and one that carried the 3M mutation. The strains which failed to grow as dikaryons on minimal medium with both of these testers possessed the £2 and a_d_e-_4 mutations. The multiply auxotrophic homokaryons which comprised the second group were derived from crossing the recombinants of crosses 3 and 4 in Table 22 and are presented in Table 23 B. Heterokaryotic allelic tests were performed on all progeny of each group to determine the mating-type factors of each. A similar series of crosses was performed to yield strains which possessed the auxotrophic mutations of each group; however, none possessed the suppressor. Therefore, common-fl—B matings between homokaryons from the different groups were heteroallelic for all auxotrophic mutations except gig-_Z which was always homo- allelic. The suppressor, s_u-_l, in these matings was either homo- allelic or heteroallelic depending on the cross. Verification o_f diploid strains which mssess su-l: To circumvent the laborious task of demonstrating trisomic segregation 84 wmimfl Twnm N600 N130 + Tam Mulmm wmi: Twas + Nuofic 7000 75m ~7me mg; + Nnmpm N13: 7000 Tom Numum 7me Nuopm + + Tam Nuwnm wmim 7me Numpm N10“: H-000 Tam Nuwnw X + + N103 Tova Tam Numnm .m 2:? 9me T006 m6? + 73 7me mon oumfiw + mic? m10pmH15m Numpm moi: + 0-000 m6? mumpm Tom Nuwhm cumum $1060 + + 7.90 Numnm Sim 63mg 4-666 m6? M606 73 7me x + + mtow: Mumpm Tam N1wnm .< HmuoH momtfioch mmOHO m000038000m 00003800me pmfimmm 0:03.358 039030030 000.3520 0&6. vommommom :03? m0 £0.00 .mcflmfim pommmunadm mcwmmono 803 “003.30 >00wonm “cacao—8000M .mN 030B 85 each time a putative diploid strain was isolated, two criteria were adopted as evidence for the presence of diploidy. Strains that were presumed to be diploid were plated onto arginine, adenine and nicotinic acid drop-out media and minimal medium supplemented with all growth factors. Strains which were prototrophic, except that they grew very slowly on arginine drop-out media, were con- sidered to be diploid. Strains that were subsequently used in the study of somatic recombination were mated to a compatible wild type strain. Spores were collected from a single fruiting body that de- veloped on the haploid side of the mating, germinated on yeast me- dium supplemented with arginine, and the viable germlings were plated to drop-out media, where auxotrophic requirements were determined. The mutations conferring auxotrophy in the progeny were inferred from heterokaryotic allelic tests. The recovery of all of the mutations present in the common-fl heterokaryon among the progeny of a cross between the putative diploid and a haploid wild type strain was considered evidence that the one parent was diploid and that the diploid was heterozygous for all auxotrophic mutations. The recovery of auxotrophic progeny derived from two diploid X haploid crosses is given in Table 24. All mutant markers present in each common-AB heterokaryon from which these diploid strains were derived were recovered among the progeny of each cross. Somatic recombination i_n common-AB diploids: One diploid 86 a ma ..... NH NH 0H 0H HH ..... SN X hNuQ moox 0-0 Muofic N130 01wnm N-wnm 7me 0.000 Mu00m N100m 700m ”0ommommom £033 >Com0hm mo HonESZ .mommono 033.0: N 03230 803 003.80 tncomonm of S.“ “Cowman 00033.98 00.303830 m0 >H0>000m .0m 3an 87 strain, D-9, provided most of the recombinants that were analyzed during this study. D-9 produced a mycelium which was very sparse on arginine drop-out medium. Recombinants were derived from dense, white sectors which were conspicuous within 10-20 days after the plates were inoculated (Figure 7). Inocula obtained from these sectors were plated to arginine drop-out medium and after 48 hr growth at 320 C, hyphal tips were isolated. The cultures derived from the hyphal tip isolations were plated onto adenine, arginine and nicotinic acid drop-out media and to minimal medium supple- mented with all growth factors. Cultures that possessed nutritional requirements were mated to appropriate auxotrophic testers, and the auxotrophic mutations were inferred from heterokaryotic allelic tests. Cultures that exhibited no nutritional requirements were transferred to either migration-complete or yeast medium and examined periodically for sectors. Isolation and characterization 9_f recombinants derived from common-AB diploids: The results from three separate experiments with D-9 are given in Table 25. The genetic constitution of D-9 with established linkage groups is also given. Recombinant progeny have been placed in three separate classes based on their state of ploidy. The first class is comprised of 129 recombinants which in all respects appear to be haploid. All of these individuals possessed the nic-2 mutation. None of the 88 I I liol .mcflma 00:0 m>m0 HN 0020300 .QuO .mcfimHQ H030 0..»00 2 0000300 .m-< 0.80000 03:? .00000 80.3 000.203 0H0? 