.. Jun". 1 2: 1.. , A. n. ‘ . s . J twink...“ \ x. a. a?“ Luau"! .. 1...? n a .inut x 5.8.. .. n .i v; yKunu} $.28." to. . I; :3}: . vii .1 . .nnfi... . . I... >n..,...l.§ 3.. . 1.0.. iii? a. gin...» _ >3. .3. 9:557 93. Cd Bit/3% 3 E This is to certify that the thesis entitled FACTORS INFLUENCING HERPETOFAUNAL DIVERSITY ON DIFFERING LAND OWNERSHIP TYPES IN A HUMAN- DOMINATED LANDSCAPE presented by Tracy E. Grazia has been accepted towards fulfillment of the requirements for the Master of degree in Fisheries and Wildlife Science /. Majdl‘ Professdr’s Signature 8 / 7 /07 Date MSU is an afiinnaflveaction, equal-opportunity employer PLACE IN RETURN BOX to remove this checkout from your record. To AVOID FINES return on or before date due. MAY BE RECALLED with earlier due date if requested. DATE DUE DATE DUE DATE DUE 6/07 p:lClRC/Date0ue,indd-p.1 FACTORS INFLUENCING HERPETOFAUNAL DIVERSITY ON DIFFERING LAND OWNERSHIP TYPES IN A HUMAN-DOMINATED LANDSCAPE By Tracy E. Grazia A THESIS Submitted to Michigan State University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Department of Fisheries and Wildlife 2007 FACTO LN no! bcm tic. and fray?” mphiliiin til cycle. the} hi herpclufiuni in southcn .\ warships a! Ll'lldilil'lls ml iifiStTlilc hf." l detected 3 . l I‘ and Lint-“fl" ‘mli‘nanl in rages, . will; I 'lrp I it?" .. Jand and j I .m(.' 1 M in eff. ABSTRACT FACTORS INFLUENCING HERPETOFAUNAL DIVERSITY ON DIFFERING LAND OWNERSHIP TYPES IN A HUMAN-DOMINATED LANDSCAPE By Tracy E. Grazia In recent decades, much attention has focused on the global decline of herpetofauna] populations throughout the world. Although all causes of declines have not been clearly determined, anthropogenic habitat modification including habitat loss and fragmentation is the best-documented cause of herpetofauna] declines, particularly amphibian declines. Because herpetofauna use multiple distinct habitats during their life cycle, they have the potential to be affected by a variety of factors. I investigated herpetofauna] community dynamics on differing land ownership types (public vs. private) in southern Michigan from 2005-2006 to determine 1) if differences between land ownerships and between sample years existed, 2) if local habitat and environmental conditions influence herpetofauna, and 3) if landscape pattern metrics could be used to describe herpetofauna] communities. Differences between land ownership types were not detected. Soil associations and warmer temperatures were found to influence richness and diversity, and percent canopy cover and distance to the nearest water body were important in structuring herpetofauna] communities. Herpetofauna exhibited significant relationships with surrounding landscape attributes including a positive association with wetland and forest cover, and a negative association with agriculture. My results demonstrate that conservation strategies will need to consider factors at multiple spatial scales to effectively understand existing and future herpetofauna] populations. Fur. Rmurgcsl intmznm Rit‘ff. ~ rAl mm; :hmi lll‘l'iiimitlt‘ >l Rtilti-tl. lhcii md LCilL‘li} i." ““11 time. T EthU-m. (I; .14 ',l I A mu \V‘diiicf ACKNOWLEDGEMENTS Funding for this project was provided by the Michigan Department of Natural Resources (MDNR), Wildlife Division; Michigan State University; and the Safari Club International. 1 am indebted to my graduate committee members: Kelly Millenbah, Gary Roloff, and Jim Harding for their input throughout this project and for elevating my critical thinking skills. To my major advisor, Dr. Kelly Millenbah, thank you for your invaluable support, encouragement, and guidance throughout this project. To Dr. Gary Roloff, thank you for sharing your statistical knowledge throughout this project. To Jim Harding, thank you for sharing your invaluable herpetological knowledge throughout this project. I would like to give a special thanks to Dr. Dana Infante for all of her help with reviewing this lengthy document. The data collection could not have been completed without the valuable assistance of field technicians: David Dimitrie, Carolyn Gillen, Kile Kucher, Todd Thorn, and Leticia Villarreal who suffered through long days, poison ivy, and wood frog after wood frog. Thanks to everyone who helped install the drift fences and pitfall traps: Matt Einheuser, Geoffrey Grisdale, Susan Jones, and Fred Simmons and to the MSU Fisheries and Wildlife Club for construction of over one hundred fimnel traps. Thanks to Lila Boyko, Mark and Debra Carlson, Tom Cooley, Earl Flegler, Wayne Flood, Edward Gildner, Scott and Wendi Kribs, Gloria Miller, Tom and Brenda Reich, Bumell H. Selleck, PhD. (deceased) and Alice A. Selleck, Vernon and Sue iii Stephens, Charles and Mary VanLoan, Clifford and Margaret Welsch, Lisa Williams, Livingston Land Conservancy, Michigan Wildlife Conservancy, Southwest Michigan Land Conservancy, Woldumar Nature Center, and all of the other participating private land owners that allowed me access to their property. This project would not have been possible without their support and interest in the project. Special thanks to everyone who helped me locate private land owners willing to participate in this project. Much appreciation is owed to those that helped me see this project come to fruition. Other contributors to this project include: Bryan and Jordan Burroughs, Rebecca Christoffel, Jon Deroba, Ali Felix, Dr. Dan Hayes, Dan Linden, Krissy Wildman, MSU, Department of Fisheries and Wildlife; Peter Kurtz, MSU, Department of Geography; YuMan Lee, MNFI; Dr. Mike Lannoo, Laura Guderyhan, Ball State University; Dr. Kevin McGari gal, UMass; Amanda Hathaway, MUCC; MDNR, Wildlife Division; Sarah Panken, and Jeremy Smith. Also, special thanks to Jill Cruth, Julie Traver, and Mary Witchell for all of their help and patience. I would like to acknowledge all of the amazing women in the Millenbah lab: Lauren Bailey, Katie Kahl, Nikki Lamp, Nichole Rubeck-Schurtz, Trixi Smith, and Adria VanLoan. Without out your friendship, guidance, support, and words of encouragement, I would not have completed this project. You made the transition to graduate school enjoyable and I could not have done it without you. Thank you to Lauren and Adam for taking me in when I first arrived and making me feel welcome. Thank you to Katie and Jody for putting out the welcome mat and helping me through the writing process. I would also like to acknowledge Pamela Roy for her support and friendship. Thank you for keeping me sane during our year of statistics. To Heather Plant, Amy Jacobs, Marion iv Coopd. E: me MUS" pgfit’tiilli Lil l 3: career in n; 1 metal to r Haters pr Gix'erxmn. R .er Bcrcnh; encouragcm limit you ii- JOLITI‘I’CV. Cooper, Elena Sachs, Kathy Sullivan, Abi King, Trisha Crabill, thank you for supporting me through this journey. Thank you to Scott Hereford for encouraging me to reach my potential and to gain confidence in myself. I am indebted to my parents, Jack and Carolyn, for encouraging me to pursue a career in natural resources and for instilling in me an appreciation of nature. I am grateful to my husband, Brian Schaffler for his love, patience, and support throughout my Master’s program. To my brother, Todd, grandmother, Irene Methe, Janice and Rick Giverson, Rob and Karen Methe, and extended family, Bud and Edna Schafiler, Pam and Art Berenbaum, Rhonda Schafiler and John Wydra, I am forever grateful for your encouragement and support. To my grandmother, Grace Grazia and uncle, Gene Grazia, thank you for your love and support; I wish you could have been there for the whole journey. llSl OF TAB llSl OF FlGl CHAPTEI INTRODL'C Nt’t‘d for The Impu Nllt'lhgll‘l The Valu. Species C The Imp‘i (DALAXI STITDY A. UTERATI CHAPTER ST. INTRODI IETHOD~ Dnfi R. Clflcrb I Area TL." Amgmp “Mk-R. Data Ar. RESLIT: I Smile, ' Spck'l'cg Si—‘cht 3pm... Sl‘fllc. HCJ'Dc! TABLE OF CONTENTS LIST OF TABLES ............................................................................................................. ix LIST OF FIGURES ......................................................................................................... xxi CHAPTER 1: EVALUATION OF THE HERPETOFAUNAL DIVERSITY OF MICHIGAN’S STATE GAME AND WILDLIFE AREAS INTRODUCTION ........................................................................................................... 1 Need for Research ....................................................................................................... l The Importance of Herpetofauna as Biological Indicators ......................................... 3 Michigan’s State Game and Wildlife Areas ................................................................ 5 The Value of Private Land to Biodiversity Conservation ........................................... 8 Species Comparisons between Private and Public Land ........................................... 10 The Importance of Landscape Pattern Metrics on Herpetofauna .............................. 1] GOAL AND OBJECTIVES ......................................................................................... l4 STUDY AREA .............................................................................................................. 15 LITERATURE CITED ................................................................................................. 22 CHAPTER 2: DESCRIPTION OF THE HERPETOFAUNAL COMMUNITIES IN STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS INTRODUCTION ......................................................................................................... 29 METHODS ................................................................................................................... 32 Drift Fence Arrays ..................................................................................................... 32 Coverboards .............................................................................................................. 34 Area Time-Constrained Surveys ............................................................................... 35 Anuran Call Surveys ................................................................................................. 35 Mark-Recapture Techniques ..................................................................................... 37 Data Analysis ............................................................................................................ 40 RESULTS ..................................................................................................................... 42 Species Inventory ...................................................................................................... 42 Species Richness ....................................................................................................... 45 Species Frequency of Occurrence ............................................................................. 51 Species Abundance ................................................................................................... 56 Species Diversity ....................................................................................................... 70 Herpetofauna] Community Similarity ....................................................................... 72 DISCUSSION ............................................................................................................... 72 vi C 0111me (rampart: LITERATI APPENDI.‘ .IPPENDD APPENDIX APPENDIX CHAPTER MICHIGA.‘ IVTRODU \IETHODS Silt Strut} St Vt “mun Comparisons between Land Ownerships .................................................................. 78 Comparisons between Years ..................................................................................... 79 LITERATURE CITED ................................................................................................. 83 APPENDIX 2.1. ............................................................................................................ 90 APPENDIX 2.2. .......................................................................................................... 123 APPENDIX 2.3. .......................................................................................................... 126 APPENDIX 2.4. .......................................................................................................... 127 CHAPTER 3: COMPARISON OF THE HERPETOFAUNAL COMMUNITIES ON MICHIGAN ’8 STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS INTRODUCTION ....................................................................................................... 128 METHODS ................................................................................................................. 1 3 1 Site Stratification Variables .................................................................................... 131 Soil Associations ......................................................................................... l3 1 Vegetation Types ........................................................................................ 132 Herpetofauna ........................................................................................................... 1 32 Drifi Fence Arrays ....................................................................................... 132 Coverboards ................................................................................................ 136 Mark-Recapture Techniques ....................................................................... 138 Vegetation Variables ............................................................................................... 140 Ground Vegetation Percent Cover .............................................................. 140 Canopy Percent Cover and Composition .................................................... 141 Coarse Woody Debris ................................................................................. 141 Weather Variables ................................................................................................... 141 Precipitation ................................................................................................ 141 Temperature ................................................................................................ 142 Spatial Feature ......................................................................................................... 142 Proximity to Water Body ............................................................................ 142 Statistical Analyses ................................................................................................. 143 Mixed Model with Repeated Measures — Considering Weather Effects 143 Mixed model — Focus on All Variables (Across Sample Periods) .............. 144 Constrained Ordination ............................................................................... 145 RESULTS ................................................................................................................... 153 Mixed Model with Repeated Measures — Considering Weather Effects ................ 157 Amphibian Species Richness ...................................................................... 157 Herpetofaunal Species Richness ................................................................. 157 Herpetofaunal Species Diversity ................................................................. 166 Mixed model — Focus on All Variables (Across Sample Periods) .......................... 166 vii Ar Hc Hr Constraim DlSCL’SSlG LITERATE] CHAPTER INTRODLT METHODS DIIIT Fen; Emerita: AIC‘CI Timi Mark-Ru“ Landscap Statistical .\l Ci RESELTS _ Mixed M Amphibian Species Richness ...................................................................... 166 Herpetofaunal Species Richness ................................................................. 175 Herpetofaunal Species Diversity ................................................................. 175 Constrained Ordination ........................................................................................... 175 DISCUSSION ............................................................................................................. 197 LITERATURE CITED ............................................................................................... 205 CHAPTER 4: EVALUATION OF THE EFFECTS OF LANDSCAPE PATTERN METRICS ON HERPETOFAUNA INTRODUCTION ....................................................................................................... 21 1 METHODS ................................................................................................................. 214 Drift Fence Arrays ................................................................................................... 214 Coverboards ............................................................................................................ 216 Area Time-Constrained Surveys ............................................................................. 217 Mark-Recapture Techniques ................................................................................... 217 Landscape Analysis ................................................................................................. 219 Statistical Analysis .................................................................................................. 223 Mixed Model ............................................................................................... 223 Constrained Ordination ............................................................................... 224 RESULTS ................................................................................................................... 230 Mixed Model — 100 m Scale ................................................................................... 232 Amphibian Species Richness ...................................................................... 232 Herpetofaunal Species Richness ................................................................. 235 Herpetofaunal Species Diversity ................................................................. 235 Mixed Model - 200 m Scale ................................................................................... 242 Amphibian Species Richness ...................................................................... 242 Herpetofaunal Species Richness ................................................................. 242 Herpetofaunal Species Diversity ................................................................. 242 Mixed Model — 1000 m Scale ................................................................................. 248 Amphibian Species Richness ...................................................................... 248 Herpetofaunal Species Richness ................................................................. 253 Herpetofaunal Species Diversity ................................................................. 253 Constrained Ordination ........................................................................................... 253 DISCUSSION ............................................................................................................. 267 LITERATURE CITED ............................................................................................... 276 viii CHAPTER \ITC ll 10A) Table 1.]. \ Assc Nita Pcnir lat-ls 1.2. S (STA CORN Stud} 2005 STAT i151: 1.3.. it Praia Tabic 1.4. S” dii‘i‘t'i'r; 53mph CHAPTER 3: STATE ()3 \1 Tabltll D, [WWDH id'ld) I Tahiti? I7 in an- “\iiki-i. T, r Iibifi‘ 23' K, Pm Call Tibial, \i ii ind LIST OF TABLES CHAPTER 1: EVALUATION OF THE HERPETOFAUNAL DIVERSITY OF MICHIGAN’S STATE GAME AND WILDLIFE AREAS Table 1.1. Vegetation categories according to the Integrated Forest Monitoring, Assessment, and Prescription (IF MAP) system (Michigan Department of Natural Resources 2001b) used in study site selection in the southern Lower Peninsula of Michigan during the 2005 and 2006 field seasons .......................... 17 Table 1.2. Soil associations (and codes) according to US. General Soil Map (STATSGO) for Michigan data (Soil Survey Staff, Natural Resources Conservation Service, United States Department of Agriculture) used in study sites selection in the southern Lower Peninsula of Michigan during the 2005 and 2006 field seasons. Descriptions of the first three major STATSGO components are listed ........................................................................ 18 Table 1.3. Total hectares (acres) of study sites sampled in the southern Lower Peninsula of Michigan during the 2005 and 2006 field seasons .......................... 19 Table 1.4. Site information for 82 survey sites located on 8 different SGWA and 24 different private lands in the southern Lower Peninsula of Michigan sampled during the 2005 and 2006 field seasons ................................................. 2] CHAPTER 2: DESCRIPTION OF THE HERPETOFAUNAL COMMUNITIES IN STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS Table 2.1 . Dates drift fence arrays, pitfall traps, funnel traps and coverboards were opened in southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 ........................................................................... 33 Table 2.2. Five decay classes of the downed logs (US. Forest Service 2004) used in area time-constrained surveys in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 ...................... 36 Table 2.3. Survey periods for conducting frog call surveys in the southern Lower Peninsula of Michigan, using Michigan Department of Natural Resources call survey protocol (Sargent 2000). .................................................................... 38 Table 2.4. Windspeed classifications used to determine if frog call surveys should be conducted based on the Beaufort scale. Surveys were not conducted if windspeeds > 3 on the Beaufort scale (Berry et al. 1934) ................................... 39 ix In BIC Tibia“ l I I") Table 2.5. Species of amphibians and reptiles documented to occur in Lower Peninsula of Michigan, as well as in the study area. Species ranges were determined from Conant and Collins (1991) and Harding (1997). *Species were observed in the study areas in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys including incidental observations .......................................................................................................... 43 Table 2.6. Capture techniques and survey methods used to detect individual species in the southern Lower Peninsula of Michigan during the 2005 and 2006 field seasons .................................................................................................................. 