0000038000m #03008 050-4500 002$me 00 .ouQ 081:0 mm N032. mo\om 2.2m maibm NOCO N0\o ss\o mo\o + m-666 +m-602 H-mhm.v-6sm_~-6utm-666.+~-6060-sm N-mgm +. "0030000004 m-0w0 +7900 0100.0 N108 +m-00.0 +Nu000 700 an00 Mu0w0 Twum 0-00.0 N108 mu000 N1000 H100 Numn0 + + + + m-08 Twhm 01000 N108 mn000 N1000 700 Numnm + + + + "60600000 0000 083008 00800.0 008300 038.00 H0005 \ 000.3000m 00000 03020 030%0000000000 80.5 00.230“ 0000038000.“ mo 0930000 000.30 093 033 .0 0:? “00058000.” 00300000 000 00.0 8000.0.“ 00 0000300 00000380000 00000000090 000300 m0000000 80.3 003000 >00monn~ 000 00 00030008 00.30.3330 m0 003.0w00w0m .oN 03.08 93 mated to a compatible wild type strain and progeny were collected from a single fruiting body. The observed number of nicotinic acid- requiring progeny (19/102) was compatible with the expected number for trisomic segregation (17/102) assuming only one dose of M entered the cross. Segregation of the 53132.3 mutation was confounded with the segregation of ad_e:_4. There are two possible genotypes for the 51532;} mutation on a disomic chromosome. If ad_e_-_3 were heterozygous, a mating between this recombinant and a wild type strain, where only ade-3, ade-4 and nic—Z mutations are depicted is given below: ade-3 + ade-4 + nic-Z X' + + + The expected number of adenine-requiring progeny would be 59/102. If ade—3 were homozygous and disomic, two doses of ade-3 and one dose of nic-Z would enter the cross as indicated below: ade-3 + ade-4 ade-3 nic-Z X + + + The expected number of adenine-requiring progeny would be 94 76. 5/102. The number of adenine-requiring progeny recovered was 75/102. A mitotic crossover between £12} and n_ic-_2 would be required to yield a disomic homozygous for 3513;3’: since $2.3. and r_.i_c_-_2 were in repulsion in the D-9 diploid. If the frequency of cross- ing over in triploids of _S_. commune is reduced, as is the case in Drosophila, (Bridges and Anderson 1925; Redfield 1930, 1932), the mating between the aneuploid homozygous for a_cl§-_3 and a wild type strain should yield progeny that always have the adenine requirement, conferred by a_de_—3, when the nicotinic acid requirement is expressed. However, if £22 were heterozygous and disomic, 8. 5/102 progeny would be expected to have a nicotinic acid requirement in the ab- sence of an adenine requirement. The observed number of progeny which possessed only a nicotinic acid requirement was 8. These data are compatible with £132 being heterozygous and disomic even though the number of adenine-requiring progeny (75/102) was higher than expected (59. 5/102, Table 26). The third group of recombinants was also selected on the ability to grow normally in the absence of arginine (Table 25). None exhibited requirements for adenine or nicotinic acid. These strains appeared to be homozygous for s_u;_l and Egg-_Z but heterozygous for the remaining auxotrophic mutations. These strains were plated onto yeast medium where some sectoring was observed. Segregants of each strain were tested for nutritional requirements on drop-out 95 media and auxotrophic mutations were inferred from heterokaryotic allelic tests. Two of the 12 strains of this recombinant group sectored and an analysis of the segregation of biochemical mutations is given in Table 27. The id_e_—_3 and a_rg_-_l mutations were not recovered among secondary segregants of recombinant 128. Segregant 128f is the only individual that possesses the file—12 mutation and the 31%;? mutation in the absence of fly}. This would suggest that 128 was not homozygous for _s_u_-l or that nuclei still heterozygous for Ewere transferred with the nuclei homozygous for sud. in the original trans- fer to yeast medium. The segregation of auxotrophic mutations in the progeny of matings between 128e and 128f and a wild type strain reaffirmed that these recombinants are haploid (Table 28). Segregants obtained from recombinant 194 possessed only the pig—_Z mutation (Table 27). Recombinants were also recovered from diploid D-9, following 10, 