46 Table 2.7. Overall herpetofaunal Species richness on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, fiinnel traps, and coverboards and area-time constrained survey including incidental observations .......................................................................................................... 48 Table 2.8. Mean (SE) herpetofaunal species richness of SGWA and private lands by month in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, fimnel traps, and coverboards and area-time constrained surveys ....................... 49 Table 2.9. Overall herpetofaunal species richness by year in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained survey including incidental observations ......................... 50 Table 2.10. List of herpetofaunal species captured and their combined capture abundance in the southern Lower Peninsula of Michigan in summer 2005 and 2006 from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 59 Table 2.11. Total herpetofaunal species captured and their monthly capture abundance in the southern Lower Peninsula of Michigan in summer 2005 and 2006 from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 60 Table 2.12. List of herpetofaunal species captured by year and their combined capture abundance in the southern Lower Peninsula of Michigan in summer 2005 and 2006 from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................. 64 Table 2.13. Species diversity indices in the southern Lower Peninsula of Michigan based on capture data from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................... 71 ‘ 1 Appendix - cap! Appendix 3 $334: and Appendix 3 sex) Zillif Appendix I and ; Slit! CHAPTER MICHIGAN Table 3.]. 5 (STA C003 Sm. 300i STA' Table 3.3. L Mun: Dt'pg Tibltij E OP'CT; lend: ”Die 3.4, I in {if iii, Spy, SQ?» Sur“ pifr. SUI. Appendix 2.1. Measurements (snout to vent length (SVL) and weight) of Anurans captured in the southern Lower Peninsula of Michigan in 2005 and 2006 .......... 90 Appendix 2.2. Measurements (snout to vent length (SVL) and weight of salamanders captured in the southern Lower Peninsula of Michigan in 2005 and 2006 ............................................................................................................... 123 Appendix 2.3. Measurements (snout to vent length (SVL), tail length, weight, and sex) of snakes captured in the southern Lower Peninsula of Michigan in 2005 and 2006 ...................................................................................................... 126 Appendix 2.4. Measurements (sex, carapace length, carapace width, plastron length and plastron width) of turtles captured in the southern Lower Peninsula of Michigan in 2005 and 2006 .................................................................................. 127 CHAPTER 3: COMPARISON OF THE HERPETOFAUNA COMMUNITIES IN MICHIGAN’S STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS Table 3.1. Soil associations (and codes) according to US. General Soil Map (STATSGO) for Michigan data (Soil Survey Staff, Natural Resources Conservation Service, United States Department of Agriculture) used in study sites selection in the southern Lower Peninsula of Michigan during the 2005 and 2006 field seasons. Descriptions of the first three major STATSGO components are listed ........................................................................ 133 Table 3.2. Landscape categories (and codes) according to the Integrated Forest Monitoring, Assessment, and Prescription (IF MAP) system (Michigan Department of Natural Resources 2001b) ............................................................ 134 Table 3.3. Dates drift fence arrays, pitfall traps, funnel traps and coverboards were opened in southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 ........................................................................... 137 Table 3.4. Five decay classes of the downed logs (US. Forest Service 2004) used in area time-constrained surveys in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 ...................... 139 Table 3.5. Names and mean standardized abundance (SE) of the 12 herpetofaunal species included in the constrained ordination analysis. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 146 xi Table 3.6. .\ soutl' sumr Inixc T351537. C (Toni on 8( sum pilfui SUDC lablc3.8. 51 south capiu C0\CT 0b>tr Table 3.9. Sr RHHEI capiur COICd obscn Table 3.10. 5 south taplu' COTCT ObScr liblm l. . mpg; Pmr REL: arm. ' Ta5163.12. “Ill Ian-i 300! fun: I 'r . “Ale 3.]: ”Nil P11» . Table 3.6. Mean (SE) and range of habitat and weather variables recorded in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 and used in model selection for repeated measures, mixed models, and constrained ordination ........................................................... 148 Table 3.7. Gradient lengths of the ordination axes from the Detrended Correspondence Analysis (DCA). Herpetofaunal community data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 151 Table 3.8. Species observed by land ownership on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained survey including incidental observations .......................................................................................................... 1 54 Table 3.9. Species observed by soil type on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained survey including incidental observations .......................................................................................................... 1 55 Table 3.10. Species observed by vegetation type on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained survey including incidental observations .......................................................................................................... 1 56 Table 3.11. AIC scores for 5 best amphibian species richness mixed modelsa with repeated measures on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................. 158 Table 3.12. Type 3 fixed effects for the amphibian species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................... 159 Table 3.13. Solution for random effects for the amphibian species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 xii and 31 funnel Table 3.14. .\ nudd in IIIC deCII UUp& Table 3.15. .-‘ Mill 1 Penin Tenee meat Table 3.16. ' mfldt‘ P11) i'. and I Turn Table 3,171 ”100'. P”); Table 3.18 mix. land 31 ll}. and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................... 160 Table 3.14. Mean comparisons by soil for the amphibian species richness mixed model with repeated measures. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ................................. 161 Table 3.15. AIC scores for 5 best herpetofaunal species richness mixed modelsa with repeated measures on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .............................................................................. 162 Table 3.16. Type 3 tests of fixed effects for herpetofaunal species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, fiJnnel traps, and coverboards and area-time constrained surveys ....................... 163 Table 3.17. Solution for random effects for herpetofaunal species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, fimnel traps, and coverboards and area-time constrained surveys ....................... 164 Table 3.18. Mean comparisons for soil types for herpetofaunal species richness mixed model with repeated measures. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................... 165 Table 3.19. AIC scores for 5 best herpetofaunal species diversity mixed models8 with repeated measures on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................. 167 Table 3.20. Type 3 tests of fixed effects for herpetofaunal species diversity mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................... 168 xiii Table 3.21. mud pm. and ‘ tuna Table 3.33. 50“ 5mm pitii sunc Table 3.33. 0.051 Penn: fence area: CCTPIU Ctll'r’r Table 3.35. 1 mode Penn It'llt‘c area-f Tfik326 min“. UL Petr Tim. area- Table 3.21 . Solution for random effects for herpetofaunal species diversity mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area—time constrained surveys ....................... 169 Table 3.22. AIC scores for 5 best amphibian species richness mixed models8 on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 170 Table 3.23. Type 3 fixed effects for amphibian species richness mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................. 171 Table 3.24. Solution for random effects for amphibian species richness mixed mode] (or = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 172 Table 3.25. Mean comparisons by soil for amphibian species richness mixed model. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................. 173 Table 3.26. Mean comparisons by vegetation for amphibian species richness mixed mode]. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................. 174 Table 3.27. AIC scores for 5 best herpetofaunal species richness mixed modelsa on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 176 Table 3.28. Type 3 Analysis of Variance for herpetofaunal species richness mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on xiv Table 3.311. mm Pen Tent am Table331. mix: Lou bid captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................... - 177 Table 3.29. Solution for random effects for herpetofaunal species richness mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 178 Table 3.30. Mean comparisons by soil for herpetofaunal species richness mixed mode]. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................. 179 Table 3.31. Mean comparisons by vegetation for herpetofaunal species richness mixed model. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................................................................... 180 Table 3.32. AIC scores for 5 best herpetofaunal species diversity mixed modelsa on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, fiinnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 181 Table 3.33. Type 3 analysis of variance for herpetofaunal species diversity mixed model (or = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, firnnel traps, and coverboards and area-time constrained surveys ................................................... 182 Table 3.34. Solution for random effects for herpetofaunal species diversity mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 183 Table 3.35. Mean comparisons by soil for herpetofaunal species diversity mixed model. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................. 184 XV Table 3.3-6. T331633: eacl and :1 III Tab1e3.3i\. \ m pm and CHAPTER METRICS Table-1.1. ] Tablet}. [ in ii bllcl Table-I3. I. DCpJ Table 44. .\l SPCCI SCI-‘3‘! 511m Pitt. SUP. , Table 3.36. Summary of the results of the constrained ordination explained by the environmental variables. Herpetofaunal community data and environmental data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. .............................................................. 185 Table 3.37. Summary of Monte Carlo permutation tests showing significance of each axis in the constrained ordination (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. ..................................................................................................... 187 Table 3.38. Summary of Monte Carlo permutation tests showing significance of variables in explanatory data set (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. .............................................................................................................. 188 CHAPTER 4: EVALUATION OF THE EFFECTS OF LANDSCAPE PATTERN METRICS ON HERPETOFAUNA Table 4.1. Dates drift fence arrays, pitfall traps, funnel traps and coverboards were opened in southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 ........................................................................... 215 Table 4.2. Five decay classes of the downed logs (US. Forest Service 2004) used in area time-constrained surveys in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 ...................... 218 Table 4.3. Landscape classes and IF MAP categories developed by Michigan Department of Natural Resources 1999-2001. ..................................................... 220 Table 4.4. Names and mean standardized abundance (SE) of the 12 herpetofaunal species included in the constrained ordination analysis. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 225 Table 4.5. Gradient lengths of the ordination axes fiom the Detrended Correspondence Analysis (DCA). Herpetofaunal community data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 228 Table 4.6. Summary of land cover types measured at the three spatial scales in the southern Lower Peninsula of Michigan in 2005 and 2006. All land cover xvi bees their 100 r PM“ Table 4.7. S the St It‘prL‘ V. 11161 dl>ldl read. each 1103K (SE1 TUTTI} Table 4.8. .1 in St; twp Cons! Table 4.9, I SPCei SCH SUT‘JT Pill} SUT‘N Tahlfi 4.11) 11.1.,» 1011 So. Slim . I Pitt. Sur. Ill" Ali. COL Cl 1"” Spy 31.1 types represented the total area (m2) within each AD. Values are means, their associated standard errors (SE) from all study sites in each data set: 100 m (N = 75); 200 m (N =55); 1000 m (N =25), and Prop. represents the proportion of the total AD area comprised by each land cover. .......................... 231 Table 4.7. Summary of landscape variables measured at the three spatial scales in the southern Lower Peninsula of Michigan in 2005 and 2006. Water depth represented the average of ground water depth (m) within each AD; surface water represented the distance from survey site (111) to nearest surface water; distance- road represented the distance from survey site (m) to the nearest road; road length represented the total length of roads (m) contained within each AD; distance-urban represented the distance from survey site (m) to the nearest urban area. Values are means and their associated standard errors (SE) from all study sites in each data set: 100 m (N = 75); 200 m (N =55); 1000 m (N =25) .................................................................................................... 233 Table 4.8. AIC scores for 5 best amphibian species richness mixed models8 at 100 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................................. 23 Table 4.9. Type 3 fixed effects and solution for random effects for amphibian species richness mixed model at 100 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, firnnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 236 Table 4.10. Correlations between landscape variables and amphibian richness, herpetofaunal species richness, and herpetofaunal species diversity at the 100 m scale using Pearson’s Correlation Coefficients. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, firnnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 237 Table 4.11. AIC scores for 5 best herpetofaunal species richness mixed modelsa at 100 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................................. 238 Table 4.12. Type 3 fixed effects and solution for random effects for herpetofaunal species richness mixed mode] at 100 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in xvii 51111111 pitfall sun e Table 4.13. 1‘ 1011 n \Iiehi coupl £01151: Table 4.14. l speeii 8011' 51111111". pitfall sun ej Table 415. . 111 SL1: 311.1". C(iupi C0115? Table 4.16. S .L... 8011 sum" piih sun Table 4.11 he» m M, and '- 31!.“ Ira; C01. Table 4. ] r, Spa; 8(1 summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, flannel traps, and coverboards and area-time constrained surveys .................................................................................................................. 239 Table 4.13. AIC scores for 5 best herpetofaunal species diversity mixed modelsa at 100 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .............................................................................................. 240 Table 4.14. Type 3 fixed effects and solution for random effects for herpetofaunal species diversity mixed model at 100 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 241 Table 4.15. AIC scores for 5 best amphibian species richness mixed models":1 at 200 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................................. 243 Table 4.16. Type 3 fixed effects and solution for random effects for amphibian species richness mixed model at 200 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 244 Table 4.17. Correlations between landscape variables and amphibian richness, herpetofauna species richness, and herpetofaunal species diversity at the 200 m scale using Pearson’s Correlation Coefficients. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............ 245 Table 4.18. AIC scores for 5 best herpetofaunal species richness mixed modelsa at 200 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .............................................................................................. 246 Table 4.19. Type 3 fixed effects and solution for random effects for herpetofaunal species richness mixed model at 200 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in xviii sumir. pitfall sunej. Tab1e4.30. 300 1‘.‘ Mich; I coup‘ Ctinslr Table 4.21. ' speci- SG\\ sumi‘. pill}. SUI) 1‘ Table 4.22, lIlI ll 0T M aria} Time Table 4.23, 3pm So " SUIT‘? pitt- ' .. I 5U“ Tibic 41; her? 111 So. 3UP. 1111:. SUP, Table 41: 111 Of “ C117” ’ 1117 1 Tel"burl 5p, summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 247 Table 4.20. AIC scores for 5 best herpetofaunal species diversity mixed models3 at 200 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. ............................................................................................. 249 Table 4.21. Type 3 fixed effects and solution for random effects for herpetofaunal species diversity mixed model at 200 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 250 Table 4.22. AIC scores for 5 best amphibian Species richness mixed modelsal at 1000 in scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area- time constrained surveys ...................................................................................... 251 Table 4.23. Type 3 fixed effects and solution for random effects for amphibian species richness mixed model at 1000 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, firnnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 252 Table 4.24. Correlations between landscape variables and amphibian richness, herpetofauna Species richness, and herpetofaunal species diversity at the 1000 m scale using Pearson’s Correlation Coefficients. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area—time constrained surveys .................................................................................................................. 254 Table 4.25. AIC scores for 5 best herpetofaunal species richness mixed models8 at 1000 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area- time constrained surveys. ..................................................................................... 255 Table 4.26. Type 3 fixed effects and solution for random effects for herpetofaunal species richness mixed model at 1000 m scale (or = 0.05). Data collected on xix SC SUI pit: SUI Table 4.3" Table 4.2%. Spt‘l 501 Table 4.39. cm SGT sum: Table 4.31). Sign} CUIIL blitl Table .13] . Slit Ebb. urb_ “ch 0113' (St. in i so; SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 256 Table 4.27. AIC scores for 5 best herpetofaunal species diversity mixed modelsa at 1000 m scale on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area- time constrained surveys. ..................................................................................... 257 Table 4.28. Type 3 fixed effects and solution for random effects for herpetofaunal species richness mixed model at 1000 in scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys .................................................................................................................. 258 Table 4.29. Summary of the results of the constrained ordination for herpetofaunal community data explained by the landscape variables. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 ........................................................................................ 259 Table 4.30. Summary of Monte Carlo permutation tests for landscape data showing significance of each axis in the constrained ordination (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 .................................................................... 261 Table 4.31. Summary of Monte Carlo permutation tests for landscape scale data showing significance of variables in explanatory data set (a = 0.05). Forest200 represented by the total area of forest (m2) in the 200 m AD; urban100 represented the total area of urban (m2) in the 100 m AD; wetland] 000 represented the total area of wetland (m2) in the 1000 m AD; ownership represented the land ownership where the survey site was located (SGWA vs. private); wetland200 represented the total area of wetland (m2) in the 200 m AD. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 ..................... 262 XX lnaees. in th CHAPTER 111C HIGAA Pig. 1.1. 10 of Region 1 represent pr. “a: located CHAPTER 1 STATE GA.‘ fig. 3.]. 01 south capta CUVL'I OTlSCI Fig 3.3. Fie Penir fence area- nunti mint: T6111: be 3.3. 11. LIST OF FIGURES Images in this thesis are presented in color. CHAPTER 1: EVALUATION OF THE HERPETOFAUNAL DIVERSITY OF MICHIGAN’S STATE GAME AND WILDLIFE AREAS Fig. 1.1. Location of study Sites in the Lansing sub-subsection of Ionia subsection of Region 1 ecoregion within Michigan’s Peninsula, 2005 and 2006. Nirmbers represent private land owners and SGWA surveyed in each county. One SGWA was located in 2 different counties ................................................................................... 20 CHAPTER 2: DESCRIPTION OF THE HERPETOFAUNAL COMMUNITIES IN STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS Fig. 2.1. Overall herpetofaunal Species occurrence in 82 sampling sites in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys including incidental observations .......................................................................................................... 52 Fig. 2.2. Frequency of herpetofaunal species occurrence in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. The top dashed line represents the maximum number of sites that species occurred; the bottom dashed line represents the minimum number of site that species occurred; and the straight line represents the mean number of sites that species occurred .................................. 