20 or 30 sec exposure to UV irradiation (Table 29). One recombinant genotype differed from those obtained from spon- taneous recombination. The suppressor was not prosent in this recombinant and this was the only recombinant isolated that possess- ed the flei mutation. Since 32122 and ELI were in repulsion, a crossover between 33;]. and a_d_e-_2 was required to allow them to segregate as a unit in any given nucleus. The results suggest that this recombinant, isolated from an arginine deficient medium, was 96 Table 27. Growth of primary and secondary segregants derived from the D-9 diploid. Test media: Growth on minimal medium of dikaryons Drop-out derived by mating the segregants with and fully auxotrophic testers. supple- mented Tester strains: a Segregant A _Ii C 1_3_ ade-2 ade-3 ade—4 arg-l arg-Z nic-2 nic-3 128 +b+ + + + + + + + + + 128a T + + + + + + 128b + + - + + - 128C + J! + + 128d + + - + + - 128e - + - + + + - + t - + 128f - — - 1r - + - + - — - 128g + + - + + + + + + - + 194 + + + + 194a + + - + - + 194b + + — + — + 194C + + - + - + a Test media: A = adenine drop-out; B = arginine drop-out; C = nicotinic acid drop—out; D = fully supplemented media. + = growth, - = no growth on the indicated medium. 97 woiow woiwh vozom Mao“: wuopm +7me Nuowc +m:op.m Nuopm +Hu5m Numum mwNH 5:5 32$ 1:0 +m-owc vuopm +7me Nuowc +Muopm +Nuopm 7.9m Nuwhm owNH Bow oflcfioowc oGMCmpm ocfifiwhm momma oSoZm ofiokwnmxonmuos 80.3 BQEMm HmuoH \ whougvom pmhnomaw mucmcworrcoooh mo onguocnwo .cwwfim mag» 3T5 .m at“? unmcflorficoomh oEmoflououm a 509m mucmwohwmm knumpsoomm mcwmmohu Eoym pmfihop isomonm ms“ cw mcofimusg oEmohoxdm mo aoflmwohmmm .mm 3an 98 muoflcvnmpd + + Muopm + 7.0m Nuwnm OH I v + + 7me Nuowc + Nuopm Tam Numam ”mucdcflnEooma 303:0 ofimonugonnw .HH H o o Muowc vuopm 7me Nuowc muopm Numpm Tum Numum + + + + E m w muofic vuopm Tmnm NnuE Mumpm Numpm 7.0m Numum + + + + m H m muowc vnopm +7me N503 +m-opm +NuopmH15m Numam "300538000." 3392* .H 00m om 00m om 00m 3 ”mo 0.35093 >0 @3028 320.903.8000“ mo .02 TOBY»? + + mécm + 72.. $3352}, + + 7me ~62 + N13 + $3252}. 0-0 .2205 94.8888 don—«gay: >3 so“? oufl £93m mo “00830.3 mag/020m mHouoom wEBOHm 3.3 80.3 pouo>ooon mucmcwnfiooom .oN 3nt 99 probably carried over in the original inoculum transferred from the rapidly growing sector. Hyphal tip isolation resulted in the purifi- cation of a recombinant nuclear type that would not be expected to be detected using these methods. The other two haploid genotypes were common among spontaneous recombinants, and displayed a pink color. The single recombinant that possessed the ad_e;2 as well as the _a_dgil mutation was white. The recombinants that exhibited dense growth on all drop- out media were assumed to be diploids, homozygous for 3112. This group consisted of 25 individuals (Table 29 II). These strains were maintained on yeast medium and examined periodically for segre- gants. Fifteen of the 25 strains sectored on yeast medium (Table 30). A total of 27 sectors analyzed for nutritional requirements on drop- out medium exhibited a requirement for nicotinic acid. Hetero- karyotic allelic tests indicated that 26 possessed only the _n_ic_—2 mutation, one sector was a double mutant, having n_1_c;2 and ni_c_-_3, but none of the sectors possessed only the n_i_c_-_3 mutation (Table 30). The appearance of colored sectors in the common-A_B diploid culture on yeast medium provided another method for the detection of recombinational events. Only a limited number of recombinants were recovered and analyzed from a single diploid strain, D-25. Strain D-25 was assumed to be diploid and hetero- zygous for all auxotrophic mutations since it was repeatedly 100 o o m m w 00m om o 0 ma 3 m 00m cm H o o w o 00m 0H muofl: Nuo8 $.08 Nuomc poazmcw ponouoom >D 0» muouomm was» 389838000.“ pomomuno mm? 803358 03500 803.358 ofimcfim mo .02 oEQoSououm mo .02 0-9 08:. "at“? mnouoom mo .02 .coflmwpmnfl >D :33 0-0 m0 8080mm: weak/020m @3303 who? “of whouoom oEQonugonm 05 80$ mpcmmonmom wcfihfldvoanpflom 083032 .0m 3an 101 transferred from the stock bottle to drop-out media. It possessed only a requirement for arginine. The recombinant sectors derived from D-25 are presented in Table 31. Since there was no selection against arginine-requir- ing recombinants, it should be possible to recover both the a_rg;2 and a_r_g;§ mutations. The second recombinant genotype listed in Table 31 must have arisen as the result of a crossover between _s_u_:_l and a_de;2 as only the _a_rg_-_2 mutation was recovered. The third recombinant nuclear type listed possessed the 22% mutation. 312-} and n_ic_-_2 went into the diploid in repulsion and it is considered significant that when Iail_e_-_3 was recovered, Mwas not. The fourth recombinant possessed the £8.73 requirement and was isolated from a sector of very restricted growth. 102 H enmuw muoflc 73541300 7me Nuowc mumpm Nnopm Tum Numnm + + + + + + + and loan .0 m -0 .m umhm -08 .no .0 :0 m udm umhm 3 o +m.+~pvp+fi +N.mp+NpHN H oumnm Mnowc 70pm vuopm Tmnm Nuowc muopm Nuopm 7.0m Nuwhm + + + + + + + + + nan -08 .0 m .0 m ‘uwnm -08 .0 m .0 m nSm umh 3 +0 m.+~pvp+fi N.+mp+NpHNm mucmcwficcooou 30 .OZ moguosmm “confinacooom ouwnm m-08 + vnopm + + muopd + .730 Nuwnm 31m Nv< + + 70pm + 7me Nnowc + Nrmpm + Numnm Sum Nv< 3-0 .2295 m<éoeeoo .fsvoum mmummm pofifiwsxo was» 8330>8 we: 30 mmmnm :3 .Ho mucuuom Mafia mm 853008 ammo.» 803 @3203 0.83 :03? .mN-Q 6303930 .mlflucoEvcoo a 803 put/Cop m8d038000n mdoocmucomm Am 03mm. DISCUSSION Ultraviolet light and chemical mutagens were employed in an intensive search for recessive suppressors in Schizophyllum commune. Of 764 prototrophic colonies obtained by treatment of 6 auxotrophic strains with UV, none possessed a recessive suppressor. If suppressors were present among these prototrophs, they were either partially dominant or dominant and, were of no value for detection of recombinational events in somatic cells. Twelve cultures possessing suppressors of the a_rg-_2 mutation were isolated following treatment of mycelial fragments with chemical mutagens. Eight strains were isolated following treatment with hydroxylamine (HA), two strains were isolated follow- ing treatment with nitrosoguanidine (NG) and two after treatment with acridine red (AR). No suppressors were obtained for loci other than alg:_2. The recovery of the 23$ mutation from one prototrophic strain induced with HA indicated that the mutation to prototrophy did not occur at the 33;; locus. The recovery of the a_rg-_2 mutation from the other eleven suppressors has not been accomplished although relatively small numbers of progeny have been tested. The mutations could have occurred within the 2333—2 103 104 locus in each of the eleven strains as a result of intragenic suppres- sion. However, dikaryons synthesized between these eleven proto- trophic strains and an auxotroph possessing arg:_2 failed to grow on minimal medium. The data suggest that if the mutations to proto- trophy occurred at the a_rg_-_2 locus, they are recessive to the a_rg-_2 allele or that prototrophy may have resulted from a recessive sup- pressor which is very closely linked to the £535.; locus. The two mutations which suppress auxotrophy conferred by a_rfl which were induced with either NO or AR appear to be differ- ent from those induced with HA. In heterokaryotic allelic tests on medium lacking arginine, comparisons were made between dikaryons that were heteroallelic for. the .suppressor but homoallelic for Egi and dikaryons that are homoallelic for both a_rg-_2 and the suppressor. Differences in growth rates were easily detected up to 4 days but were not discernible after 7-8 days. These suppressors may correspond to the semidominant suppressors reported by other investigators (Weglenski 1966; Gajewski and Litwinska 1968). In contrast, dikaryons homoallelic for a_rg-_2 but heteroallelic for the suppressors induced with HA are clearly distinguishable after several weeks on arginine-less medium from dikaryons homoallelic for the suppressor and gig-_Z. It is unclear how EFL} suppresses auxotrophy conferred by arg-Z. If su-l were analogous to amber suppressors in bacteria 105 (Sarabhai, Stretton, Brenner and Bolle 1964) or the super-suppressors in yeast (Hawthorne and Mortimer 1963) it may have been possible to suppress auxotrophy at other loci. No biochemical data are available which would indicate the type of mutation present within other auxotrophic loci in _S_. commune. It is entirely possible that none of these loci possess amber mutations. That mutations to prototrophy which map near to, or within, the a_rg—_2 mutation were induced with HA, NG and AR suggests that the a_r_g-_2 locus does not possess a nonsense mutation. Hydroxylamine appears to react specifically with cytosine producing one-way base transitions where- by the original guanine-cytosine base pair is replaced by an adenine- thymine