53 Fig. 2.3. Herpetofaunal species occurrence on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on capture data from drift fence arrays, pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 54 Fig. 2.4. Herpetofaunal species occurrence by year in the southern Lower Peninsula of Michigan in summer 2005 and 2006-based on captures by drift fence arrays coupled with pitfall traps, firnnel traps, and coverboards and area-time constrained surveys including incidental observations ........................ 55 Fig. 2.5. Frequency of Anuran occurrence in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on frog call surveys ......................... 57 Fig. 2.6. Frequency of Anuran occurrence by year in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on frog call surveys ..................... 58 xxi Fig 3.7. T0 soutl capti Ct“ L’ Fig. 2.3. I.» south captu cm CT fig. 3.10. A‘ lamb 31111:" Fig. 2.7. Total captures of herpetofaunal species on SGWA by month in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on capture data from drift fence arrays, pitfall traps, funnel traps, and coverboards and area—time constrained surveys ................................................... 62 Fig. 2.8. Total captures of herpetofaunal species on private lands by month in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on capture data from drift fence arrays, pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 63 Fig. 2.9. Mean relative abundance of herpetofaunal species in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on capture data from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ................................................... 66 Fig. 2.10. Mean relative abundance of herpetofaunal species on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on capture data from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................... 67 Fig. 2.1 1. Mean relative abundance of herpetofaunal species by year in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on capture data from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ............................................ 68 Fig. 2.12. Frequency of species occurrence versus species mean abundance (standardized for trap effort) in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on capture data from drift fence arrays with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Species labeled are those with high frequencies of occurrence (>35) and high mean abundances (>0.5) with the exception of eastern tiger salamander and red-backed salamander, which occurred infrequently, but had high mean abundances ................................................................................... 69 CHAPTER 3: COMPARISON OF THE HERPETOFAUNAL COMMUNITIES IN MICHIGAN’S STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS Fig. 3.1. Joint plot of species and sample sites. Species shown in red letters and represented by codes (see Table 3.5) and Sites shown in black numbers. Species fall outside of sites indicating that a linear response model is appropriate. Herpetofaunal community data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................... 152 xxii Fig. 3.2. Con (500 T occur are re extent 10 the specie the er \anal ordin. CC'llxlI Fig. 3.2. Constrained ordination diagram (biplot). Species are represented by codes (see Table 3.5), the proximity of species in ordination space indicates occurrence in similar environmental conditions. Environmental variables are represented by vectors, which point toward rate of maximum change and extend in both directions. The length of the vector indicates its importance to the constrained ordination (ter Braak 1986). Perpendiculars drawn from species to vectors give the approximate ranking of that species response to the environmental variable and indicate the species optimum on that variable (ter Braak 1986) A smaller angle between the vector and the ordination axis indicates a greater relationship of the variable to the derived constrained ordination gradient (Grand and Mello 2004) .................................... 189 Fig. 3.3. Plot of eastern American toad abundance in a Generalized Additive Model (GAM) surface for distance to water (m) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates greater abundance .......................................... 190 Fig. 3.4. Plot of eastern American toad abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance .................................... 191 Fig. 3.5. Plot of wood frog abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance .................................... 192 Fig. 3.6. Plot of wood frog abundance in a Generalized Additive Model (GAM) surface for litter depth (cm) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance ................................................................ 193 Fig. 3.7. Plot of spring peeper abundance in a Generalized Additive Model (GAM) surface for leaf litter depth (cm) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance ................................................................ 194 Fig. 3.8. Plot of red-backed salamander abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance .................. 195 Fig. 3.9. Plot of green frog abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the xxiii T“. ([0 ‘1) H C HAPT .‘leTRll Fig. 4.1. r S a P 31 ft Fig. 42. re 51‘ Er southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance .................................... 196 Fig. 3.10. Percent of total variance in the herpetofaunal community data set in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys explained by habitat variables, site stratification variables, and weather variables, as well as variance explained by each combination of factors. Of the variation in the herpetofaunal community, 71.8% of the variance was left unexplained ............. 198 CHAPTER 4: EVALUATION OF THE EFFECTS OF LANDSCAPE PATTERN METRICS ON HERPETOFAUNA Fig. 4.]. Joint plot of species and sample sites. Species shown in red letters and represented by codes (see Table 4.4) and sites shown in black numbers. Species fall outside of Sites indicating that a linear response model is appropriate. Herpetofaunal community data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, firnnel traps, and coverboards and area-time constrained surveys ....................... 229 Fig. 4.2. Redundancy Analysis ordination diagram (biplot). Species are represented by codes (see Table 4.4), the proximity of species in ordination space indicates occurrence in similar environmental conditions. Environmental variables are represented by vectors, which point toward rate of maximum change and extend in both directions. The length of the vector indicates its importance to the constrained ordination (ter Braak 1986). Perpendiculars drawn from species to vectors give the approximate ranking of that species response to the environmental variable and indicate the species optimum on that variable (ter Braak 1986). A smaller angle between the vector and the ordination axis indicates a greater relationship of the variable to the derived constrained ordination gradient (Grand and Mello 2004). Forest200 represented by the total area of forest (m2) at a 200 m scale; urbanIOO represented the total area of urban (m2) at a 100 m scale; wetlandIOOO represented the total area of wetland (m2) at a 1000 m scale; ownership represented the land ownership where the survey site was located (SGWA vs. private); wetland200 represented the total area of wetland (m2) at a 200 In scale .................................................................................................... 263 Fig. 4.3. Plot of eastern American toad abundance in a Generalized Additive Model (GAM) surface for urban land class (m2) at a scale of 100 III. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance ............................................................................................................. 264 xxiv fig. 4.4. PIOI sudae SGW. summ abund. fig-1.5. Plt‘l surfue SG\V1 sunini abund 1g.ie Per expla “uhn “e0; exnh Lout by d: ands Fig. 4.4. Plot of spring peeper abundance in a Generalized Additive Model (GAM) surface for wetland land class (m2) at a scale of 1000 m. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance ............................................................................................................. 265 Fig. 4.5. Plot of wood frog abundance in a Generalized Additive Model (GAM) surface for forest land class (m2) at a scale of 200 m. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased Size of circles indicates increase in abundance ............................................................................................................. 266 Fig. 4.6. Percent of total variance in the herpetofaunal community data set explained by urban land class within 100m of survey site, wetland land class within 1000 m of the survey site, and scale200 (comprised of forest and wetland land classes within 200 m of survey sites), as well as variance explained by the combination of factors. Data collected in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys ....................................................................... 268 XXV (HAW Need for I Thr Stale dim 113 occurrfil at extensiVe “ Ill 1.116 SOUTT ditched and 31101). Alie ebnsen 3110 to set t. e fit lirgtim‘unur iDernpse} I the \Iiehig; Depanmer. manages ti Illusion is Wildlife r. CHAPTER 1: EVALUATION OF THE HERPETOFAUNAL DIVERSITY OF MICHIGAN ’8 STATE GAME AND WILDLIFE AREAS INTRODUCTION Need for Research The Michigan landscape has been transformed since the pioneers settled in the state during the early nineteenth century. The settlement of Michigan by Europeans occurred at a slower pace than other states to the south, possibly due in part to the extensive wetlands in southern Michigan. The pattern of human emigration and rich soils in the southern portion of the state resulted in forests being cleared and wetlands being ditched and tiled to make way for highly productive agricultural practices (Dempsey 2001). Michigan has a long history of resource conservation and enacted several conservation laws as early as 1859 to ban the netting of fish on inland waters, as well as to set the first closed hunting seasons for species such as white-tailed deer (Odocoileus virginianus), wild turkey (Meleagris gallopavo), and mallards (Anas platyrhynchos) (Dempsey 2001). In 1921, the Department of Conservation was established, and in 1968, the Michigan Department of Natural Resources (MDNR) was created (Michigan Department of Natural Resources 2001 a). Currently, the Wildlife Division of MDNR manages the state’s wildlife resources and supporting habitat, and the mission of this division is to promote the enhancement, conservation, and restoration of the state’s wildlife resources and ecosystems (Michigan Department of Natural Resources 2004). In Michigan, state game and wildlife areas (SGWA) have been established and maintained to improve and restore wildlife populations and habitat. In accordance with MDNR’S mission, these areas are presumed to be essential components in the ainSm‘ai tall-13536 I acqulk‘d i with JIM applicant grateu‘idc Th. Midlife ha and ri’plllt“ apes Am histories tit and C then amphibian I lll'elx‘h ant- bnefsini tp \IIL ligan . \ Compan' $4 1 :' 13mm in, ‘ \. blniihm conservation of biological diversity throughout the state. Ecologically, SGWA are valuable because they are lands set aside specifically for wildlife. They were originally acquired from lands not suitable for farming in the southern portion of the state and policies provided for purchasing these lands required that they be larger tracts of minimally-developed lands with the potential for wildlife restoration (Gordinier 1960, Application for Federal Assistance for the Michigan Department of Natural Resources- Statewide Land Acquisition Grant October 16, 1998). The purpose of this study was to determine whether SGWA are providing unique wildlife habitat to the southern Michigan landscape. To answer this question, amphibians and reptiles were used as one indicator of biological diversity on differing land ownership types. Amphibians are potential environmental indicators because their complex life histories depend on both aquatic and terrestrial habitats (Vitt and Caldwell 1990, Stebbins and Cohen 1995, Alford and Richards 1999, Collins and Storfer 2003) and reductions in amphibian diversity and abundance have been shown to indicate ecosystem stress (Welsch and Olliver 1998). To help provide context for the research project, I provide a brief synopsis of 1) the role of herpetofauna as biological indicators, 2) background on Michigan’s SGWA 3) the value of private lands to biodiversity conservation, 4) comparisons of research done on private and public lands and 5) the effect of landscape pattern metrics on herpetofauna. These main topics influenced study design and hypothesis in my work. The Imports :Anipl AnpbduanS' Stebbins and 0411c“ and AMMde ehangesirirc lllt?)t\'l11bll : thhards 1111 lmmt‘brute Amp Illens 1 0“ 5 formal Eco dcIC‘C'llll‘iber ~. eIIC‘LT] 2‘ CITE \ w - mmmlut: for 5111111; L» abundance PH COM“ 1 “Wand- Stein . 1 I THE“, C . , ‘TIVSCnt The Importance of Herpetofauna as Biological Indicators Amphibians can be key indicators of environmental change for several reasons. Amphibians use aquatic and terrestrial habitats during their life cycles (McDiarmid 1994, Stebbins and Cohen 1995), their permeable skin allows for absorption of toxicants (Maxell and Hokit 1999) and water (Vitt and Caldwell 1990, Stebbins and Cohen 1995, Alford and Richards 1999, Collins and Storfer 2003), making them more susceptible to changes in temperature, rainfall, and environmental toxins (Alford and Richards 1999), they exhibit sensitivity to water chemistry during egg and larval development (Alford and Richards 1999), and they are an important trophic linkage (providing efficient transfer of invertebrate resources to higher-level organisms) (Stebbins and Cohen 1995). Amphibians are thought to play a critical role in ecosystem dynamics (Burton and Likens 1975, Perkins and Hunter 2006). They are the most abundant vertebrate in many forested ecosystems, playing a crucial role in structuring communities of forest floor decomposers (Burton and Likens 1975). Welsh and Ollivier (1998) demonstrated the effectiveness of using amphibians as indicators of ecosystem stress. They found that stream amphibian densities were considerably lower in streams impacted by sedimentation. Welsh and Droege (2001) promoted the use of Plethodontid salamanders for biodiversity monitoring of North American forests, claiming that changes in abundance correspond to several microsite conditions including leaf litter, soil moisture, pH, coarse woody debris, available burrows, and canopy cover. Plethodontid salamanders demonstrate site fidelity, low fecundity, hold relatively small territories and are long-lived; characteristics that make variations in salamander counts more likely to represent substantial environmental changes (Welsh and Droege 2001). Recent populations ha 311.111. Sex era. including the I Duellman 19" non-natixe Sp; illlfi'CllOuS d1. ultraxiolet B . climate than Cbeinical p .j CUIIITIS and \ the £31136 UT Pillltttin E (1' .-, i ,. ht USE Sc amp}, ll) 1 dr ‘r-L -., “Hi-III] S111; Recent reports of malformed amphibians and the global decline in amphibian populations have received considerable attention in the last decade (Kiesecker et al. 2001). Several factors have been attributed to the decline of amphibian populations including the loss, deterioration, and fragmentation of habitat (Blaustein et a1 1994, Duelhnan 1999, Blaustein and Kiesecker 2002), the introduction of and competition with non-native species (Blaustein and Kiesecker 2002, Kats and F errer 2003), emerging infectious diseases (Alford and Richards 1999, Reaser and Blaustein 2005), increased ultraviolet B (UV-B) radiation (Alford and Richards 1999, Kiesecker et al. 2001), global climate change (Alford and Richards 1999, Kiesecker et al. 2001), and the effects of chemical pollutants in the environment (Alford and Richards 1999, Duellman 1999, Collins and Storfer 2003). Complex interactions among multiple factors are most likely the cause of the global amphibian decline, which further complicates the issue of protecting amphibians (Blaustein and Kiesecker 2002). Although the causes of amphibian declines have not been clearly determined, habitat modification including habitat loss and fragmentation is the best-documented cause of amphibian declines (Alford and Richards 1999). Both habitat loss and habitat fragmentation are considered to be main causes of decline in the Midwest United States (Lannoo 1998). The loss and degradation of wetlands is a major threat to most amphibian species and directly impacts breeding (Houlahan and Findlay 2003). Species that use several, different habitats during varying parts of their life cycle such as amphibians may be particularly vulnerable to changes in the landscape such as habitat modification, fragmentation, and actual habitat loss (Regosin et al 2005). 011161 13 the climate or I maspheric pt Cornell 19.83. nt‘alit} ot'bi lanal defornii Alford and R: premature 111:? lAl'ford and b Amphibian e the atmospbL 1999), Dep €335 £11111 la." SEnergixtie; Pill 111:4 m blt’fah (1110 long effect 3'- ‘ . Other causes of decline have been more difficult to document such as changes in the climate or chemical pollutants in the environment. The effects of low pH fiom atmospheric pollution can impact amphibian populations (Pough 1979, Dunson and Connell 1982, Cummins 1989). For example, low pH levels have been linked to the mortality of both embryos and larvae causing incomplete absorption of the yolk plug, larval deformities, and development to cease prematurely (Pough 1979, Cummins 1989, Alford and Richards 1999). Sublethal effects of acidification include delayed or premature hatching of eggs, a reduction in larval body size, slower larval growth rates (Alford and Richards 1999), and reduction in larval swimming ability (Kutka 1994). Amphibian eggs and larvae are also susceptible to greater UV-B radiation resulting from the atmospheric pollution of chlorofluorocarbons (Alford and Richards 1999, Duellman 1999). Depletion of the stratospheric ozone has lead to greater exposure of amphibian eggs and larvae to UV-B radiation (Duellman 1999). UV-B radiation alone or synergistically with other agents such as pathogens can have detrimental effects, such as high egg mortality, in certain amphibian Species (e.g., see Kiesecker and Blaustein 1995). Metals and chemicals used in insecticides and herbicides have also been shown to have toxic effects on amphibians (Alford and Richards 1999, Metts et al. 2005). Michigan’s State Game and Wildlife Areas The Wildlife Division of MDNR was developed to conserve the State’s wildlife and its habitats. The current mission of this program is to: “enhance, restore, and conserve the State’s wildlife resources, natural communities, and ecosystems for the benefit of Michigan’s citizens, visitors, and future generations” (Michigan Department of Natural Resources 2004). Historically, the Division was called the Game Division lblichigan D native u‘ildll game specie: Ankney 1W disappearing and com em rapidly and r reduce over; H011e1'er. .1. reducing per; 21,104). Mitre filabllsl‘icd‘ ecolot'ica] P' (Michigan Department of Natural Resources 2004) and it focused on the reintroduction of native wildlife species such as wild turkey and the introduction of non-native wildlife game species such as ring-necked pheasant (Phasianus colchicus) (Burroughs 1946, Ankney 1988). Non-natives were being introduced to occupy available niches left by disappearing native wildlife that resulted from human encroachment, intensive logging, and conversion to agriculture. Some native and non-native wildlife populations expanded rapidly and exceeded the capacity of the existing habitat to support them. In an effort to reduce overabundance, population numbers were reduced to match the available habitat. However, as time passed, research demonstrated that management focus Shift from reducing populations to managing habitats (Michigan Department of Natural Resources 2004). More recently, efforts to conserve plants and non-game species have been established, with an emphasis on the importance of protecting critical landscapes and ecological processes as demonstrated by completion and implementation of the Michigan Wildlife Action Plan (Eagle et al. 2005) and the Biodiversity Conservation Planning Processes (Michigan Department of Natural Resources 2005). With passage of enabling legislation Michigan’s state game areas were established on September 29, 1939 (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant October 16, 1998). The Wildlife Aid in Restoration Act, commonly called the Pittman-Robertson Wildlife Restoration Act, provided state funds for management and restoration of wildlife. Funds fiom this act are made available through an excise tax on sporting arms and ammunition (University of New Mexico Center for Wildlife Law and R. S. Musgrave 1998). For the first time in history, funds were made available for wildlife projects, including acquisition and in FLINT-’3 pUICha: the Mid Ought"! (A 3CC ‘1Id \\ A3315?” .ACqUISl U e-intlict II and timbc federal A ACQUISIIIU and improvement of wildlife habitat, and many SGWA were created from lands purchased with funds generated by this act. For the most part, SGWA have been purchased and maintained with hunters’ money (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant October 16, 1998). State game and wildlife areas are managed “...to improve wildlife habitat in accord with established principles of wildlife management” (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant October 16, 1998). Outdoor recreation is allowed when uses do not conflict with the main objectives of wildlife restoration and hunting. Sharecrop farming and timber harvesting is also allowed if the result is a benefit to wildlife (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant October 16, 1998). The majority of SGWA are located in the southern half of the Lower Peninsula. Private and public lands are interspersed in this landscape making it difficult to manage SGWA because privately owned parcels contained within a SGWA (known as private in- holdings) are often densely developed, and this development places intensive pressure and use on the adjacent public lands (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant October 16, 1998). Private in-holdings generally resulted from the unwillingness of private owners to sell their land at the time the SGWA was established. MDNR still uses Pittman-Robertson funds to acquire additional lands, particularly private in-holdings that are of high priority as they become available (Michigan Department. determined configuratit often ITICSC purchased I Rest'iurecs-' contain resi ownership . retlueing rh AllCl‘ilgdn [ l0. 