base pair (Brown and Schell 1961; Freese, Bsutz-Freese, and Bautz 1961). In Neurospora, HA was shown to produce reversions only in strains which revert by base-pair substitution (Malling 1966). Reversion studies of amber and ochre mutations within the rII genes of bacteriophage T4 (Champe and Benzer 1962; Brenner, Stretton and Kaplan 1965) indicate that neither mutation can be induced to re- vert by HA. Acridine dyes appear to cause deletions or insertions of base-pairs in the DNA which result in frameshift mutations (Brammar, Berger, and Yanofsky 1967). These frameshift mutations have been postulated as a mechanism for intragenic suppression. The specific action of NC is thought to be a methylation of guanine which ultimately leads to mispairing and base substitution 106 (Singer, Fraenkel-Conrat, Greenberg and Michelson 1968). Because all three mutagens induce mutations which map at, or very close to, the a_rg_—_2 locus, they may act on the same mutated site. If the mutation to auxotrophy at the 353:2 locus were by the induction of an ochre or amber triplet, no transition of the type induced by HA would restore prototrophy. All the 230 prototrophs recovered following treatment with HA would have necessarily been suppressors (Table 8). A more plausible interpretation would be that both NG and HA are capable of causing base-pair substitutions within the a_rg;2_ locus which lead to prototrophy and that the mutation which had lead to auxotrophy was not a mutation to a nonsense codon. The results shown in Table 10 and Figure 6 are surprising. Only 6 of the 19 arginine-requiring progeny obtained from the cross HA 41 (_si-_l) X 699, failed to grow as dikaryons with an gig-_Z tester. These data suggest that 13 of these progeny carried a suppressor but the arginine requirement was poorly suppressed in the homo- karyotic state. Other examples of these differences in scoring were observed in strains induced with NO and AR (Table 11). Regardless of how ELI suppresses auxotrophy conferred by £35.23 it is ideally suited for experiments on somatic recombination. It is incapable of suppressing auxotrophy at 8 loci tested thus far and it maps within one of the few established linkage groups in S. commune. The technique used to obtain diploid strains was rewarding. 107 The experimental results clearly show that stable vegetative diploid strains of S. commune have been isolated from a common-_A_B heterokaryon. All mutant markers that are present in both com- ponents of the common-AB heterokaryon can be recovered from diploid strains (Table 14 and 24). The segregation of mating-type factors and nutritional markers among progeny of a diploid X haploid cross follow the predicted ratios of triploid segregation assuming recovery of all types of meiotic products. Two mutant markers, 53M and M (each of which was contributed by a different nucleus), were recovered with a frequency greater than expected by trisomic segregation (Table 14). It is conceivable that the diploid nucleus is not stable prior to the forma- tion of the fusion nucleus in the basidium, as reported in Coprinus 1a 0 us (Casselton 1965). The fusion of an aneuploid nucleus with the haploid nucleus prior to meiosis could account for the high fre- quency of recovery of M and 119;?“ Another possible explanation for the high frequencyof-recovery of 9.39:3 and M is that haploid- ization involving chromosomes with these markers occurred very soon after basidiospore germination, and that some strains originally disomic for certain markers were scored as haploids. That haploid- ization of some disomic chromosomes is occurring early is sub- stantiated by results obtained for the segregation of mating-type 108 factors. Although the observed values agree reasonably well with the expected for trisomic segregation (P= . 2-. 