199M. Wired b} l1. dC‘CI'EflSeg L Regime“. The Valur Th. and the ex dl" @1511} ( de'SCTTliqj 4‘. _, _ leafs. II". t‘ IE ; d “J 3T1 6“ (2(1th Department of Natural Resources 2004). Priority rating for a desired in-holding is determined by the priority level of the associated SGWA based on size, ownership configuration, public access, and the potential for the habitat to support wildlife. Most often these priority in-holdings are not developed, although developed areas can be purchased (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant October 16, 1998). Private in-holdings can contain residences and the lands can be subdivided which directly conflicts with SGWA ownership objectives because a safety zone is required around public buildings thereby reducing the area available for hunting (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant October 16, 1998). Blocking ownership in SGWA by acquiring these in-holdings reduces threats posed by future development, increases wildlife habitat management flexibility, and decreases the costs associated with land administration (Michigan Department of Natural Resources 2004). The Value of Private Land to Biodiversity Conservation The rapid alteration of many natural habitats, the increase of human encroachment and the ever changing anthropogenic impacts on wildlife has led to efforts to biological diversity conservation. Biological diversity has many different definitions, but can be described as the variety of life and processes that occur at all levels including species diversity, genetic diversity, and community diversity (Primack 2004). In the past 150 years, the rate of anthropogenic alteration of ecosystems has increased dramatically and led to an unprecedented loss of species (Wilson 1988). Historically, efforts have focused on conserving public lands (Morrison and Humphrey 2001); however, biologists and rnanili-‘CI'S "C \l'alCOV‘e ( W pmfllt’ 133d: Pm: compllSlEg i comm 311m research h» and Humphl lmds has p." bier. dcx clu state emim~ suggtstcd ll" laid on net Wm‘d and SOtht’m h aCCf’Ull-lll‘.” Cl -: ”K'lwgzcal mules in managers now recognize the need to also conserve private lands. According to Bean and Wilcove (1997), “. . .most endangered species depend significantly on habitats found on private lands.” Private lands are the dominant form of land ownership in the United States, comprising approximately 60% of the total (Hilty and Merenlender 2003); however, conservation efforts have primarily focused on publicly held lands (Knight 1999). More research has been conducted on public lands, most likely due to easier access (Morrison and Humphrey 2001). Scientific knowledge gained from biodiversity research on public lands has provided input to federal and state land management agencies. Policies have been developed from this scientific input and these policies trickle down from federal to state entities, as well as to county level governments (Knight 1999). It has been suggested that private lands conservation has been avoided due to potential conflicts with land owner property rights (Knight 1999). In Michigan, 79% of the land base is privately owned and 29% publicly held (Michigan Department of Natural Resources 2000). In the southern half of Michigan’s Lower Peninsula, even less land is publicly owned, accounting for only 4% of the total. Conservation biologists managing for biological diversity have stated that biological diversity transcends land owner boundaries (Primack 2004). Biodiversity resides in a diverse landscape of private and public ownerships (Saterson et al. 2004). Landscapes are complex and dynamic and can be affected by activities on adjoining properties. Failure to include private land in studies may result in unrepresentative sampling, particularly at larger spatial scales (Hilty and Merenlender 2003). For example, in the state of Florida, only 9% of the land is publicly owned (Myers 2001). \ {Of ( CZ." on p1. Dam t Speci: done It resents M6762}: fixated 35min: inflate};- l'aluahlc O‘t'ntd la;- Morrison and Humphrey (2001) found the majority of breeding crested caracaras (Caracara cheriway) nested on privately owned land. Caracara nests were rarely found on publicly owned land, most of which was being managed as natural areas to support native plant and wildlife communities. Species Comparisons between Private and Public Land The importance of private lands has been established, but little research has been done to quantify their biodiversity contribution (Hilty and Merenlender 2003). Even less research exists that quantifies the differences between land ownership types. Hilty and Merenlender (2003) found that only 27% of studies they reviewed had at least one site located on private land. Apprehension by private land owners and the complexities associated with access to private lands no doubt contribute to the limited amount of research currently conducted on private lands (Hilty and Merenlender 2003). Research comparing results between private and public land can provide some valuable insight for managers. For example, research done by Spies et al. (1994) looked at the fragmentation process in managed forest landscapes on both privately and publicly owned lands. Variability in timber harvest rates within ownerships was higher in privately owned land and the decline in closed-canopy forest was also greater. Morrison and Humphrey (2001) investigated patterns of distribution and reproductive activity of breeding pairs of crested caracara relative to land ownership and use. Eighty-two percent of active nests were found on privately-owned ranches. Small et al. (1991) found that ruffed grouse (Bonasa umbellus) mortality related to hunting on public lands versus private lands was higher (P _<_ 0.01) for both adults (73 % vs. 13 %) and juveniles (56 % vs. 9 %), respectively. 10 V mics. it : land on n obtainui. and Wild reference owners tl proving t' Valuable ; The Imp. L; 1117 :31 gem is lmPOfi; leflljgc‘ Wironm, arr-Didi); While research has been done to compare differences between the land ownership types, it is often limited by the ability to gain access to the privately-owned land fiom the land owner. Beneficial research can be conducted when access to private property is obtained. For example, restoration of privately owned wetlands through the US. Fish and Wildlife Service Partners for Fish and Wildlife Program were compared with reference wetlands on SGWA (Thompson 2004). The ability to access cooperative land owners through an established Partner’s program no doubt helped facilitate this research, proving that the removal of the existing barriers to private lands could indeed provide valuable insight to complex nature of landscape management needs and concerns. The Importance of Landscape Pattern Metrics on Herpetofauna Landscapes are characterized by the size and type of patches, as well as the spatial arrangement of patches within the landscape (Dunning et al. 1992). The size of the patch is important because smaller patches are more likely influenced by external factors. Likewise, organisms living in larger patches are less likely to be affected by environmental and biotic changes associated with edge effects (Saunders et al. 1991). Additionally, larger patches have greater species richness (MacArthur and Wilson 1967). The shape of the patch is also important, particularly for smaller patches because of potential increases in edge to interior ratio as shape complexity increases (Saunders et al. 1991) Landscape configuration refers to the spatial arrangement of patches within the landscape (McGari gal 2002). Landscape configuration is important to consider for amphibians and reptiles, especially because they tend to require distinct habitats for different life stages (Guerry and Hunter 2002). Landscape complementation refers to the 11 pr‘.‘ u’ndlllti] l0 jp‘l ”jut? proximity of critical habitat patches for species that require multiple patches during its life cycle (Dunning et al. 1992). Critical resources such as breeding ponds or foraging patches can be complemented by resources in close proximity to another patch (Dunning et al. 1992). Species that have limited dispersal abilities and small home ranges, such as amphibians, can be greatly affected by landscape complementation (Guerry and Hunter 2002). Anthropogenic land use such as agriculture or urban tends to reduce habitat availability, habitat suitability, and landscape connectivity and therefore can negatively impact amphibian abundance or occurrence (Bonin et al. 1997, Hecnar 1997, Knutson et al. 1999). Landscape-level features such as the density and arrangement of roads, forested areas surrounding breeding ponds, and proximity of habitat patch to water bodies are important in structuring amphibian communities (Knutson et a1. 1999). Species richness of herpetofauna in wetlands has been shown to decrease with increasing road density on adjacent lands (Findlay and Houlahan 1997). Local vegetation and soil conditions can be affected by land management practices and in turn, have the potential to influence the occurrence and relative abundance of herpetofauna. The landscape configuration in southern Michigan (i.e., a patchwork of SGWA in a matrix of private lands) makes understanding the contribution of private lands to SGWA conservation objectives a priority. With the majority of land in southern Michigan not being specifically managed for wildlife, it is essential to quantify the impact these lands have on SGWA management goals like conserving and enhancing wildlife and wildlife habitat. To properly understand the ecological importance of SGWA to the overall landscape, and in turn to the herpetofauna communities, 12 herpetofaunal species richness, occurrence, and abundance at sites of similar vegetation type and soil association were compared on multiple scales of patch and landscape. l3 nut-I. Ther Michigan's 1 Objectix'es 0 GOAL AND OBJECTIVES The overall goal of this project was to evaluate the ecological contribution of Michigan’s SGWA in providing herpetofaunal habitat to the landscape. The specific objectives of this research were to: 1) 2) 3) 4) survey the amphibian and reptile communities in selected Michigan SGWA and privately-owned lands to deterrrrine the occurrence, relative abundance, and diversity of these species, compare the amphibian and reptile communities between SGWA and privately-owned lands to ascertain the importance of the SGWA in the overall landscape, and determine if micro-site conditions such as vegetation, soil type, rainfall, and distance to nearest water body influence the occurrence and relative abundance of these species, assess landscape scale influences on the occurrence and relative abundance of amphibians and reptiles on SGWA and private lands, and make management recommendations for herpetofaunal diversity and conservation on SGWA. l4 (199:5) . totaling a broad relatl‘. c 10‘) d3) lflzgus 0th h; and “vi ct link 3 lk’ 51*.ng hcax } a Lie Far: L‘ili‘onu 83*?crn\ (bar; (“M-at. STUDY AREA The study area was located within the Lansing sub-subsection of Ionia (IV. 1) subsection of Region 1 in the southern Lower Peninsula of Michigan, based on Albert’s (1995) ecoregions. The Lansing sub-subsection is the largest in the Lower Peninsula, totaling 13,092 krnz. The entire state of Michigan was glaciated and the sub-subsection is a broad till-plain characterized by rich, loamy soils. It has uniform annual precipitation, relatively mild climactic conditions contributing to a growing season ranging from 140 to 160 days, and gently rolling topography. Three large rivers occur in this sub-subsection: the Maple, Grand, and Thomapple, as well as other smaller rivers. Pre-settlement plant vegetation in this sub-subsection was characterized by beech (F agus grandzfolia)-sugar maple (Acer saccharinum) forests, oak-hickory forests, and other hardwoods such as black maple (Acer nigrum), as well as lowland swamp forests and wet prairie. Current land use is dominated by agriculture. The majority of uplands have been converted to row-crop agriculture, and pastureland has replaced most of the swamp forests. Urbanization has occurred in this sub-subsection, and combined with heavy agricultural use, few large tracts of forest remain. This area also contains some of the rarest plant communities in Michigan: inland salt marsh and wet prairie. Unfortunately, only one salt marsh remains, and all of the wet prairies have either been drained for agricultural purposes or badly degraded (Albert 1995). Site locations were selected from map data using ArcGIS 9.1 (Environmental Systems Research Institute 2004). Specific patch sites were chosen based on three characteristics: 1) land ownership (SGWA vs. private), 2) vegetation type, and 3) soil association. The Integrated Forest Monitoring, Assessment, and Prescription (IFMAP) 15 QanXM Mhumg\ pmflHXl Mhumg: flmdeL Mmdwf' Edit 3rd ( ,\ En afiqtnts Of land rm nature Ccn Wnklj Created an l““lnl SCH: S} slt‘m\ “n m .- ‘- A Cr] GWVQ I md75 system (Michigan Department of Natural Resources 2001b) was used to select sites in the following vegetation types: lowland hardwoods (LHM, northern hardwoods (N HW), pine (PIN), upland hardwoods (U HW) (Table 1.1). Sites were also chosen in the following soil associations using US. General Soil Map (STATSGO) for Michigan data (United States Department of Agriculture 1994): Houghton—Carlisle-Adrian (HCA), Marlette-Capac-Parkhill (MCP), Marlette-Capac-Spinks (MCS), Miami-Hillsdale- Edward (MHE), and Spinks-Houghton-Boyer (SHB) (Table 1.2). Eighty-two sampling sites were located on 24 different private parcels and 7 different SGWA. Private lands ranged from 3 to 105 hectares (Table 1.3) with the type of land owner varying from private individual to nature preserve closed to the public to nature center opened to the public. SGWA ranged in size from 82 to 1,921 hectares (Table 1.3). All of the SGWA were accessible to the public. Sampling points were created within a patch comprised of a particular soil and vegetation type using a random point generator in the Animal Movement extension of ArcView 3.2 (Environmental Systems Research Institute 1999). Due to limitations of finding cooperative land owners on particular soil and vegetation types, replicate sites were often located on SGWA after a site on private land was selected. Of the 13 different SGWA in the Lansing sub- subsection, 7 were used in the study: Dansville, Grand River, Middleville, Muskrat, Oak Grove, Portland, and Rose Lake. Twenty-four private land owners located in 7 counties and 7 SGWA located in 6 counties were used in this study (Figure 1.1, Table 1.4). 16 _3 3:12.29.— ._.4..$3._ 2.722237. .2: 2.. 2.4.2.227. 23,292.; 1.2.7.. >727. 2,. 7.7.: A: :CCr. 7.3.3.2...732 22.222.22.22 22.222.22..1..A\ :...:.:\...C z; 2747): 7.832;: 2.2722929... 12: 4.5.—_xzbzzzx .1_._._.::._2C—.< 22.92.; 74:21.42: 5:: .2 12:12.49... .1..1..2U..Z2U 22:22.34...’ .\ .\ LEE: mm .Nmogo me $00 @888 much 32663 mo :09?“on SEQ 803253 98:5 @822 2 n .3058 05 we o\ooo meoooxo mafia (Ho 5quon A27: 0:5 .3088 2: mo $8 $085.. 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AA..V..VHJ.._.<._.T.» 2.32 :37. .2...Z..4..v .712 . .: 2.23.2.sz «7.333.; :22» 7.23.33.21.22: 52.7.. .rl.~ .4425 363 .0w0306 :00: 30> .w:0_ 60> 36.3 :0: 6060.56 6:0: 60306:: 3.6.3 :0: 60306 :03 6:00 3:03 630: 333 .302: 6030.6 :03 6:00 .303 mmm :03m-:06w:0m-m6am 3.6.3 .w:0_ 30> 606066 36.3 6: 6:0: 43:30:: 3600 60306 :03 .603 6:00 60306 :03 .3003 5:2 6:036m-0_063=m-_632 2.0.3 6: 6:00 6m 5:03 0.06.3 :0: $603 36.3 6: 5:03 m02 0633030006302 363 .w:0_ 606066 6:00 60306 .3000 $603 36.3 :0: $603 363 6: .3000— m02 23360300000063.3004 3.6.3 .0w0306 3.6.3 .0w0306 3.6.3 .0w0306 .80: 30> .w:0_ 60> :00: 60> .w:0_ 30> :00: 60> .w:0_ 60> 606066 6:00 60306:: 606066 6:00 60306:: 606066 6:00 60306:: .53 002 .62.. as: 002 .62.. as: 00: .62.. <0: 0.000-268-0268: 0600 m 60:00:60 N 60:09:00 3 60:09:00 =0m :06300000. 60m 60:3— 000 06600600 OOmH. Accessed: 4 September 2005. Michigan Department of Natural Resources. 2005. Biodiversity Conservation Planning Process. Department of Natural Resources, Forest, Mineral, and Fire Management Division, Lansing, Michigan, USA. Morrison, J. L., and S. R. Humphrey. 2001. Conservation value of private lands for crested caracaras in Florida. Conservation Biology 15(3):675-684. Myers, N. 2001. Protecting endangered species in the United States. Cambridge University Press, New York, New York, USA. Perkins, D. W., and M. L. Hunter. 2006. Effects of riparian timber management on amphibians in Maine. Journal of Wildlife Management 70(3):657-670. Pough, F. H. 1979. Acid precipitation and embryonic mortality of spotted salamanders, Ambystoma maculatum. Science 192168-70. Primack, R. B. 2004. A primer of conservation biology. Third edition. Sinauer Associates, Inc., Sunderland, Massachusetts, USA. Reaser, J. K., and A. Blaustein. 2005. Repercussions of global change. Pages 60-63 in M. Lannoo, editor. Amphibian declines: the conservation status and of United States species. University of California Press, Berkeley, California, USA. Regosin. J. V., B. S. Windmiller, R. N. Homan, and J. M. Reed. 2005. Variation in terrestrial habitat use by four pool-breeding amphibian species. Journal of Wildlife Management 69(4): 148 l -1493. 26 Sauns: Saundc SnuflL C (1 Saterson, K. A., N. L. Christensen, R. B. Jackson, R. A. Kramer, S. L. Pirnm, M. D. Smith, and J. B. Wiener. 2004. Disconnects in evaluating the relative effectiveness of conservation strategies. Conservation Biology 18(3):597-599. Saunders, D. A., R. J. Hobbs, and C. R. Margules. 199] . Biological consequences of ecosystem fragmentation: a review. Conservation Biology 5(1):]8—32. Small, R. J ., J. C. Holzwart, and D. H. Rusch. 1991. Predation and hunting mortality of ruffed grouse in Central Wisconsin. Journal of Wildlife Management 55(3):512- 520. Spies, T. A., W. J. Ripple, and G. A. Bradshaw. 1994. Dynamics and pattern of a managed coniferous forest landscape in Oregon. Ecological Applications 43(3): 555-568. Stebbins, R. C., and N. W. Cohen. 1995. A natural history of amphibians. Princeton University Press, Princeton, New Jersey, USA. Thompson, K. F. 2004. Evaluation of partners for fish and wildlife wetland restoration efforts in the Saginaw Bay watershed. Master’s Thesis, Michigan State University, East Lansing, Michigan, USA. United States Department of Agriculture. 1994. US. General Soil Map (STATSGO) for Michigan. Natural Resources Conservation Service. Fort Worth, Texas, USA. < http://www.fiw.nrcs.usda.gov/stat_data.html>. Accessed 10 Jan 2005. University of New Mexico Center for Wildlife Law and R. S. Musgrave. 1998. Federal wildlife law of the 20'“ century. Center for Wildlife Law at the Institute of Public Law, School of Law, University of New Mexico, Albuquerque, New Mexico, USA. Vitt, L. J ., and J. P. Caldwell. 1990. Viewpoint: amphibians as harbingers of decay. BioScience 40:418 Welsh, H. H., Jr., and S. Droege. 2001. A case for using Plethodontid salamanders for monitoring biodiversity and ecosystem integrity of North American forests. Conservation Biology 15(3):558-569. 27 Welsh. ‘. Wilson. I Welsh, H. H., Jr., and L. M. Ollivier. 1998. Stream amphibians as indicators of ecosystem stress: a case study from California’s redwoods. Ecological Applications 8(4):] 1 18-1 132. Wilson, E. O. 1988. The current state of biological diversity. Pages 3-20 in E. O. Wilson, editor. Biodiversity. National Academy Press, Washington, DC, USA. 28 Cl Kid: ulrr: glob infer €0.95 CCQS 0th 19%): a, and } PF ll I CHAPTER 2: DESCRIPTION OF THE HERPETOFAUNAL COMMUNITIES IN STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS INTRODUCTION During recent decades, much attention has been focused on the global decline of herpetofauna, particularly amphibian populations (Kiesecker et al. 2001). Several factors have been implicated in this recent decline including habitat loss and fragmentation (Blaustein et a] 1994, Blaustein and Kiesecker 2002), introduced predators (Blaustein and Kiesecker 2002, Kats and Ferrer 2003), pollution (Alford and Richards 1999), increased ultraviolet B (UV-B) radiation (Alford and Richards 1999, Reaser and Blaustein 2005), global climate change (Alford and Richards 1999, Reaser and Blaustein 2005), and infectious disease (Alford and Richards 1999, Reaser and Blaustein 2005). Concern about amphibian declines is most likely due to their potential role as indicators of environmental stress (Halliday 2000, Blaustein and Kiesecker 2002, Reaser and Blaustein 2005). Amphibians use both aquatic and terrestrial habitats, and therefore come into contact with both aquatic and terrestrial stressors (Stebbins and Cohen 1995, Blaustein and Kiesecker 2002). Amphibians are believed to play a critical role in ecosystem dynamics because they are the most abundant vertebrate in many forested ecosystems (Burton and Likens 1975). Their decline could have a substantial impact on other organisms because it could disrupt ecosystem functioning (Blaustein and Wake ]995, Blaustein and Kiesecker 2002). A broad scale and severe population decline could have considerable and lasting effects on ecosystems potentially resulting in adjustment and restructuring of food webs of amphibian invertebrate prey and vertebrate predators. The recent global amphibian decline demonstrates the need to conserve and protect these species (Alford and Richards 1999); however, 23.4% of amphibians are 29 "Data De‘ deficient 1 nmdmc extinct (l protectim be llSlL‘d ornnern; character Sllccessr~ Despite Ol‘ll’lcsc esSé'mla @3011.) gjk [filmm- beCCiUsc ”3118 cr lhlt‘e lc ‘nll ha (Hiitr “ale, Ct» .V‘." rm'l-‘L‘x “Data Deficient” (IUCN, Conservation International, and NatureServe 2006). Data deficient means that the information available on particular species’ distribution, abundance, and status is not sufficient to properly assess the potential of the species to go extinct (Hilton-Taylor 2000). Thus 23% of all amphibians worldwide may need protection, but the information to make informed decisions is unavailable. For species to be listed as a species of special concern, threatened, or endangered at the state, federal, or international level, adequate and accurate information based on life history characteristics and/or field ecology studies is needed (Bury 2006). Knowledge of distributions and abundances of herpetofauna is critical for the successful management and protection of these declining organisms (Bury 2006). Despite the need for this kind of information, there has been a decline in recent decades of these types of studies (Bury et al. 2006, McCallum and McCallum 2006). It is essential to determine life history traits when a species is still common and has an ecologically functioning population (McCallum and McCallum 2006). Life history requirements should not be determined when species are on the verge of extinction, because environmental stressors may have influenced these traits, thereby altering the traits consistent with healthy environments (McCallum and McCallum 2006). The continuing loss of biological diversity (the variety of life that encompasses three levels of biological organization: genetic, species, and ecosystem (Primack 2004)) will have an effect on our understanding of species and the function of ecosystems (Heyer et al. 1994). Knowledge of basic life history traits, such as species distributions, also contributes to the understanding of biological diversity (Greene 2005). Biodiversity resides in a diverse landscape of private and public lands (Saterson et al. 2004) and 30 species « BL’C 311M Chdilt'll ; adjucen 1101 cnr necess. 11568. OR] her species do not recognize legal boundaries between land ownership types (F orrnan 1995). Because of biological diversity’s complex nature, natural resource managers are often challenged with ways to conserve it on both protected and/or managed areas and the adjacent matrix of multiple-use lands (deMaynadier and Hunter 1995). Therefore, it is not enough to conduct research solely on protected or managed land, but rather it is necessary to study biological diversity on an assortment of land ownership types and uses. To assess biological diversity on the species level, the distribution and abundance of herpetofauna in the southern lower peninsula of Michigan were sampled on Michigan’s State Game and Wildlife Areas (SGWA) as well as on privately-owned parcels in the spring and summer of 2005 and 2006. Eighty-two sites were sampled on a patch scale, and sites were selected based on three characteristics: 1) land ownership, 2) vegetation type, and 3) soil type. The southern Michigan landscape has been manipulated and transformed, much like the rest of the agricultural dominated Midwest, and over 75% of wetland habitats in the Midwest have been lost to agricultural, industrial, and development (Detenbeck et a]. 1999). Because herpetofauna can be indicators of environmental quality and contribute to overall biological diversity, and because the southern lower peninsula of Michigan landscape is a mosaic of land ownership types and land uses, the study area was an acceptable location to research herpetofaunal distribution and abundance, as well as the contribution of land ownership types to the conservation of herpetofaunal diversity. The objectives of this study were to: I) generate a species inventory, 3] B} in If vs ithin a begin to decisions A] the Michig 2) describe herpetofaunal richness, occurrence, relative abundance, and diversity in forested patches, 3) compare these factors by differing land ownership types, and 4) compare these factors within study years. By investigating the herpetofaunal communities within different sampling years and within a patchwork of SGWA in a matrix of private lands in southern Michigan, we can begin to build a foundation of knowledge upon which to base future conservation decisions. All capture, handling, and marking protocols used in this study were approved by the Michigan State University Animal Care and Use Committee (AUF# 07/03-082-00). METHODS Drift Fence Arrays Drifi fence arrays made from 60 cm high aluminum flashing with pitfall and fiinnel traps were used to capture herpetofauna (Corn 1994, Enge 1997). Drifi fences intercept herpetofauna moving on the ground and re-direct them into a pitfall or funnel trap. Drift fences with pitfall and funnel traps were installed in April and early May prior to opening the traps in mid-May. They were opened for 5 consecutive nights each month in 2005 and 4 consecutive nights each month in 2006 from May through August (Table 2.1) and were checked once daily. Three 5 m long sections of aluminum flashing were installed in a Y arrangement and 4 pitfall traps and 6 funnel traps were placed within the 32 Tab} oper 51-1”: _' M. Table 2.]. Dates drifi fence arrays, pitfall traps, funnel traps and coverboards were opened in southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006. Date Opened Date Closed Number of Sites 05/17/2005 05/22/2005 20 05/24/2005 05/29/2005 22 06/06/2005 06/1 ]/2005 20 06/14/2005 06/ 19/2005 22 07/ 1 ]/2005 07/16/2005 20 07/19/2005 07/24/2005 2] 08/05/2005 08/09/2005 20 08/10/2005 08/14/2005 2] 05/08/2006 05/12/2006 17 05/15/2006 05/19/2006 14 05/22/2006 05/26/2006 9 06/06/2006 06/ 16/2006 1 7 06/12/2006 06/ 16/2006 20 06/ 19/2006 06/23/2006 3 07/05/2006 07/ 09/2006 1 7 070/9/2006 07/13/2006 3 07/12/2006 07/16/2006 20 07/31/2006 08/04/2006 20 08/07/2006 08/1 ]/2006 20 33 array (see frum 18.9 to allow f below gm placed in z 1994). Th Traps wen Fun in the am}- bOd} comp: Screening c \— diameter ll hmn'els ar Coverho the dri‘ Ema}- ll 1 m 3e mlii 3L Sim/la; ; array (see Fig.1 Enge 1997). Arrays were oriented to the north. Pitfall traps were made from 18.9 L buckets. Holes were drilled approximately 2 cm'from the bottom of the trap to allow for drainage of rainwater (Enge 1997). The pitfall traps were buried slightly below ground level, allowing animals to drop into the bucket. Moistened sponges were placed in all pitfall traps to prevent desiccation of captured animals (Greenberg et al. 1994). The sponges were remoistened as needed (Enge 1997, Richter and Seigel 2002). Traps were closed by placing lids over the buckets. Funnel traps were placed at the midpoint of each wing of the aluminum flashing in the array (Greenberg and Tanner 2005). Funnel traps were double entry with the main body comprised of aluminum window screening and the funnels of flexible fiberglass screening. Traps had 20 cm openings at both ends with funnel openings of 5 cm in diameter (Corn 1994). When not in use, fimnels traps were closed by inverting the funnels and clipping them shut. Coverboards Coverboards (Fellers and Drost 1994, Davis 1997) were placed within. 1m from the drift fence array in the four cardinal directions at least one week prior to drift-fence array installation. Coverboards were made of untreated birch plywood and cut into 1 m x l m sections and were placed on bare ground. Coverboards are designed to provide moist, cool refuge for herpetofauna (Houze and Chandler 2002) and create a microhabitat similar to a downed log. Coverboards were checked every day that the drift fence arrays were open. 34 Area Time-l Area Cnrmp and 30")6: 23 \1 l1 August. 3"- m area ( time-const ATC sum directions. and \Eggr 3133 Was I alld Start the US. l CidSSlfigd Anuran Area Time-Constrained Surveys Area time-constrained surveys (ATC surveys) (Campbell and Christrnan 1982, Crump and Scott 1994) were conducted on each site once a month from May to August in 2006: 23 May - 3] May, 1 June— 2 June, 19 June — 27 June, 19 July — 26 July, 1 August — 12 August; and in June and July in 2005: 22 June — 30 June, 22 July — 31 July. A 2 m x 37 in area (the same total area as the drift fence array) was delineated to conduct the area time-constrained surveys, and this same area was used for surveys throughout the season. ATC survey areas were selected near the drift fence array in one of the four cardinal directions, starting east of the array. When a 2 m x 37 m area fit in the designated soil and vegetation type, it was georeferenced with a GPS unit and flagged. This designated area was hand-searched for a period of 20 minutes by overturning downed logs and rocks and searching through leaf litter. Decay classes of the logs were recorded according to the US. Forest Service’s FIA Field Methods for Phase 3 Measurements, five decay classifications (USDA Forest Service 2004) (Table 2.2). Anuran Call Surveys Frog and toad song counts were conducted between April and August in 2005 and 2006 using a method similar to the North American Amphibian Monitoring Program (NAAMP) (Weir and Mossman 2005). Frog call surveys differed from NAAMP protocol by the number and location of survey points. NAAMP protocol requires 10 listening locations along a road near potential amphibian breeding habitat. The number of listening locations during my surveys varied, as well as the location where the calling survey was conducted. During the 2005 season, surveys were conducted in different habitat types (lowland hardwoods, northern hardwoods, upland hardwoods, and pine) at 35 Table 2.2. area time-c and 13er Class Ll 14 IS Table 2.2. Five decay classifications of downed logs (US. Forest Service 2004) used in area time-constrained surveys in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006. Class Description L1 Bark intact, twigs present. Texture is intact. Wood is original in color. Log is elevated on supported points above ground. L2 Bark intact, twigs absent. Texture is intact to partially soft. Wood is original in color. Log elevated on support points but sagging slightly. L3 Trace of bark. Twigs are absent and texture is hard large pieces. Color of wood is original to faded. Log is sagging near ground. L4 Bark and twigs are absent. Texture of wood is small, soft, blocky pieces. Wood is light brown to faded brown or yellowish. All of the log is on the ground. L5 Bark and twigs are absent. Texture of wood is soft and powdery. Color of wood is faded to light yellow or gray. The diameter of the log is attainable. Wood and log debris is not spread out in a flat manner. If a diameter is not attainable, then it is not considered a log, but a pile of debris. 36 '1! 'l; H 'IJ the center of the drift fence array; however in 2006, surveys were conducted from the edge of the water body in closest proximity to the drift fence array. All sites were surveyed for five minutes one night in May, June, and July, and 33 of the 82 sites were surveyed one night in April. Surveys began 30 minutes after sunset and were completed by midnight. They were conducted if the air temperature was greater than the minimum allowable temperature for each sampling period (Sargent 2000) (Table 2.3) and during little or no wind (at a level three or less on the Beaufort scale) (Berry et al. 1945) (Table 2.4). Surveys conducted outside of the Michigan Frog and Toad Survey periods (July) used the minimum air temperature for the early summer time period. The intensity of calling males were rated 0 through 3, with 0 = no individuals calling; ] = few individuals, but with non-overlapping calls; 2 = overlapping of calls, but individuals can be identified; 3 = full chorus with indistinguishable individual calls (Weir and Mossman 2005). Mark-Recapture Techniques All animals captured by pitfall traps, funnel traps, cover boards, and area time- constrained searches were processed before being released. Herpetofauna were identified to species, sexed (when possible), and marked. All amphibians were measured (snout to vent length, mm); and northern leopard frog (Rana pipiens), American toad (Bufo americanus), and green frog (Rana clamitans) with a snout to vent length measurement > 50 mm were PIT tagged (passive integrated transponders; AVID®). Salamanders and all other Anurans were marked by toe-clipping except treefrogs and relatives, but not for individual recognition. Measurements and weights for Anurans and salamanders are listed in Appendices 2.1 and 2.2, respectively. Snakes and turtles were measured and marked for individual recognition. All snakes were marked by clipping half of one 37 Table 2.3. Peninsula t protocol (S Surrey Per E851) Spfll late Spring Earl} Sunrr Table 2.3. Survey periods for conducting fi'og call surveys in the southern Lower Peninsula of Michigan, using Michigan Department of Natural Resources call survey protocol (Sargent 2000). Survey Periods Range of Dates Minimum Air Temperature Early Spring 25 March — 30 April 7.2 C (45 F) Late Spring 1 May — 31 May 12.8 C (55 F) Early Summer 1 June — 30 June 18.3 C (65 F) 38 Table 2.4. Windspeed classifications used to determine if frog call surveys should be conducted based on the Beaufort scale. Surveys were not conducted if windspeeds were >3 on the Beaufort scale (Berry et al. 1934). Scale Description 0 Calm, (<1.6 kph) smoke rises vertically 1 Light Air (1.6-4.8 kph) smoke drifts, weather vane inactive 2 Light Breeze (6.4-1 1.3 kph) leaves rustle, can feel wind on face 3 Gentle Breeze (12.9-19.3 kph) leaves and twigs move around small flag 4 Moderate Breeze (20.9-28 kph) moves thin branches, raises loose papers 5 Fresh Breeze (30.6 kph or greater) small trees begin to sway 39 ventral scale (Brown and Parker 1976) and turtles were marked by notching marginal scutes (Cagle 1939). Measurements, weights, and sexes are listed for individual snakes and turtles in Appendices 2.3 and 2.4, respectively. Individuals were releaSed at least 5 m fiom the point of capture on the opposite side of drift fence to minimize the probability of immediate recapture. Data Analysis Data were analyzed in three different ways to meet each of the study objectives. First, I examined the data across all sites by pooling both years of data collection to generate a species inventory and to describe herpetofaunal richness, occurrence, relative abundance, and diversity for the study region. To determine how land ownership could affect these factors, data from SGWA were pooled and compared to pooled data from private lands. Last, because of potential annual affects of temperature and precipitation on herpetofaunal, I also examined species richness, occurrence, abundance, and diversity data within years regardless of land ownership type. Species richness is defined as the number of species present in a specified area (Bolen and Robinson 1995). Total species richness was calculated by tallying the total number of species detected for each ownership type (i.e., SGWA or private) using all trapping methods as well as incidental sightings. Mean species richness was calculated by summing the total number of species trapped at each survey site and dividing by the number of trap sites. Species frequency of occurrence is a count of the number of sites out of the total number of sites sampled where a species was observed (Lancia et al. 1994). Species frequency of occurrence was calculated by tallying the total number of sites where 40 Re {1ft Ill: Re uh tr h Ian BIT. particular species were detected using all trapping methods as well as incidental sightings. Species abundance refers to the number of individual animals (Lancia et al. 1994) and relative species abundance adjusts for differences in raw abundances among sites. Relative species abundance was calculated by standardizing array captures by trap nights and standardizing area time-constrained captures by number of surveys and combining them. Relative species abundance only included ATC captures from June and July. Recaptures of individuals were excluded when evaluating species abundance. Species diversity considers the species richness and relative abundance in a specified area (Bolen and Robinson 1995). Species diversity for each survey site was calculated using Shannon’s Diversity Index (Shannon 1949), as well as the Simpson Index of Diversity. Shannon’s Diversity Index was calculated as follows: H' = - 2 (1):) (ln 1):) where p,- denotes the proportion of the sample belonging to the ith taxon (Shannon 1949). There is no definitive range for the Shannon Diversity Index. The Simpson Index of Diversity (Simpson 1949) was calculated as follows: D = 1 - z (pf) where p,- denotes the proportion of the sample belonging to the ith taxon. The index ranges from 0 to 1, with values near 1 indicating a highly diverse or heterogeneous site and values near 0 corresponding to a more homogeneous site. Herpetofaunal community similarity among survey sites was calculated using the Bray-Curtis coefficient (Bray and Curtis 1957), which standardized the City-block 41 (Manhattan) metric. It has a range of 0 (similar) to 1 (dissimilar), where distance measures (proximity of sites in species space) are expressed as proportions of the maximum possible distances between sites (Krebs 1999). The Bray-Curtis is a proportional distance coefficient, which is the most commonly used distance metric in species abundance data, and is often used with community ecology studies (McGarigal et al. 2000). The Bray-Curtis coefficient was calculated as follows: _ 22m1n(xij,xhj) Bjk —1— loci]. +xhj) where min is the smaller of the two values (Mche and Grace 2002), xi} is the predicted probability of species j at site I, and xhj is the predicted probability of species h at site j. To define this as a measure of similarity, the complement of the Bray-Curtis measure was used: (l-B) (Wolda 1981). Two sites were removed before calculating the resemblance matrix because they both did not have any captures; therefore, I was unable to generate an index for these two sites. All analyses were done using R 2.4.0 (R Development Core Team 2006). RESULTS Species Inventory Twenty-two species of amphibians and 29 species of reptiles have been documented to occur in the Lower Peninsula of Michigan (Conant and Collins 1991, Harding 1997) (Table 2.5). In the Lansing sub-subsection of the Ionia subsection of Region One, 1] species of Anurans (frogs and toads), 7 species of Caudates (salamanders), 9 species of Testudines (turtles and tortoises), and 17 species of Squamates (lizards, Amphisbaenians, and snakes) are expected to occur (44 total; 42 9:. E z: 2.4.5 7.: .::1:_.J;£.~3 EDI—JED.— ._..._$C ~ 0.: :._ -2743: C. 7.9.2.1223... 7.3:.ng 7:... 7.2.....£.:7:.:...\2 1.9.9.317. 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X 0230005 0100008800 003000080 08088 08803800 00200890380. X 0230005 00:08.88 003000 5803008 0580.350. 002008030380. X 0230005 30: 80.000 8000.00.83 0380038002 00200008805 «08:82 00304 8000038005 :080 00008 803.03 .8280: 800.588 000.5 0008005 X 0230.05 3000008 8003008 0.55.002 00208.5 803.805 00.2~ 005 885805 0802 008800 080 Z 02:85 30:0,.“ .8000Z030 _080208 880808 0.3200 00808800 080000 0:0 0000000080 0:0 .0008 30:3 .0008 20.20 .23 003000 $0.00 00:00 200 >9 0080000 :0 0003 008 0:0 moom 008800 8 00000 >23 08 8 003030 003 002005... .9005 880082 0:0 200: 08:00 0:0 80:00 808 00880000 0003 00800 0020005 .000 080 08 8 00 :03 00 805882 m0 0308:; 00304 05 8 .8000 8 008080000 00:80.— 0:0 0:038:80 mo 0020005 .m.m 030B 43 00000000000 X 000882 0030.0 0w00000008 0000000 000000000 0800080 0000.005 002008> X 0030002 0033 02000 00000-w00 0000000 00030003 00000000: 00200800 X 0230.05 08000 002000-080 00000300 000000000 0.88005 00200800 X 0230005 0000000 0:00 0000000 880800.20 580000.000 030.00.080.00 00200800 0080002 0030.0 0000000 08000 0.0.0 008000 .0088 080.000.0000. 00200800 X 008.0002 030.0 00000005 02000 00.. _000000 00000000 080.000.0002 00200800 X 008022 0033 00000005 000 0000003 000000 080 000x0008000000 00080 0 00200800 X 0008002 0033 000.0005 000 0000003 00000 0.080 000.0000 0000000000 0000000000 00800 00200800 X 0230005 02000 00000 80080 0.00000: 0000000006 00200800 00800080008000 X 0230005 *02000 000000-000 0000000: 00800000008000 0.20.005 00200800 X 0230005 02000 03000 0000000 0.20005 00200800 X 000882 00300 0.00.000 00000.. 00000000 0000000000000 000.2000 0.030080: 00200800 X 000.882 0030..— 0000000 0.02000 00000w 0.0000m .2008 080.00.00.00 00200800 X 0230005 u0000000 00.000 0000000 0.8030 0.0030 001000.000 00200800 0008002 00301— 0008005 08000 0.0000002 00000000 030.0080 00200800 X 008022 0033 0000003 000 000.0005 000000 00000 808080300 000002 00200800 X 0080002 0030.0 000000-505 02000 0003 0050000008 0000000: 00000800000000 0.000002 00200800 X 0230005 0.000000 00003 00000000 000080 000080 0.000002 00200800 X 0230005 00:20 0087030 0000.0000x0000000i 0020805 X 0008002 .0300 0:000 =000¢00 0.000 000.08% 0000050. 002008800. X 0080002 033 000.0005 00000 0000000.. 0000000 88000 0080000000 0020.080 X 0230005 n000000 000800 0003 08000080 002085 X 00.0.0022 0030.0 0000003 000 0005005 0:000 008 008800 003%00M00M 008008.00 0020080 X 0230005 0.0008 0080005 00.80003 000000AEN 00238.0 X 0080002 0033 000003 000 00000005 0,0008 0.00 0000000 00.80000 00.80000 0000.05.00 0020080 0000000005 00000 >005 0280.805 0802 008800 0802 0.0000005 b08000 .0008 .00. 2000 44 Hardin familic indnid Species study (" 0.23 SE pm are . (“Bragg richness WT Sam; lands (T; (Emzfldo (CM dr. bcHicd Sr Pm are 13‘ (.ngdi-a A. ’nbngulu \\ heme?” from 0 h ”Chum Harding 1997). Twenty-two different species of amphibian and reptiles from 8 different families were observed during the surveys (Table 2.5). Specific methods used to observe individual species ranged from one technique to all six different methods (Table 2.6). Species Richness Twenty-two species were observed on both SGWA and private lands during the study (Table 2.5). Overall species richness among the 82 sites ranged from O to 9 (4.8 i 0.23 SE). Nineteen species were observed on SGWA, and 17 species were observed on private lands (Table 2.7). At SGWA sites, species richness ranged from 1 to 9, with an average of 4.6 species (:1: 0.36 SE) captured per sampling site. At private sites, species richness ranged fiom zero to nine, with an average of 4.4 species (i 0.28 SE) captured per sampling site. Mean species richness was greatest in July for both SGWA and private lands (Table 2.8). Five species were found solely on SGWA: Blanding’s turtle (Embydoidea blandingii), painted turtle (Chrysemys picta), common snapping turtle (Chelydra serpentina), Butler’s garter snake ( T hamnophis butleri), and northern red- bellied snake (Thamnophis sauritus septentrionalis) and 3 species were only found on private land: eastern box turtle (Terrapene carolina carolina), northern water snake (Nerodia sipedon sipedon), and eastern milk snake (Lampropeltis triangulum triangulum). When examining a potential year effect, I saw differences in species richness between 2005 and 2006. Overall species richness among the 42 sites in 2005 ranged from 0 to 9 (5.3 :i: 0.32 SE) with 22 species observed (Table 2.9). Overall species richness among the 40 sites in 2006 ranged from 0 to 9 (4.2 i 0.32 SE) with 15 species 45 X 32 8:25 .833 Eonto: $2 X 2:8 @853 X $2 255 flwcmvcflm X $2 2:3 xon 8830 X $2 X 0E3 wcammcm 5888 X X X X X X wow 2302 805.5: X X X X X X mob coo? X X X X X wofi 5on x 85:5 X X X X X X common wctam X X X wofi 35% £283 X X X X X weave: haw 88mm» X X X X X X 38 5858.4 5830 .32 X X X X covgfiafim 9.66362 32 X X HousmEmBm how: 88me $2 X X X X BecaESmm 3:25-095 nosetomno hogm .1635 35205 :50 wen UH< _Eti _oSSm “6.80%?on 88on .3033 Eon coom can moom 2: macaw 23322 mo Bnmficom .833 50558 2: E 86on 3:339: 83% 8 wow: mwofiofi >955 can mosvmqfioa 8395 .o.m 2an 46 .up ~: 3.4 .C .rl 371.; Lou—wow _uocwmwaOo Demaamouw H UH<* 32 X 88.8 VEE 5888 X $2 .822 833 32 X X 8.28 35362 Boston «:2 X X 835 coast F855: <\Z X 8:28 88% P835 X <\Z X X X 3.58 89% F883 5:83.830 anagram 33.8w 38385 zoo moi UH< 2835 855...