05), it can be seen that disomic A and }_3 factors occur less frequently than expected (Table 15 and 16). Another explanation would be that there is selec- tive pressure against individuals disomic for chromosomes possess- ing the M and n_iE_-_2 markers in the heterozygous condition, and that these individuals were among those non-viable germlings. Progeny from the diploid X haploid cross that have disomic chromosomes apparently undergo haploidization via stages of aneuploidy with reassociation of whole chromosomes, as in the Parasexual Cycle (Pontecorvo 1956). From a limited number of primary and secondary segregants, at least four linkage groups are shown to occur. Recovery of a_rg-_6 and E23 among all segre- gants of culture 144 indicates that these markers very probably are not on chromosomes known to be disomic, i. e. , chromosomes carrying the _A mating-type factors and chromosomes carrying mutant markers, ade-2, ade-4 and arg-Z. The genetic map of S. commune (Ellingboe and Raper 1962a) places Eli-_Z and 23:3 in the same linkage group approximately 25 cross-over units apart. The data obtained from segregants of culture 144 is consistant with this linkage arrangement. Mutant markers a_de;2 and a_rgfi, entered the diploid X haploid cross in the cis-arrangement and they segregated as a unit among segregants of culture 144 (Table 20). For culture 109 144, recombinationhad not occurred between a;g-_2_ and 513:} in meiosis. Segregation of age-_‘l was independent of ad_e-_2 and Egg-_Z and the A mating-type factors and is interpreted as belonging to another linkage group. It remains to be established whether M and/or _r_1_i_c_-_2 are linked to the B factor or whether they belong to separate linkage groups or to the same linkage group. The recovery of strains which were disomic and homozygous or heterozygous for mating-type factors, from the diploid X haploid mating, provides a way for obtaining commom-A, common-S or fully compatible diploids for a study of somatic recombination. The stability of these diploids is uncertain but at least eight strains which scored as compatible diploids have failed to fruit or sector. The common-AB diploids heterozygous for §_u_-l provided a method, analogous to that used in Aspergillus nidulans (Pontecorvo and Kafer 1956), for studying somatic recombination. The greatest number of spontaneous recombinants (129/154) obtained from D-9 were haploids (Table 25). None of the 129 haploid strains appear to have recombined genes via crossing over. The failure to recover Q_i_c_;2 and a_d_e__-_3 in equal frequency is not understood. The _n_i£_:_2 mutation which is in the same linkage group with 3512;} and in re- pulsion in D-9, was recovered in all of the 129 haploid recombinants. Since n_ic-_2 was in repulsion with s_u_-_1, their being in the same linkage group is excluded since segregation as a unit would require 110 crossing over in each of the 129 recombinants. It is conceivable that the high frequency of recovery of n_19_-_2 results from selective pressure against haploid strains which carry the a_c_l£_-_3 mutation. Since selection for recombination is based on detection of rapid growth, differential growth rates between haploids carrying a_de-_3 or _rl_'1_<_:-_2 may account for selection. There may be selective pressure for strains carrying the £212 marker. There was also a higher frequency of recovery of M in the diploid X haploid cross (Table 14). The recovery of 339;} in all of the somatic segregants is easier to explain. Linkage data obtained from fruiting bodies of common-_A__B heterokaryons and compatible matings (Middleton 1964) place M and gig—_l in the same linkage group, approximately 4 to 8 crossover units apart. Recombinants were recovered on an arginine drop-out medium which excludes those recombinants that possess an arginine requirement. Since a_r_g;1 and _a_<_i£-_4 were in repulsion, (barring crossing over between the markers, which could result in segregation of the wild type allele at each locus), all haploid strains should carry the ad_e-_:l mutation. None of these haploid recombinants show recombination between linked genes. These results suggest that haploidization proceeds via stages of aneuploidy, thereby recombining genes only on different chromosomes. The segregation of ade-3 and nic-2 in the progeny of a lll cross of a putative aneuploid X wild type strain was compatible with trisomic segregation. The recovery of 8 progeny with the 2i_c_-_2 mutation in the absence of an adenine requirement was compatible only with file—J and M being heterozygous and disomic. Further evidence for haploidization via stages of aneuploidy was observed in genotypes of secondary segregants derived from a prototrophic primary segregant of D-9 (Table 27). The recovery of the fiL-Z and M mutation apparently without s_u;1 indicates that although the original prototrophic segregant, 128, appeared to grow well on arginine drop—out medium, it may still have been hetero- zygous for §u_-l. Analysis of recombinants obtained following treatment with UV