— Eoo98>o0 88on is 8.235 47 Table 2 the sou‘ capture cox erb< blue-5p eastern red-haul eastern . eastern . WESICI'n Spring p bUllfrth 136m frr “00d in nonhcm mmmOn mm] b Blanding Painted 1'. “(inhem eaSicm g- Table 2.7. Overall herpetofaunal species richness on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, fimnel traps, and coverboards and area-time constrained survey including incidental observations. Species SGWA Private X X blue-spotted salamander eastern tiger salamander red-backed salamander eastern American toad eastern gray treefro g western chorus flog spring peeper bullfrog green frog wood frog XXXXXXXXXX northern leopard fio g XXXXXXXXXXX common snapping turtle X eastern box turtle X Blanding’s turtle X painted turtle northern water snake X eastern garter snake Butler’s garter snake northern ribbon snake northern red-bellied snake blue racer XXXXX X eastern milk snake X 48 Table 2.8. Mean (SE) herpetofaunal species richness of SGWA and private lands by month in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Month SGWA Private (n = 41) (n = 41) May 1.2 (0.16) 1.4 (0.18) June 2.1 (0.23) 1.2 (0.21) July 3.0 (0.33) 2.8 (0.26) August 2.5 (0.21) 2.6 (0.23) 49 C00 ”(If llor blu, e351 Table 2.9. Overall herpetofaunal species richness by year in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area—time constrained survey including incidental observations. é Species 2005 X blue-spotted salamander eastern tiger salamander red-backed salamander eastern American toad eastern gray treefro g western chorus frog spring peeper bullfi'og green frog wood frog northern leopard frog XXXXXXXXXXXX common snapping turtle eastern box turtle Blanding’s turtle painted turtle northern water snake eastern garter snake Butler’s garter snake northern ribbon snake northern red-bellied snake blue racer XXXXXXXXXXXXXXXXXXXXX eastern milk snake _ 50 observed (Table 2.9). Seven species observed during the field season in 2005 were not observed in 2006, and all were reptiles: Blanding’s turtle, painted turtle, common snapping turtle, Butler’s garter snake, northern water snake, eastern milk snake and northern red-bellied snake. Species Frequency of Occurrence The eastern American toad was the most ubiquitous species, occurring at 71 out of 82 sampling sites (87%) (Figure 2.1). The next most frequently occurring species was the wood frog, observed in 69 out of 82 sites (84%), followed by the green frog, observed in 58 out of 82 sites (71%) (Figure 2.1). Nine species occurred at less than 15 of the sampling sites (Figure 2.2) across the study area. The least frequent species included northern water snake, eastern milk snake, Butler’s garter snake, painted turtle, eastern box turtle, and Blanding’s turtle; each occurred in only one out of 82 sites (<2%). When evaluated by land ownership type, I saw a similar pattern of species occurrence: eastern American toad occurred most frequently in SGWA (34 out of 41 sites (83%)) and private lands (37 out of 41 sites (90%)), followed by wood frogs in SGWA (33 out of 41 sites (80%)) and private lands (36 out of 41 private sites (88%)) (Figure 2.3). When examining the year effect, I again saw a similar pattern of species occurrence. The eastern American toad occurred most frequently in 2005 (39 out of 42 sites (93%)), followed by wood frogs and green frogs (37 out of 42 sites (88%)) (Figure 2.4). 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O o 0 § v I o. A. O 0 .7 o o o v v v o f .1 so 0 o a d 0 av 0o ,0 Q Q 9 0.. 0.. ea 0.. 0o 0; 91 o; o: o o o as .. a 60 60 oo o90.4%..“a¢oaovovovoovoveolooo o o a a a! o/ s/ 0/ 9o 0o 9e «a so 00 o 99 v9 90 N n w 88. E , m 88 I m. s m mv 55 observed most frequently (32 out of 40 sites (80%)), followed by green frogs (21 out of 40 sites (53%) (Figure 2.4). When considering data from the fi'og call surveys, frequency of occurrence for Anuran species differed dramatically. Overall, the most frequently heard species of Anurans were gray treefrogs followed by green fi'ogs (Figure 2.5). Bullfrogs and wood frogs were the most infrequently heard species during the call surveys (Figure 2.5). In both 2005 and 2006, the most fi'equently heard species of Anurans were gray treefi'ogs followed by green frogs and spring peepers (Figure 2.6). In 2005, the most infrequently heard species were wood fi'ogs and bull fiogs, and in 2006 the most infrequently heard species were bullfrogs and western chorus frogs (Figure 2.6). Species Abundance A total of 4,410 individuals were captured during the 2005 and 2006 seasons, resulting in 4,379 individual amphibians and 31 individual reptiles. Wood frogs were captured in greatest numbers and comprised 53% of all captures (2,342 individuals captured), followed by the eastern American toad (870 individuals captured (20%)) and green frog (560 individuals captured (13%)) (Table 2.10). Captures of wood frogs and green frogs were greatest in July (1,302 and 298 individuals, respectively) accounting for 56% of all wood frogs captured and 53% of all green frogs captured (Table 2.11). The most captures of eastern American toads occurred in August (339 individuals) accounting for 39% of captures (Table 2.11). Species capture abundances on land ownership types varied considerably from month to month. On SGWA, captures of wood frogs were the greatest in July (Figure 56 .3303 :00 wot 00 00000 coom 000 moon 0000800 00 00wfioaz 00 20000000 0033 0.005000 05 E 000000000 0050< 00 30000000 .m.~ .wE 00.025 .38 no... 9:300. no...— 03000 wok—00... 03:005. 0.35.3: MP: 0003 M0...— 0000» wet—=5 02—02— 953 583.: Era 5823 58:8 Vow row row roc rom sans :0 non-nu Tow .om Tom 57 000300 :00 mob 00 00000 ooom 000 Sam 008003 E 00manz 00 23.00000 .0304 0.00038 05 00 000% .3 000000000 000:0».~ 00 000000000 .o.m .wE m0_000m 000. we: 0.3002 000000 M0...— 000000 00:00.: 00020:; 0.5500: M0...— 0003 M0,... 0000M went—=0 u0t0m 00800.: 00..“ 0.5300 0.53.00 ON 88 n_, 88 I0 ymN says )0 JaqlunN 58 Table 2.10. List of herpetofaunal species captured and their combined capture abundance in the southern Lower Peninsula of Michigan in summer 2005 and 2006 fiom drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Common Name Total Captured Number of Sites where Captured blue-spotted salamander 57 22 eastern tiger salamander 87 5 red-backed salamander 67 22 eastern American toad 870 71 eastern gray treefrog 38 20 western chorus frog ll 8 spring peeper 215 42 green frog 560 58 wood frog 2,342 69 northern leopard frog 132 28 common snapping turtle 3 2 painted turtle l l eastern garter snake l6 l4 Butler’s garter snake l l northern ribbon snake 7 4 northern red-bellied snake 2 2 eastern milk snake 59 Table 2.11. Total herpetofaunal species captured and their monthly capture abundance in the southern Lower Peninsula of Michigan in summer 2005 and 2006 from drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Common Name May June July August blue-spotted salamander 28 7 15 7 eastern tiger salamander 0 O 83 4 red-backed salamander 23 16 23 5 eastern American toad 64 112 335 339 eastern gray treefrog 9 3 12 14 western chorus frog 0 2 6 3 spring peeper 9 26 132 48 green frog 10 117 298 135 wood frog 134 230 1302 676 northern leopard frog 1 4 85 42 common snapping turtle l 2 0 O painted turtle 0 O 1 0 eastern garter snake 0 3 7 6 Butler’s garter snake O 0 1 0 northem ribbon snake 6 0 0 l northern red-bellied snake l O l 0 eastern milk snake 0 0 l 0 60 2.7). However, on private lands, captures of wood frogs were the greatest in August (Figure 2.8). Captures of eastern American toads were greatest in August for private lands and in July for SGWA (Figures 2.7 and 2.8). Captures of green frogs were greatest on both land ownership types in June (Figure 2.7 and 2.8). On SGWA, captures of blue- spotted salamanders were high in both May and July, while they peaked on private lands in May (Figure 2.7 and 2.8). Eastern tiger salamanders were primarily captured on SGWA in July (83 out of 87 captures) (Figure 2.7). Total captures in 2005 were greater than in 2006. A total of 2,530 individuals were captured in 2005 resulting in 2,507 individual amphibians and 23 individual reptiles. A total of 1,880 individuals were captured in 2006, resulting in 1,872 individual amphibians and 8 individual reptiles. As with the overall captures, wood frogs were captured in the greatest numbers in both 2005 and 2006. In 2005, wood frogs made up 45% of all captures (1,145 individual captured) followed by green frog (493 individuals captured (20%)), and eastern American toad (430 individuals captured (17%)) (Table 2.12). In 2006, wood frogs made up 64% of all captures (1,880 individuals captured) followed by eastern American toad (440 individuals captured (23%)), and green frog (67 individuals captured (4%)) (Table 2.12). When eliminating trap data influenced by temporary individual trap closures due to flooding and differences in trap nights in a given year, there was a standardized catch per array effort of 263 animals per 100 array nights (when pooling years). When examining within years, there was a standardized catch per array effort of 285 animals per 100 array nights in 2005, and a standardized catch per array effort of 240 animals per 100 array nights in 2006. In determining relative abundance, only area-time constrained 61 000300 0000000000 050.0000 000 0000000030 000 .0000 0000.0. .0000 20,300 00000 00000 £00 00000 0000 008000 00 00000 ooom 000 moom 000E030 E 00wEBE .30 00000000 003010 0000050 08. E 5008 .3 0 .00 03000000 0030.0 0.0000000 00“ 00 0000000 0000000000000 00 000000000 0200000 0002 .0.m .wE 00.000w «We? 6 $00 0 69 av 00.9 0/9 9 o 9 .0 9 ‘9 a o. a. «a o... go. we 9., I... e. e9 a. e. we 9v v9 9/ 9) 9 90. 10 v9 00. 9 o. 10 vol .0 e f 09 a 00 9.. 0 v... e b 07 no a; o 99 9% we 09 20 V». 9/ «0 90 no 96v 00 we 00 1% III 09 JV IV .10 . IV V0 47 W0 900/. 00' Th. 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B u . no .3. 0.0 68 0000000000 00000 0wE 000 000 5000000000 00000000 0000? 00000000000 000000-000 000 00000000000 00w0 0000000 .00 000000000 000 0:3 AmdAv 0000000000 00000 0&3 000 AmmAv 0000000000 .00 0000000000 0E0 003 00000 000 0000000 000000m 00000000 000000000 0000-00.00 000 0000000030 000 .0000 000000 .0000 00000 003 000000 00000 500 0000.0 0000 0000000 00 00000 000m 000 moom 00000000 00 0030002 00 000000000 00300 00000000 000 00 000.000 000 000 0000000005 000000000 00000 0000000 m0m00> 0000000000 0000000 00 000000000 .N0.N .wE 0000000000 .00 00000—0000 on we ow mm om mvowmm om mm ON .39 m 0___0 _ _ h. _ _ _ 0. web 000.0% x A 0000000200 000.000-00.00 I o o v 00 00000000 0.00 .000 r wd 0 0 . < 0 0000000200 00w: 0.0000000 0 000000 E00000 F m. _‘ aaucpunqv uuaw web 0003 69 Widespread species such as the wood frog, eastern American toad, and green fi'og were more abundant. Less frequently occurring species such as Butler’s garter snake, northern red-bellied snake, eastern milk snake, and common snapping turtle were less abundant. Red-backed salamanders and especially eastern tiger salamanders were exceptions to the rule: they had high mean abundances, but occurred infrequently. Species Diversity The Shannon Index of Diversity ranged from an index value of 0 (low diversity) to an index value of 1.74 (higher diversity) and the Simpson Index of Diversity ranged from 0 (low diversity) to an index value of 0.80 (higher diversity) (Table 2.13). The mean Shannon Index of Diversity for the 82 sites was 0.83 (i 0.05 SE) and the mean Simpson Index of Diversity was 0.43 (d: 0.03 SE). Species diversity was higher on private lands (mean Shannon Index of 0.86 i 0.06 SE; mean Simpson Index of 0.45 i 0.03 SE) than SGWA (mean Shannon Index of 0.79 i 0.08 SE; mean Simpson Index of 0.4] :t 0.04 SE). Species diversity differed between years and was significantly higher during 2005. In 2005, the Shannon Index of Diversity ranged from an index value of O to 1.74 and the mean Shannon Index of Diversity for the 42 sites was 1.04 (i 0.06 SE). In 2005, the Simpson Index of Diversity ranged from 0 to 0.80 and the mean Simpson Index of Diversity was 0.53 (:t 0.03 SE). In 2006, the Shannon Index of Diversity ranged from an index value of 0 to an index value of 1.32 and the mean Shannon Index of Diversity was 0.61 (i 0.06 SE). In 2006, the Simpson Index of Diversity ranged from ranged from an index value of O to an index value of 0.67 and the mean Simpson Index of Diversity was 0.32 (3: 0.04 SE). 70 Table 2.13. Species diversity indices in the southern Lower Peninsula of Michigan based on capture data fi'om drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Site Shannon Simpson Site Shannon Simpson 1 1.17 0.57 42 1.12 0.52 2 1.52 0.75 43 0.73 0.36 3 1.30 0.66 44 1.33 0.72 4 1.32 0.68 45 1.59 0.76 5 1.15 0.62 46 0.86 0.54 6 0.76 0.37 47 0.00 0.00 7 1.02 0.58 48 0.84 0.46 8 1.02 0.56 49 0.33 0.18 9 1.36 0.74 50 0.00 0.00 10 1.31 0.67 51 0.00 0.00 1 1 1.52 0.75 52 0.00 0.00 12 0.95 0.53 53 0.00 0.00 13 0.80 0.32 54 0.28 0.15 14 1.38 0.66 55 0.07 0.03 15 0.51 0.25 56 0.46 0.29 16 1.26 0.69 57 0.95 0.50 17 0.91 0.48 58 0.84 0.49 18 1.18 0.63 59 0.56 0.26 19 1.32 0.59 60 0.75 0.42 20 1.11 0.60 61 1.39 0.70 21 1.74 0.80 62 0.60 0.28 22 1.02 0.61 63 0.65 0.33 23 1.32 0.66 64 1.29 0.65 24 0.00 0.00 65 0.61 0.25 25 0.87 0.42 66 0.99 0.60 26 0.35 0.20 67 1.04 0.55 27 1.15 0.65 68 0.92 0.42 28 0.61 0.32 69 0.82 0.37 29 0.00 0.00 70 0.80 0.47 30 0.63 0.34 71 0.87 0.46 31 0.79 0.44 72 0.39 0.17 32 0.77 0.37 73 1.15 0.67 33 0.20 0.08 74 0.82 0.41 34 0.11 0.04 75 0.37 0.17 35 0.94 0.54 76 0.90 0.49 36 0.84 0.44 77 1.06 0.55 37 0.00 0.00 78 0.82 0.49 38 0.80 0.46 79 0.92 0.44 39 1.16 0.55 80 1.36 0.70 40 0.80 0.52 81 0.54 0.27 41 0.59 0.30 82 1.16 0.63 71 Herpetofaunal Community Similarity Herpetofaunal community similarity indexes among sites ranged from 0.04 (no similarities) to 1 (absolute similarity), however none had absolute dissimilarity (with an index equal to 0. The mean similarity index for 80 sites was 0.70 (:1: 0. 004 SE), indicating that on average the sites were more similar than dissimilar to each other. I also examined community resemblance of sites within years. One site was removed from each year before calculating the resemblance matrix because they did not have any captures. In 2005, the herpetofaunal community similarity indexes ranged from 0.15 to 1 and the mean similarity index was 0.69 (:t < 0. 01 SE). In 2006, the herpetofaunal community similarity index ranged from 0.04 to 1 and the mean was 0.69 (i < o. 01 SE). DISCUSSION Species inventories are necessary for conserving and managing for biological diversity (Oliver and Beattie 1993 ), and acquiring accurate data on species richness and abundance is also an important component of conservation efforts (Gibbons et al. 1997). Data on both rare and common species should be used in making management decisions. The 22 species documented from the 82 study sites in this project represented 51% of the known Lansing sub-subsection of Ionia subsection of Region One amphibian and reptile fauna (Harding 1997). Seventy-three percent (8 of 1 1) of Anurans, 43% (3 of 7) of salamanders, 44% (4 of 9) of turtles, and 44% (7 of 16) snakes expected to be found in this area were documented. 72 I surveyed all of the Anurans that I expected. The three species that I did not observe tend to have low detection probabilities in my study area. Pickerel frogs are generally uncommon in the study area, which may be attributed to its preference for cool clear waters (Harding 1997). It is rarely detected in the volunteer-based Michigan Frog and Toad Survey (MFT S) conducted throughout southern Michigan (Genet 2004). Cope’s gray treefrog is morphologically identical to the eastern gray treefrog, and their calls can be difficult to distinguish under certain temperature conditions (Harding 1997). In my study area and throughout southern Lower Michigan, the eastern gray treefrog is more common than the Cope’s gray treefrog (Harding 1997). The northern cricket frog is very rare in Michigan, and it is the only Anuran species to have protected status in the state (Genet 2004). Severe declines in the northern extent of their range have resulted in scattered and isolated populations (Lannoo 2005). Formerly healthy populations of northern cricket fiogs in both Wisconsin and Michigan have been drastically reduced or extirpated (Harding 1997). 1 surveyed all of the salamanders that 1 expected. Life history characteristics not conducive to terrestrial sampling contributed to lack of detection for four species not observed. Mudpuppies are strictly an aquatic species that occur in permanent waters including rivers, reservoirs, inland lakes, and Great Lake bays and shallows (Harding 1997). Spotted salamanders spend most of their time in burrows underground and are rarely seen after their spring breeding season which goes from late March until mid-April (Harding 1997). Four-toed salamanders are generally rare, which is most likely attributed to the lack of suitable habitat (Harding 1997). They prefer moist woodlands in close proximity to spring-fed creeks or bogs (Harding 1997). Four-toed salamanders are 73 believed underrepresented in inventories because of their short larval period, secretive nature, scattered isolated populations, and the tendency of adult females to skip years of reproduction (Lannoo 2005). The eastern newt is aquatic as an adult and inhabits pools, ponds, wetlands, sloughs, and canals (Lannoo 2005). However, juvenile efis are terrestrial using wooded areas and movement occurs when the ground is moist, especially during rain or humid days and nights (Lannoo 2005). More species of turtles were not detected than were observed, but this was not surprising. Life history characteristics not conducive to terrestrial sampling were responsible for the lack of detection at the study sites. Common musk turtles are aquatic and rarely leave the water (Conant and Collins 1991). They inhabit a wide array of permanent water bodies including but not limited to ponds, lakes, marshes, and rivers (Harding 1997). Spotted turtles use shallow ponds, bogs, fens, tarnarack ponds, and sphagnurn seepages, and reduce their movements and basking activity during the summer months (Harding 1997). They are rare in the Great Lakes region (Harding 1997) and are listed as threatened in Michigan (Michigan Nature Features Inventory 2002). Common map turtles are highly aquatic, inhabiting and feeding in larger lakes, rivers, open marshes, and reservoirs (Harding 1997). Red-eared sliders inhabit mostly permanent bodies of water including ponds, lakes, reservoirs, swamps, and slower sections of rivers, and they rarely travel far from water bodies (Harding 1997). Spiny sofishell turtles are highly aquatic. They inhabit rivers, lakes, reservoirs, and streams; bask and forage in the water; and bury themselves in silt or soft mud (Conant and Collins 1991, Harding 1997). Lack of detection for several species of snakes can be attributed to habitat requirements and declining populations. Copper-bellied water snakes are aquatic and use 74 shrub swamps, ponds, lakes, fens, and slow moving streams, and mating takes place at basking sites at edges of ponds and swamps (Harding 1997). Copper-bellied water snakes are listed as state endangered and federally threatened (Michigan Nature Features Inventory 2002). Queen snakes have specialized habitat requirements including warm, shallow streams with rocky bottoms and an abundance of crayfish (Harding 1997). They are declining in the Great Lakes region due to their sensitivity to stream pollution, habitat modification, and siltation and agricultural runoff effects on crayfish populations (Harding 1997). Brown snakes are very secretive (Conant and Collins 1991) and spend the majority of their time underground, making detection difficult (Harding 1997). Green snakes prefer moist grassy areas such as prairie remnants, meadow and fields. They do occur in open deciduous and pine stands, corresponding to vegetation types sampled in this study, but they are declining and locally extirpated from much of the southern Lower Peninsula (Harding 1997). Central rat snakes also suffer from declining populations; they are uncommon to rare, and populations have been drastically reduced or extirpated in the Great Lakes region (Harding 1997). They are listed as a species of special concern in Michigan (Michigan Nature Features Inventory 2002). Ring-necked snakes have also suffered from population declines. This decline coupled with its secretive nature of remaining below ground or under cover makes it a difficult species to survey (Harding 1997). Hog-nosed snakes occur in a wide variety of terrestrial habitat types and oflen remain underground when they are not foraging (Harding 1997). They too suffer from declining numbers and are uncommon to rare in much of the Great Lakes region (Harding 1997). The eastern massasauga rattlesnake has been extirpated through the majority of its 75 range (Prior and Weatherhead 1994). Massasaugas prefer lowland habitats and they are listed as a species of special concern in the state of Michigan (Harding 1997). To ensure accurate and all-encompassing species inventories, more extensive sampling should employed to increase the likelihood of capture for the approximately 50% of species not detected by my surveys. To ensure accurate inventories, a variety of sampling methods in varying habitats needs to be employed because effectiveness of different methods varies even between closely related herpetofauna species (Gibbons et al. 1997). To accurately assess the herpetofaunal community, it is important to use several different survey techniques to take advantage of the various life history strategies and detection phenologies. In particular, I observed different survey results between frog call surveys and pitfall traps even though they were conducted in the same vicinity. Wood frogs were underrepresented during the call surveys because they have a short calling window during their 6 to 14 day breeding season in late March to early April (Harding 1997) and many sites were not sampled during this period. However, they were the most abundant species captured (2,342 individuals captured). Eastern gray treefrogs were heard more frequently than captured because of their climbing ability which enables them to escape from pitfall traps and drift fences (Dodd 1991). Because wetlands were not specifically targeted during captures and because bullfrogs are closely associated with larger, more permanent bodies of water (Kolozsvary and Swihart 1999), bullfrogs were only encountered during the frog call surveys that sampled larger permanent wetlands. Because my study focused on terrestrial sampling and aquatic sampling techniques such as hoop traps and minnow traps were not utilized, most aquatic species of amphibians and reptiles were not observed or were underrepresented in this study. 