light revealed no increase in the incidence of crossing over (Table 29). One recombinant genotype was unique in that it was isolated from arginine drop-out medium but it did not possess _s_u_-1. Examination of the nicotinic acid-requiring segregants of prototrophic sectors isolated following UV treatment indicated strong selection pressure for the chromosome carrying Bic—'2 (Table 30). Experiments designed to select for recombinants on the basis of colored segregants provided a means whereby arginine- dependent segregants could be recovered. This is possible because pink color is present in haploid strains that carry a_de_-_4 in the absence of ade-2, and in diploids homozygous for ade-4 but 112 heterozygous for M. Thus, any recombinational event leading to either of these two situations is detectable on yeast medium. Although no biochemical data are available about the product that accumulates or the position of the block in $911 or ad_e__-_2 mutants, it appears that the ad_e_-_2 mutation affects an earlier step in the adenine biosynthetic pathway than 3.25:4. With this method, only 4 segregants were recovered and analyzed, a sample too small to draw definite conclusions. The a_rg-_6 mutation was recovered in 2 of the 4 cases. Modifications of this technique may provide an efficient way to obtain segregants. The limited data on somatic recombination in common-AB diploids indicate a parasexual mechanism. The techniques used would not have detected Specific Factor Transfer since the A and }_3 factors were similar. The methodology for detecting recombina- tional events in diploids is now available for the critical experiments that will test the role.of mating-type factors in somatic recombina- tional events. It should now be possible to synthesize common-A, common-B and compatible diploid strains for the purpose of examin- ing somatic recombination. In earlier experiments (Ellingboe and Raper 1962a; Ellingboe 1963), the origin of class I recombinants was explained by meiosis-like recombination within the dikaryon of the incompatible di-mon mating. Using a compatible diploid heterozygous for the 113 recessive suppressor, experiments can be conducted to determine whether the Parasexual Cycle, Specific Factor Transfer, or a meiosis-like mechanism of recombination are indeed the mechanisms by which genetic material is exchanged in somatic cells or if these mechanisms are simply a reflection of the technique used to detect recombination. SUMMARY Recessive suppressor mutations of the arg-Z locus have been isolated in Schizophyllum commune by treating mycelial frag- ments of an a_rg:2 strain with hydroxylamine, nitrosoguanidine or acridine red and selecting for prototrophs. Each mutation to pro- totrophy segregated as a single gene through two or three genera- tions of backcrossing to the gig-_Z parent. One suppressor, _s_\_1_:_l, maps outside the a£g_-2 locus and is incapable of suppressing aux- otrophy conferred by mutations at eight other loci. su-l is recessive in the dikaryon and common-_A_B diploid. Prototrophy in the remain- ing eleven strains may have resulted from intragenic suppression or from a mutation in a suppressor that is very closely linked to the arg-2 locus. If the suppression is intragenic, all are recessive to the a_rL-E allele. A technique was developed which permitted the recovery of stable vegetative diploid strains from common-A__B heterokaryons of S. commune. Common-A_B diploid strains heterozygous for auxo- trophic mutations are prototrophic and resemble the homokaryon in morphology. Those strains homozygous for arg-Z but heterozygous 114 115 for $1.11 and other auxotrophic mutations exhibit very slow growth on arginine drop-out medium. Segregation of five auxotrophic mutations and mating-type factors of a diploid X haploid cross closely fit the predicted values for triploid segregation. Segregation of mutant markers among somatic segregants of an aneuploid derived from the diploid X haploid cross indicated that at least four linkage groups are present in S. commune. The recessive suppressor, _s_u__-_l, was used to detect somatic recombination in common-A_B diploids of S. commune. Recombinants were recovered from dense fast-growing , sectors on arginine drop- out medium. The majority of recombinants analyzed in this study were haploid. Aneuploid and diploid strains were also recovered and analyzed. 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