76 Managers should employ target searches for species that are declining or naturally rare or they may need to develop long-term monitoring programs. The scale of sampling that I undertook required a considerable amount of effort, time, and funding. Most managers do not have the fimding or the personnel to ensure comprehensive detection of all species. Species-specific detection probabilities most likely vary by month and ownership which further complicates survey efforts. Understanding species-specific detection probabilities would help managers estimate the amount of effort required to document a species occurrence. Therefore, my results should be considered a snapshot of the potential species in the ecoregion. Future studies could focus on the species that were not detected and on calculating detection probabilities. It is common for species with high mean abundances to occur at high frequencies of occurrence (Brown 1984). I found evidence to support this relationship with the commonly occurring species like wood frogs, eastern American toads, and green frogs. Eastern tiger salamanders were found at relatively high abundances, but only occurred at five sites. Out of those five sites, 82% (71 of 87 captures) were from one site. The sampling site was randomly placed between two vernal ponds and was likely located in optimal habitat for eastern tiger salamanders which depend on access to permanent and semi-permanent water bodies (Harding 1997). The high abundance of Eastern tiger salamanders at relatively few sampling sites suggests that some populations are highly localized and as such, true random sampling may not be the most efficient sampling approach for some species. Due to their aquatic habitat requirements, secretive nature, or declining population numbers, other species with low frequencies of occurrence such as Butler’s garter snake, northern red-bellied snake, northern water snake, and eastern milk 77 iii 4 snake were probably anecdotally sampled and therefore their population-habitat relationships are not accurately described by the data. The herpetofaunal species pool is similar throughout the ecoregion sampled in this study. The study was purposefully designed to reside in one ecoregion so that the herpetofaunal communities would be similar; and thereby giving me a better chance to detect ownership or habitat effects. Therefore it is not surprising that herpetofauna community similarity among sites was more similar than dissimilar. My results confirm that I was successful in removing across ecoregion variability from analyses. Similarities occur because I had the potential to observe the same amphibian and reptile species across all of my sites. Although some sites were more dissimilar fiom one another, they most likely reflect the instances when rare or under-sampled species occurred. Comparisons between Land Ownerships Although, the herpetofaunal species pool is the same throughout the ecoregion, my results revealed different patterns of abundance and occurrence between land ownerships. Overall, more species were detected on SGWA including Blanding’s turtle, painted turtle, common snapping turtle, Butler’s garter snake, and northern red-bellied snake. Three species were located solely on private land including the eastern box turtle, northern water snake, and eastern milk snake. However, all of these unique species were sampled in low numbers, regardless of land ownership. The disparity between species observed on SGWA- versus private lands is most likely attributed to life history requirements, and the difficulty of efficiently sampling these species. Herpetofaunal communities as a whole were similar between ownerships with average richness and 78 amphibian composition the same for SGWA and private lands (4.6 (:1: 0.36 SE) vs. 4.4 (:1: 0.28 SE)). Both SGWA and private lands had similar species occurrence patterns with eastern American toad being the most ubiquitous followed by wood frogs; however, both of these species occurred more frequently at private sites. Mean abundance of individual species differed on SGWA and private lands. For both land ownership types, wood fiogs followed by eastern American toad were the most abundant. Wood frogs were more abundant on SGWA and eastern American toads were more abundant on private lands. On SGWA, spring peepers and red-backed salamanders were more abundant than the next most abundant species on private lands (green fi'ogs and northern leopard frogs). Differences in abundances of individual species between SGWA and private lands are most likely related to species-specific life history requirements, habitat conditions and availability, micro-site conditions as well as environmental conditions. For example, wood frogs and blue-spotted salamanders are highly dependent on vernal ponds in wooded areas of Michigan. If one of the ownership types tended to support more vernal ponds in the vicinity of the sampling sites, it could have an effect on wood frog and blue- spotted salamander relative abundances. Comparisons between Years Although, the herpetofauna species pool is similar throughout the ecoregion, my survey also revealed different patterns of incidence and occurrence among years. Temperature and precipitation are critical to amphibians (Carey et al. 2001) and these weather factors vary from year to year. Herpetofaunal breeding is initiated by a response to increasing temperatures and rainfall (Stebbins and Cohen 1995), and temperature and 79 rainfall also affect the hydroperiod of a wetland (Pechmann et a1. 1989). The number of herpetofauna using a particular wetland in a given year is a function of the wetland hydroperiod which can vary annually (Pechmann et al. 1989). Therefore, the number of species occurring at a given site is partially dependent on the type of wetlands in the surrounding landscape and the hydroperiods of these wetlands. For example, wood fro gs are explosive breeders. If certain areas within the ecoregion during a given year received more early season rainfall that resulted in a longer hydroperiod for breeding ponds, this would create conditions favorable for tadpoles to completing metamorphosis. As a result chances for individual survival are increased. In 2005, I observed warmer temperatures at my sampling sites, which could have contributed to the greater species richness. The average temperature for the 4 sampling periods was obtained for each sample site location from the closest weather station distributed through the ecoregion. Seven species were observed only in 2005 and all were reptile species (Blanding’s turtle, painted turtle common snapping turtle, Butler’s garter snake, northern water snake, eastern milk snake, northern red—bellied snake). The discrepancy between species observed in 2005 versus 2006 is most likely a combination of factors including temperature and precipitation differences, life history requirements, and the difficulty of efficiently sampling these species in terrestrial habitats. My results suggest climatological differences played a role in my characterization of southern Michigan herpetofaunal communities. Overall, individual species abundances were greater in 2005, and 658 more individuals were captured in 2005. The majority of captures were Anurans, and of these Anurans, most were juveniles. Here again, more favorable weather conditions could 80 have triggered earlier breeding seasons for these species resulting in more tadpoles completing metamorphosis before vernal pools dried and as juveniles, they dispersed through terrestrial habitat. Species diversity was greater in 2005, but this was not surprising. Diversity indices take into account species richness and abundance. Because I observed more species in 2005 and abundances of these species were greater, the average diversity index was higher. My study was successful in sampling the targeted terrestrial species and documented the majority of terrestrial species expected to occur in the study region. Because accurate information on basic life history characteristics are needed to conserve species, my research demonstrates the difficulty in surveying complete species assemblages, particularly for uncommon species or species with specialized habitat requirements. There is variation in herpetofauna populations fiom year to year and therefore basing management policies on short-term studies could result in misleading conclusions (Dodd 1994). Amphibian abundance fluctuates with regard to environmental conditions such as rainfall and hydroperiod (Pechmann et a1. 1989). Long-term studies at Savannah River Site National Research Park (SRS-NEP) of turtle populations in wetlands have shown that population rates changed annually in relation to fluctuating water levels (Gibbons et al. 1997). Turtle densities were high in years of high water levels and wet conditions and densities were low in years with limited water (Gibbons et al. 1997). Therefore, it is important to present study results in the context of environmental conditions over which the data were collected, especially since funding and personnel are usually only available for short-term studies. During the two year sampling period that I conducted my research, I documented over half of all the species known to historically 81 occur in the ecoregion. My research will give the MDNR a solid knowledge base of the herpetofaunal community in the study area and can be used as a foundation for further research. It is essential to look at the local and spatial environment associated with herpetofaunal communities to determine underlying relationships among sites, land ownership types, and between years. Describing herpetofaunal communities in this context is necessary to guide natural resource management. Also, understanding the distribution and abundance of herpetofauna in the context of site and landscape-level variables is fundamental to conserving and managing for biological diversity. The lack of basic understanding in abundance and distribution of herpetofauna, as well as of many other taxa, complicates management and conservation efforts. 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2282.205... 00.0 2.0 082 2282.222... 000 00 082 2280.08... 2.2 00 082 228238.... 00.2 00 082 2282205... 02.0 2.0 082 2282208... 00.0 00 082 802208... 02.2 00 082 228.2208... 00.2 00 082 2282.25. 00.0 2.0 082 228205... 00.0 00 2.82 2282.282 02.2 00 082 082.208... 00.2 00 082 22822222.... 00.0 2.0 2.82 5.022222 02 .0 00 2.82 22822222... 02.2 00 082 30202222.. 00.2 00 082 502225. 00.2 2.0 0002 2.82225. 00.0 00 2.82 802225.. 02.2 00 082 22820222... 002 00 2.82 2200220222... 002 2.0 002 22822222 208022 022282 2022.00 2825 20822 02.25 0250200 222225 2220203 .50 22202 825228 2220203 2>0 08072 22082228 2220203 2>0 0802 22022288 2220203 2>0 082 2202222228 2.0000 2.0 020222222... 92 and 2m 2002 5002.203 oo.~ on 20002 22002022. ovd om 2009 500202.52. oo.~ mm 009 5002208222 end 5 2008 2302.58.42 end On 203 2200220250 omd om 39 22.002.208.00 oo.~ mm 2002 28.220250 end 5 2009 0200208222 ofiu on v09 2802.205 S .N am 2002 280202.220 82 mm 2009 22002208220 om.~ : 2009 9002208202 own on 2009 28020252. 2 .N on 008 22002208220. 9: mm 0002 2200220822.. omd 2m 909 50208.0. ou.~ on 209 502.2092. cod am 009 2200202322 00.2 mm 2002 220020820. 0 2 .N 2 m B28 2002.—0822.. end on 209 500208.22. 82 am .009 2802.20.50. om .2 mm 282 220022022. 2 .N 220. 20002 5002.20.02. and on “208 2802.20.22. 8.. on 22.52 200220820. om; 0m 209 2282.20.25. oo.~ 2m 209 220020822. ofim on 2082 2200220820.. 00.2 am 20002 280220820. 02... mm 2008 2200220222.. cod 5 2202 080.2022. 2 .N on 202 200203 ow; mm 2082 280202922. on; mm @002 220022022220. om; 2m 2009 2200202220 oo.~ on 008 200208.22. ow; on 2009 2802208222. o~._ mm 209 222002.223. 022 R 2009 502,208.20 oo.~ on 2008 502,208.02 on.— om 2209 50:08.2... om; mm 2082 22002208222. 2: 2m 39 500220820. so; on 229 5002082.. 2..— o~ 2009 502202.52. oo.~ 0m 209 500220252. 8.2 2.0. 2008 230208222 cm; on 2009 802.2023. 2... am 2008 9002208420. Sum 0m @209 220.02.208.02 and cm 003 22002023.. or: on 909 500220290. 022 am 2003 2200220252. onN R 208 2200.20.90. 8% cm 2008 502.2022. 00.2 on 2208 2200220290. om; am 20208 22002208222. mod 0m 202 50208.4. and on 909 50.208222. 8.2 on 2082 280220222. om; am 209 2200220250. cod pm 20208 500220820. and on 39 90020250 00.2 on 209 50022025.. omd 0.0. E02 2282.20.52. cod 0m 208 28020820.. om.m om 208 982.2084 c: om 082 2200220820.. ow.~ mm 2009 228220250. om.~ R 209 28020822.. cud om 38 3020820. 9.6 am 2082 22.002.208.20 owd mm 2009 280220280. Pad 2 209 22820822.. 2 .n on 2008 22.002.208.20. o_.m on 2008 500220222. Sum mm 002 28020050.. Sam R 20002 50208.0. cod cm 0202 0200202220 cod am 008 2200220822.. oo.~ mm 2082 220020820. ovd R 0002 22002208222. cad on 20229 0802.20.02. cod am 2008 2200220822.. 8.“... 0.0. 2009 22002208202 omd R 2002 2200220250 oa.~ on 2009 220020252. cod an 2082 0200220820. end mm 0002 2200220222. omd 0m 982 280220820. cad om 39 280202.922. cod on 0002 220020222 ov.~ mm c208 220020222. 2 .N R 0002 228220222. 8N on was 9002.20.32. cad mm @208 2220020250 ovd mm 982 50020252 no.2 R 082 502.2022. end on 2009 502.2084 mud mm 2082 220020252. omd mm 202 22200220050. co; 0m 209 500208.22. oo.~ cm 2008 50208.00 cod am 2009 0200208220 c 2 .N mm 009 500220222. ow; R 202 5002.20.22.00 cod on 209 280208200 end am 008 500220820. 8:0. mm 2009 52.202520 ow; 0.0. 2008 2220020822.. cod on 2003 520208.22. ovd am 2009 800208.00 oo.~ mm 2209 50020822.. 2..— nm 2002 2200220820. 208022 222222 208022 222280 2022222 222225 208022 02225 3303 A>m 0802 288800 320? 15m 0802 2202:2280 222203 2>m 0802 2208800 2.2203 A>m 0802 2882.280 2.228 2.0 020522222. 93 26 mm 009 809.2080. cad 0m 009 800208.220 Sam 0m 009 8000208220 ohm mm 009 2200020820.. 2 .n mm 009 800208.20 36 on 009 800208200 0nd 0m 009 809208.20. own mm 009 809208.00 omé mm 009 80920820. cm...” on 009 800020820 om.m 0m 009 80020820. om.m mm 009 800.2080. and. mm 009 800208.00 Sam on 009 80020822.. 00m 0m 009 809208.00 o_ .m mm 009 2200208222. 3.0 mm 009 800208.00 ova 0m 009 800208220 end 0m 009 8002208200 ood mm 009 200208.22. 8.0 mm 009 80020822.. and on 009 809208222. own 0m 009 220002080. cod mm 009 2002080. on;. mm 009 8002080. 3.6 m m 009 2209.88.20 on. m 0m 009 000208.20 cod mm 009 220920820. ové mm 009 809.2080. cod m m 009 80020822.. 2 .m 0m 009 800208.220 an .N mm 009 220020820. omé mm 009 8002080.. cod mm 009 2200020820 oo.m 0m 009 22002082220 omd mm 009 2200220822. 8.0 mm 009 22.002.208.20 8.0 mm 009 80020822.. owd 0m 009 22002208402 om.m mm 009 2209208400 ova mm 009 809208.220 90.0 m m 009 2200020820.. on .20 m m 009 22000208420 oo.~ mm 009 2200220822.. 9.6 mm 009 809.2080. omé mm 009 800208.220 ooé mm 009 0002080.. 00.2 mm 009 209208.00 and 0m 009 80020820. A: .0 mm 009 0002.205 cod mm 009 8000208200 own 3. 009 200.2080. O06 0m 009 800020844. ooé mm 009 809.2080. 02m mm 009 2200208220 c— .m _m 009 220022080. om.n 0m 009 809.2080. 22.0“ mm 009 800208222V and mm 009 800208.00 cod 3 009 220022080. cod 0m 009 2200208202 Sum mm 009 800208.02 o~.m mm 009 800208.202 own 20. 009 220002080. 2.0 hm 009 809.2080. cod mm 009 8002208220 cod mm 009 800220800 00.0. S 009 8002082.. 90.0 nm 009 809.2082 2mm mm 009 2200220820. om.~ mm 009 220020820. 02m 3 009 22002084.. 8.0 hm 009 809.2080. oc.w 0m 009 800208220 00.2 mm 009 2209208220 oflm 2m 009 22002208200 22m 0m 009 809208202 2% 0m 009 220020800 end mm 009 800208.222 02 .m _m 009 809.2080. 02m 0m 009 809.2080. 02 .m 0m 009 8092082220 ooé mm 009 2209208220 0 2 .m 2 009 2200220820.. cs. 0.0. 009 809208.222 2 .m 0m 009 2209208220 cad mm 009 80920820. 02 .m _m 009 809.2080. 8.0 on 009 800208.00 cod 0m 009 220920802 owd mm 009 809208.00 cod 3 009 2200208202 and on 009 80920800 co... 0m 009 2.09.2080. ow...” mm 009 220920824. oo.~ 2m 009 8002080. 00.0 cm 009 809208.00 om... 0m 009 800208.220 own mm 009 809208.202 2am _m 009 2200220820. Om.m 0m 009 2200208222. 3.0 0m 009 200020250. ova mm 009 2200020820. 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8203 A>m 0802 808800 8.80 2.8 8200800. 116 02.8 08 Jmob 083 08.8 08 mob 083 02 .8 08 Lmob 083 082 08 8b 083 00.8 08 mob 083 00.8 08 mob 083 02.8 08 mob 083 082 08 mob 083 00.8 08 mob 083 00.8 08 mob 083 02.8 08 mob 083 082 08 mob 083 00.8 08 mob 083 00.8 08 mob 083 02.8 08 mob 083 082 08 mob 083 08.8 08 mob 083 00.8 08 mob 083 02 .8 08 mob 083 082 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 02 .8 08 mob 083 82 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 02.8 08 mob 083 082 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 00.8 08 mob 083 82 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 00.8 08 mob 083 002 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 00.8 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 00.8 08 mob 083 00.8 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 00.8 08 mob 083 00.8 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 00.8 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 002 08 mob 083 02 .8 08 mob 083 08.8 08 mob 083 08.8 08 mob 083 002 08 mob 083 00.8 08 mob 083 08.8 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8803 4>m 0802 808800 8803 q>m 0802 008800 0.80 2.8 8.2022qu08 119 120 02.0 88 mob 083 08.0 88 Job 083 08.8 88 mob 083 08.8 08 mob 083 00.2. 88 mob 083 8.0 88 mob 083 08.8 88 mob 083 00.8 08 mob 083 00.0 88 mob 083 08.2. 88 mob 083 08.8 88 mob 083 08.8 08 mob 083 00.0 88 mob 083 8.0 88 mob 083 08.8 88 mob 083 00.0 08 mob 083 00.0 88 mob 083 82. 88 mob 083 08.8 88 mob 083 08.2. 2.8 mob 083 00.2. 88 mob 083 08.2. 88 mob 083 08.8 88 mob 083 8.0 08 mob 083 00.8 88 mob 083 00.2. 88 mob 083 08.8 88 mob 083 00.0 08 mob 083 00.8 88 mob 083 00.0 88 mob 083 08.8 88 mob 083 08.0 08 mob 083 00.8 88 mob 083 00.0 88 mob 083 08.8 88 mob 083 02 .2. 2.8 mob 083 08.8 88 mob 083 08.0 88 mob 083 00.8 88 mob 083 00.8 08 mob 083 08.8 88 mob 083 08.0 88 mob 083 00.8 88 mob 083 00.8 2.8 mob 083 08.8 88 mob 083 08.0 88 mob 083 00.8 88 mob 083 00.8 2.8 mob 083 08.8 88 mob 083 08.0 88 mob 083 08.8 88 mob 083 08.8 08 mob 083 08.8 88 mob 083 88.2. 88 mob 083 08.8 88 mob 083 08.8 08 mob 083 08.8 88 mob 083 08.2. 88 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055 885880 8280 288mb 800 288882 02225 3303 A>m 0802 008800 8303 15m 0802 808800 8303 4>m 0802 008800 228203 A>m 0802 008800 8.80 2.8 8200800. 121 122 08.8 82. mob 083 08.8 22. mob 083 08.8 02. mob 083 08.8 82. mob 083 08.8 22. mob 083 08.8 02. mob 083 02.8 82. mob 083 2.2.8 22. mob 083 08.8 02. mob 083 08.8 82. mob 083 00.8 22. mob 083 00.8 02. mob 083 08.8 82. mob 083 00.8 22. mob 083 00.2. 02. mob 083 08.8 82. mob 083 00.8 22. mob 083 00.2. 02. mob 083 08.8 82. mob 083 00.8 22. mob 083 08.2. 02. mob 083 08.0 2.0 mob 083 08.8 82. mob 083 00.8 22. mob 083 8.2. 02. mob 083 08.8 2.2. mob 083 02 .8 82. mob 083 08.8 22. mob 083 82.2. 02. mob 083 02.8 2.2. mob 083 00.8 82. mob 083 08.8 22. mob 083 00.2. 02. mob 083 00.8 2.2. mob 083 08.8 82. mob 083 08.8 22. mob 083 08.8 02. mob 083 08.8 2.2. mob 083 08.8 82. mob 083 08.8 22. mob 083 08.8 08 mob 083 02.8 2.2. mob 083 08.8 82. mob 083 02.8 22. mob 083 08.8 08 mob 083 02 .0 82. mob 083 08.8 82. mob 083 02.8 22. mob 083 08.8 08 mob 083 00.0 82. mob 083 02.8 82. mob 083 08.8 22. mob 083 08.8 08 mob 083 08.8 82. mob 083 08.8 82. mob 083 08.8 22. mob 083 08.8 08 mob 083 02.8 82. mob 083 00.0 22. mob 083 00.8 22. mob 083 00.8 08 mob 083 08.8 82. mob 083 00.8 22. mob 083 00.8 22. mob 083 08.8 08 mob 083 08.8 82. mob 083 02.8 22. mob 083 00.8 22. mob 083 08.8 08 mob 083 08.8 82. mob 083 08.8 22. mob 083 00.8 22. mob 083 02.8 08 mob 083 08.8 82. mob 083 08.8 22. mob 083 08.2. 22. mob 083 08.8 08 mob 083 00.8 80 mob 083 02 .8 22. mob 083 02.8 02. mob 083 02 .8 08 mob 083 00.8 82. mob 083 02 .8 22. mob 083 08.8 02. mob 083 02 .8 08 mob 083 08.8 82. mob 083 00.8 22. mob 083 00.8 02. mob 083 02 .8 08 mob 083 08.8 82. mob 083 08.8 22. mob 083 08.8 02. mob 083 02.8 08 mob 083 00.8 82. mob 083 08.8 22. mob 083 02.8 02. mob 083 02 .8 08 mob 083 00.02 82. mob 083 08.8 22. mob 083 08.8 02. mob 083 00.8 08 mob 083 08.0 82. mob 083 08.8 22. mob 083 02.8 02. mob 083 00.8 08 mob 083 08.0 82. mob 083 08.8 22. mob 083 08.8 02. mob 083 00.2. 08 mob 083 282282 2280 282582 00202 @882 22282 282823 202202 2228203 2>8 2002 88.08 222m2o3 .58 8282 88280 222m2o3 .58 8282 82880 222803 2>8 282 820280 2.80 2.8 8202280.... 8.0 on 20022080208 .8»: 8080.2 3.0 we 2028080208 002208280825 oo.~ 82. 2008080208 2802208280825 who on 2028080208 20w: 8080.2 08.8 00 2028080208 00220080225 omgm 3. 2028080208 002008-028.— ond om 0028080208 20w: 883m 38. 2.0 2000080208 003008-005 omd 9. 20022080208 002208280225 22 0.0. 2028080208 20w: 80280m 08....” 80 202228080208 002208280825 08.2 N2. 20022080208 00220080225 82 am 2028080208 20w: 80280m 2.8 we 2028080208 2802208280225 om.~ 22. 2028080208 00220080225 00.0 mm 2028080208 bowa 80283 omd Nb 20022080208 00220080225 00.2 22. 2028080208 002.008-0225 00.0 mm 2028080208 20»: 80280m 8.8 20 2028080208 2802208280225 02.8” 02. 2028080208 00220080225 $6 08.. 8028080208 20w: E02m0m one o0 2028080208 00220080825 cod o0 2000080208 00220080225 owd 0N 8028080208 2082 8080m— omé 08 2028080208 00220080225 00.2 9. 2028080208 2002208280225 08.0 mm 0028080208 2082 802800 cod 00 202822080208 002208280225 9.2 9. 20022080208 00220080225 owd om 2028080208 Emu E0280m 8.2. cc 2028080208 008008-005 00.2 on 2028080208 002008-005 owd 0.0. 2002080208 2032 8080”.“ 00.0 08 2000080208 00220080225 cod mm 0008080208 000008-005 o8..o om 8008080208 20w: 80280m 00.2. on 2000080208 00220080225 08.2 8.2.” 20022080208 00220080225 88.0 0.0. 2028080208 20w: 80280m om.m mm 20022080208 00220080225 02.2 88 2028080208 2002208280225 086 mm 20022080208 20w: 80200.82 2: .2. 88 2008080208 00220080225 0: 8.8 20022080208 200220080225 86 mm 2028080208 .2082 80200m cod mm 2028080208 00220080225 08.0 88 2000080208 2202208280225 owd mm 2028080208 20w: 8200mm om.m mm 2008080208 00220080225 08.2 08. 2028080208 00220080225 oho mm 2028080208 20w: 8080.2 00.2. 28 2028080208 00220080225 02: mm 2000080208 2802208280225 006 mm 20022080208 20»: 80280m 03. 28 2028080208 2002208280225 22.022 mm 2000080208 2002208280225 Euo 8.8 2008080208 20»: E0280m 00.2 3 2028080208 00220080225 08.2 2.8 2028080208 00220080225 cod 80. 20228080208 20»: 8280”,. own 08 2028080208 2002208280225 32 28m 2028080208 200220080225 00..0 80. 2028080208 20m: 80280m 08.2. on 2028080208 00220080825 02 .2 on 2028080208 00220080225 00.0 mm 2028080208 2032 80280.82 00:0. 08 2028080208 00220080225 00.8 0N 2028080208 00220080225 08.6 mm 8028080208 2082 80280882 088 02. 2028080208 00220080225 8.0 mm 2028080208 00220080225 00.2 mm 2000080208 20w: 8080M o2..m 82. 2028080208 0022008005 cod R 2028080208 00220080225 cod on 20022080208 008008-005 end 82. 2028080208 00220080225 08.0 mm 2008280208 00220080225 ohm 2 8 2028080208 0080080225 cod 5. 20022080208 002.008.0225 end S 2028080208 2002208280225 cod 00 2028080208 008008-005 00.8 82. 2028080208 2802208280225 00.8 n 2000080208 2002208280225 Ang 2882 288023 2882 2880.23 2882 223203 A>m 0802 008800 282303 4>m 0802 008800 222303 q>m 0802 8208800 .8008 000 8008 02 00822222 20 0282888082 0304 802.2808 08 8 00.8800 82028080208 20 22.8203 280 3.2/m2 Ewan: 80> 02 80:82 8808088002 .N.N 8820220098.. 123 owd mm 202022080208 200020022602 om2 02 2028080208 2200200822202 cod mm 2028080208 20w: E0280m on .2 2.8 2028080208 2000200226022 02.0 02 2028080208 000200822032 36 mm 2028080208 20022 80280.82 8.2 mm 2028080208 2008200822832 9:. 2. 2028080208 2200200822032 0 2 .2 28 2028080208 20m: 80280m2 00.0 mm 802822080208 2800200222202 222 .2 2. 2028080208 2008200222002 o 2 .2 28 2028080208 20022 802800 08.0 88 202022080208 280020082602 00.82 80 2028080208 20022 802800 00.2 28. 2028080208 0022 80280.82 omd 2m 2028080208 2208200822032 228.2 cm 202222080208 20022 8080M 00.2 28 2028080208 20022 820m 00.2 28 202022080208 22002008222002 228.2 on 2028080208 20022 8080M cod 2 202022080208 20022 80280m2 00.0 2m 202022080208 2800200822832 3.2 R 202022080208 20022 8080M cod 2 2028080208 20822 80280m2 08.0 2 n 2028080208 2200200822002 08.2 on 202222080208 80022 80280m2 cod 2 n 2028080208 20022 80280m2 and 2m 20200080208 2000200222802 082 on 2028080208 20w: 80280m2 00.0 28 202822080208 208: 8080.2 end 08 2028080208 2200200222002 002 mm 2028080208 0022 80280m2 cod 2 2028080208 20022 80280m 9.6 on 2028080208 2800200222032 2282 2.8 2028080208 20022 80280m cad 28 2028080208 20022 838m end cm 2028080208 2200200822002 32 3“ 2028080208 20w: E02832 mwd 2m 2028080208 20»: 802800 2.0 0.0. 2028080208 2000200822232 o 8..o 2.8 2028080208 0022 80280.22 owd 2 2028080208 20w: 80280m2 00.0 R 2028080208 280020082632 00.0 2.8 2028080208 0022 80280.82 08.0 28 2028080208 20022 8080M 02 .0 08 2028080208 2800200222832 08.2 mm 2028080208 20w: 8080M and 2 2028080208 20w: 80280m2 00.0 mm 2028080208 2002008260282 82 mm 2028080208 0022 80280.82 00.0 28 2028080208 0022 80280.82 omd mm 2028080208 2208200822032 8.2 mm 2028080208 20»: 802800 08.0 28 2028080208 20022 802800 omd mm 2028080208 2800200260282 no.2 mm 2028080208 20m: 80280m cod 28 2028080208 20022 8080M omd 2.8 2028080208 2000200222232 002 mm 2028080208 80022 802882 and 28 2028080208 20022 80283 222 .o 2.8 2028080208 2000200222032 002 mm 2028080208 20w: 8080.2 08.0 28 2028080208 20822 80280182 omd mm 2028080208 2000200222832 002 mm 2028080208 20w: 802800 82 08 2028080208 20022 80280m2 omd mm 2028080208 288200822232 cod mm 2028080208 .2082 8080.2 8.2 om 2028080208 20w: 80280m2 omd mm 202082080208 200020082632 08.0 mm 2028080208 20m: 80280m2 00.2 on 2028080208 20w: 80280.22 02 .0 mm 2028080208 2800200822232 owd mm 2028080208 20w: 802m0m2 00.2 on 2028080208 20022 802800 00.0 mm 2028080208 2000200822832 88.6 mm 2028080208 20w: 80283 00.0 on 0028080208 2002 820m and 2N 2028080208 20082002632 00.0 mm 2028080208 20022 8200M 08.0 on 8028080208 20022 802m0m cod on 2028080208 20002008260282 cod mm 2028080208 200.22 802m0m 08.0 on 2028080208 20022 888m 28808222 2222022 282220.202 222282 282882 222225 8303 2.2/m 0802 2208800 222203 2>m 080 2 008800 222303 2>m 080 2 008800 2.80 .8.8 8200802. 124 08.2 82. 28.202202222222228. 082822-000 08.2 82. 2002202220208 082822000 02 .2 NV uoCCMEMEm voxomnufiom Owd NV hoUGmEQEm UmXownufiomm on; —V 202082922228 Coxoanévomm 0N2 2V 209205223. onomfiuvvm 00.2 _V 202088222me onomnu—vom o0; OV 206220222323 fioxomnufiom 0V2 OV hofiGQEBQm CoxomDAuvM Om; OV 220508me Coxownufiom 08.2 28 20022022202228 082822-032 08.2 08 2002282220208 082822000 082 02. 28222222222208 082822-032 02.2 08 2002202228288 002822-032 on .2 8.2. 2028080208 2200200822202 002 on 2028080208 2000200826002 082 82. 20022222220208 092822-88 00.0 08 28022222222282 082822-032 ON; 0V hoUGdEw—mm fioxomnufiom 00.0 On 20202.88me fioxomnufiud 08.2 82. 20022022202228 082822000 002 88 20022022222208 082822-088 08.8 2.2. 20022222220208 082822-032 08.2 88 2002282220208 082822-008 08.2 2.2. 2002202228208 032822032 002 88 20022222220208 082822-080 Om; VV uowfimeEm toxoannfium God mm 202356—280. quomnufivm OMA VV 2Dficmegwm fioxomnufiom Omd mm newsman—mm 2082028822001 082 2.2. 200222222202228 082822-002 08.2 88 200220222222228 082822-008 ONA VV 200888228 fioxomnnfiod 02 .2 5m HOUGQEEMm fivfiomnnvom 82 2.2. 2028080208 2800200222802 2.6 nm 20022080208 20002008220002 00.0 2.2. 200222222282228 082822-032 00.0 88 2002202228222.2 0022822008 00.0 VV uofifimamfiw @oxowaumfim 05.0 cm 2302228222030. woxomnnwom 08.2 82. 200222222222208 082822032 002 88 20022222220202 082822-032 08.2 82. 2002202220208 082822-032 082 88 2002202220208 082822032 02 .2 82. 222022822222288 082822-032 08.2 88 2002202220208 082822-032 28222082 22222222 28222882 22222222 2822202822 22222222 222m203 2>8 0222222 8222280 222m2o3 2.8 022202 2282280 2228203 2>8 8282 8.22280 2.80 .88 82022022222. 125 Appendix 2.3. Measurements (snout to vent length (SVL), tail length, weight, and sex) of snakes captured in the southern Lower Peninsula of Michigan in 2005 and 2006. Common Name SVL Tail Weight Sex* Comments (mm) (mm) (grams) Eastern milk snake 442 59 26.00 U Red-bellied snake 102 26 1.60 U Red-bellied snake 180 45 4.00 U Eastern garter snake 135 25 2.00 U Eastern garter snake 145 30 2.20 U Eastern garter snake 155 28 2.50 U Eastern garter snake 160 50 2.80 U Eastern garter snake 220 56 4.00 U Eastern garter snake 350 100 3.10 U Eastern garter snake 360 100 27.00 U Eastern garter snake 375 110 ------- U Eastern garter snake 410 120 32.00 U Eastern garter snake 420 110 31.50 U Eastern garter snake 435 103 63.00 M Eastern garter snake 470 145 57.00 U Eastern garter snake 480 150 36.00 M Eastern garter snake 494 116 74.00 U Eastern garter snake 500 128 59.00 U Eastern garter snake 523 124 92.00 F Butler’s garter snake 620 1 15 1 10.00 U Northern ribbon snake 195 83 2.50 U Northern ribbon snake 195 80 3.40 U Postnatal scar Northern ribbon snake 215 87 4.20 U Postnatal scar Northern ribbon snake 225 85 3.80 U Postnatal scar Northern ribbon snake 252 75 6.50 U Northern ribbon snake 330 145 14.00 U Northern ribbon snake 345 145 13.00 U *F = Female, M = Male, U = Unknown 126 2285222: u 22 .0202 u 2 022222202 u .2. 822222222222 88 88 28 88 22 0222222 02222022 022020 088 802 088 82.8 2 222222 822222222222m 8222280 02.22228 82 002 82 02 888 22 0222222 822222220228 8222280 082 882 82.8 888 2 0222222 2222200228 22822280 22222222 22222222 22222222 22222222 8808800 2.2220285 2202280222 282202 2202280222 22220285 000820.200 220022012 000820.200 880m 080 2 2208800 .8008 02222 8008 222 2208222022 2o 222228222022 20282 22822288 0222 8 220288200 8022.28 .20 22222223 220880282 280 282202 2202280222 22223 000820.200 .222w2202 000820.200 208082 82820802228002 .2..~ 8220220828220. 127 CHAPTER 3: COMPARISON OF THE HERPETOFAUNAL COMMUNITIES ON MICHIGAN ’S STATE GAME AND WILDLIFE AREAS AND PRIVATE LANDS INTRODUCTION In recent decades, much attention has focused on the global decline of herpetofauna, particularly amphibian species (Kiesecker et a1. 2001). Several factors have been implicated in recent amphibian population declines including habitat loss and fragmentation (Blaustein et a1 1994, Blaustein and Kiesecker 2002), introduced predators (Blaustein and Kiesecker 2002, Kats and Ferrer 2003), pollution (Alford and Richards 1999), increased ultraviolet B (UV-B) radiation (Alford and Richards 1999, Reaser and Blaustein 2005), global climate change (Alford and Richards 1999, Reaser and Blaustein 2005), and infectious disease (Alford and Richards 1999, Reaser and Blaustein 2005). Concern about amphibian declines is most likely due to their potential role as indicators of environmental stress (Halliday 2000, Blaustein and Kiesecker 2002, Reaser and Blaustein 2005). Amphibians use both aquatic and terrestrial habitats, and therefore come into contact with stressors in both environments (Stebbins and Cohen 1995, Blaustein and Kiesecker 2002). Amphibians have moist permeable skin and their semi- permeable eggs are directly exposed to sunlight, water, and soil (Blaustein and Kiesecker 2002). Amphibians are believed to play a critical role in ecosystem dynamics because they are the most abundant vertebrate in many forested ecosystems (Burton and Likens 1975). Their decline could have substantial impacts on other organisms by disrupting ecosystem function (Blaustein and Wake 1995, Blaustein and Kiesecker 2002). A severe population decline could have considerable and lasting effects on ecosystems potentially resulting in adjustment and restructuring of food webs of amphibian invertebrate prey and vertebrate predators. 128 Herpetofaunal communities are influenced by local habitat conditions, environmental factors, and landscape features. Local terrestrial habitat conditions that have been shown to affect amphibian species include litter depth, coarse woody debris (of various sizes and decay classes), overstory canopy cover, and soil moisture (deMaynadier and Hunter 1995). For example, amphibian species richness was positively correlated with local habitat conditions such as variables related to vegetation cover and negatively correlated with water depth in southwestern Ontario (Hecnar and M’Closkey 1998). Salamander abundance was found to be negatively correlated with increases in percent bare ground as a result of leaf litter reductions due to prescribed burns in bottomland hardwood stands in Georgia (Moseley et al. 2003). Environmental factors such as ambient temperature and water availability are critical to amphibians (Carey et al. 2001). The rate of water loss across permeable amphibian skin is dependent upon temperature, and most amphibians need a freshwater source to rehydrate (Carey et a1 2001). Amphibian’s breeding activities are initiated by response to increasing temperatures and to rainfall (Stebbins and Cohen 1995). On a landscape level, amphibians and reptiles are dependent on juxtaposition of wetlands and adjacent terrestrial habitats, as well as connectivity between the two (McDiarmid 1994). The proximity of forested patches and ponds to the next nearest pond can influence herpetofaunal communities (Knutson et a1. 1999) The majority of the southern Michigan landscape is privately owned. State Game and Wildlife Areas (SGWA) are found primarily in the Lower Peninsula of Michigan and have been designated for natural resource conservation. They are publicly held lands managed by the Michigan Department of Natural Resources (MDNR) to conserve and 129 restore the State’s wildlife resources (Application for Federal Assistance for the Michigan Department of Natural Resources-Statewide Land Acquisition Grant Oct. 16, 1998). SGWA and private lands are configured as a patch—matrix of land ownership throughout the Lower Peninsula, with private lands as the matrix and SGWA as the patches. Monitoring herpetofauna can be an effective way to understand the responses of wildlife to varying land management regimes. Herpetofauna, particularly amphibians, may provide ecological insights to enviromnental stressors such as habitat modifications and environmental change. Detecting declines in herpetofauna at the population level, given their environmental sensitivity, may indicate a loss of ecosystem integrity. Monitoring herpetofauna populations and identifying their responses to land management regimes can shape the way lands are managed. For SGWA, knowledge of herpetofaunal community composition can provide a broader context for understanding how MDNR activities, such as land acquisition and forest management, contribute to herpetofaunal conservation in southern Michigan. Preserving and managing adequate and essential habitat can limit reductions in not only herpetofaunal populations, but in biological diversity as a whole. The primary objective of this study was to describe the important determinants of herpetofaunal community structure to see if differences between land ownerships existed. This information will help the MDNR understand how their SGWA contribute to landscape-level diversity. Because SGWA tend to be comprised of larger, contiguous blocks of forested land in southern Michigan, 1 expected to find more forest dependent herpetofaunal species and greater abundances of these species on SGWA than on private 130 lands. Independent of ownership, I expected areas that received greater rainfall with warmer temperatures to contain more amphibian species and greater abundances of these species. I also expected areas in closer proximity to water bodies to have greater herpetofaunal diversity. All capture, handling, and marking protocols used in this study were approved by the Michigan State University Animal Care and Use Committee (AUF# 07/03-082—00). METHODS To assess differences in herpetofaunal communities in the southern Lower Peninsula of Michigan, sites were sampled on SGWA as well as on privately-owned parcels in the spring and summer of 2005 and 2006. Eighty-two sites were sampled on a patch level scale, and sites were selected based on three characteristics: 1) land ownership, 2) vegetation type, and 3) soil type. Site Stratification Variables Soil Associations Site locations were selected from map data using ArcGIS 9.1 (Environmental Systems Research Institute 2004). The soil information used for this map was Natural Resources Conservation Service 1994 STATSGO data for Michigan (United States Department of Agriculture 1994). STATSGO was compiled at 1:250,000, was designed to be used primarily for regional, multi-state, State, and river basin resource planning, management and monitoring, and is not detailed enough for interpretation at the county level (United States Department of Agriculture 1995). As such, 1 used STATSGO to coarsely stratify my study area into patches. STATSGO soil maps were compiled by 131 generalizing more detailed Soil Survey Geographic (SSURSGO) maps. The following soil associations were used in this study: Houghton-Carlisle—Adrian (HCA), Marlette- Capac-Parkhill (MCP), Marlette-Capac-Spinks (MCS), Miami-Hillsdale-Edward (MHE), and Spinks-Houghton-Boyer (SHB) (Table 3.1). Vegetation Types Site locations were selected fiom map data using ArcGIS 9.1 (Environmental Systems Research Institute 2004). I selected sites using the Integrated Forest Monitoring, Assessment, and Prescription (1F MAP) system developed by the MDNR (Michigan Department of Natural Resources 2001). The map was fiom derived fi'om Landsat TM 5 and 7 imagery from 1999 — 2001, had a 30 pixel size, and was ground verified for accuracy. The IFMAP system contained 7 major classes (level one) of land use (Table 3.2). Sites were selected in four level 3 classes of the main forested landscape class: lowland hardwoods, northern hardwoods, pine, and upland hardwoods (Table 3.2). Accuracy assessments varied considerably for the subclasses that I studied ranging from 25% to 87% (Table 3.2). Herpetofauna Drift Fence Arrays Drift fence arrays made from 60 cm high aluminum flashing with pitfall and funnel traps were used to capture herpetofauna (Corn 1994, Enge 1997). Drift fences intercept herpetofauna moving on the ground and re-direct them into a pitfall or funnel trap. Drift fences with pitfall and funnel traps were installed in April and early May prior to opening the traps in mid-May. They were opened for 5 consecutive nights each month in 2005 and 4 consecutive nights each month in 2006 from May through August (Table 132 02.22823 .0w080220 20082 22.2028 $2202 80> 022282822 2022 8022022220 2022082 2280222022282 022202222 2022 22202220820 2203 .2808 288002 2222082 2.2322 .2008 0080222 2203 .2808 288002 9.5 20.208280288002802825 022222222 .w2202 22.2028 80220820 022222882 2082 2222082 220220208 02.28208 6080.220 :03 .8002 22222208 002220222 2203 228002 E222 0030m-0202082222.2-2802§ o220822 2022 .2808 02222 2.88002 022222222 2022 $8002 022222222 2022 228002 m02>2 8820m00820002202202 0.828.822 2w2202 222022022228 28022 22202220222 28220022 2.28002 02.220822 2082 $8002 02.202222 2022 $8002 2202 22222022002200-02202202 022222222 09820222 02.220222 .0w0222022o 022222222 008222020 20082 80> .w2202 80> 20022 80> .w2202 80> 20082 80> .w2202 80> 80220820 28082 280222022282 222022028222 2222022 200222022822 8022022222 28082 2200222022082 82022 22w282 2020228 28082 2.2822 .2008 82022 22822 20228 <02 220222220702822200220222msoz 02000 m 222082082800 N 222022082800 2 222022082800 220m 2202202008820. 220m 133 2202822 0.20 8222022082800 00mH.20m 22022032088200 8002220832 20.280 2 E06 808m 220m2 02022 2203220232 20.2 503.09% 8202 220m 20202200 .m.D 02 w2222o20000 2802000 2802 8220220200880 220m .2.m 02820.2. Table 3.2. Landscape categories (and codes) according to the Integrated Forest Monitoring, Assessment, and Prescription (IFMAP) system (Michigan Department of Natural Resources 2001). Landscape Categories and Associated Class Descriptions Classification IFMAP Class Names and Grid Values Rate Urban Low Intensity Urban Land area >10% and <25% manmade 84 (Residential) (1) structures, including paved and gravel roads and parking lots. High Intensity Urban (2) Land area >2 5% solid impervious cover made 83 from manmade materials, other than airports, roads, or parking lots. Airports (3) lmpervious land within airport grounds, 99 including runways. Roads / Pavement (4) Roads or parking lots 96 Agricultural Non-vegetated agriculture (5) Land area tilled for crop production with <25% 55 currently vegetated. Row Crops (6) Vegetation is annual crops planted in rows 95 (e.g. corn, soybeans). Forage Crops (7) Vegetation used for fodder production (e.g. 100 alfalfa, hay). Also includes land used for pasture, or non-tilled herbaceous agriculture. Orchards/Vineyard/Nurseries(9) Woody trees not grown for Christmas trees. 95 Openland Upland Herbaceous Openland (IO) <25% of land area is covered by woody cover. 73 Low Density Trees (12) The combination of woody shrubs and trees is 88 >25% of the land area and >25% of the woody cover is trees. None mapped in SLP. Parks, Golf Courses (13) Upland open land maintained for recreational 96 purposes. Forested Deciduous Forest Northern Hardwoods (14)* Combination of maples, beech, basswood, 87 white ash, cherry, and yellow birch >60% of the canopy. Oak Type (15) Proportion of oaks >60% of the canOpy. 36 Aspen Type (16) Proportion of aspen >40% of the canopy. 45 Other Upland Deciduous (l7) Proportion of any other single species >60% of the canopy. Mixed Upland Deciduous (1 3)* Proportion of deciduous trees >60% of the 25 canopy. Lowland Deciduous Forest Proportion of deciduous trees >60% of the 56 (24)* canopy. Coniferous Forest (CF) Pines (19)* Proportion of pines >60% of the canopy. 71 Other Conifers (20) Proportion of non-pine upland conifers >60% 36 of the canopy. Mixed Upland Conifers (21) Proportion of coniferous trees >60% of the 0 canopy. None mapped in SLP. Lowland Coniferous Forest (25) Proportion of coniferous trees >60% of the 80 canopy. l34 Table 3.2. Con’t Upland Mixed Forest (22) Mixed forest not falling into any other 9 category. Proportion of conifers: deciduous ranges between 40%:60% to 60%:40%. Lowland Mixed Forest (26) Mixed forest not falling into any other 0 category. Pr0portion of conifers: deciduous ranges between 40%:60% to ' 60%:40%. Nonforested Wetland Floating Aquatic (27) Proportion of floating aquatic vegetation 76 >60%of non-water cover. Lowland Shrub (28) Proportion of lowland shrub >60% of 96 non-water cover. Emergent Wetland (29) Proportion of emergent wetland >60% of 81 non water cover. Mixed Non-forest Non-forested wetlands not falling into 85 Wetland (30) any other category. Water Water (23) Proportion of open water >75% of the 75 land area. Bare/Sparsely Vegetated Sand, Soil (31) Land cover is formed primarily of sand or 80 bare soil. Exposed rock (32) Land cover is formed of solid rock. None 100 mapped in SLP. Other Bare\Sparsely None. 92 Vegetated (35) *Categories were used in study site selection in Michigan during the 2005 and 2006 field seasons. 135 3.3) and were checked once daily. Three 5 m long sections of aluminum flashing were installed in a Y arrangement and 4 pitfall traps and 6 funnel traps were placed within the array (see Fig.1 Enge 1997). Arrays were oriented to the north. Pitfall traps were made from 18.9 L buckets. Holes were drilled approximately 2 cm fi'om the bottom of the trap to allow for drainage of rainwater (Enge 1997). The pitfall traps were buried slightly below ground level, allowing animals to drop into the bucket. Moistened sponges were placed in all pitfall traps to prevent desiccation of captured animals (Greenberg et al. 1994). The sponges were remoistened as needed (Enge 1997, Richter and Seigel 2002). Traps were closed by placing lids over the buckets. Funnel traps were placed at the midpoint of each wing of the aluminum flashing in the array (Greenberg and Tanner 2005). Funnel traps were double entry with the main body comprised of aluminum window screening and the funnels of flexible fiberglass screening. Traps had 20 cm openings at both ends with funnel openings of 5 cm in diameter (Corn 1994). When not in use, funnels traps were closed by inverting the funnels and clipping them shut. Coverboards Coverboards (Fellers and Drost 1994, Davis 1997) were placed within Im from the drift fence array in the four cardinal directions at least one week prior to drift-fence array installation. Coverboards were made of untreated birch plywood and cut into 1 m x l m sections and were placed on bare ground. Coverboards are designed to provide moist, cool refiige for herpetofauna (Houze and Chandler 2002) and create a microhabitat similar to a downed log. Coverboards were checked every day that the drifi fence arrays were open. 136 Table 3.3. Dates drift fence arrays, pitfall traps, funnel traps and coverboards were opened in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006. Date Opened Date Closed Number of Sites 05/17/2005 05/22/2005 20 05/24/2005 05/29/2005 22 06/06/2005 06/1 1/2005 20 06/14/2005 06/19/2005 22 07/1 1/2005 07/16/2005 20 07/19/2005 07/24/2005 2] 08/05/2005 08/09/2005 20 08/10/2005 08/14/2005 21 05/08/2006 05/12/2006 1 7 05/15/2006 05/19/2006 14 05/22/2006 05/26/2006 9 06/06/2006 06/1 6/2006 1 7 06/ 12/2006 06/ 16/2006 20 06/19/2006 06/23/2006 3 07/05/2006 07/09/2006 1 7 070/9/2006 07/13/2006 3 07/12/2006 07/16/2006 20 07/31/2006 08/04/2006 20 08/07/2006 08/1 1/2006 20 137 Area T ime-Constrained Surveys Area time-constrained surveys (ATC surveys) (Campbell and Christrnan 1982, Crump and Scott 1994) were conducted on each site once a month from May to August in 2006: 23 May — 31 May, 1 June- 2 June, 19 June —- 27 June, 19 July — 26 July, 1 August — 12 August; and in June and July in 2005: 22 June — 30 June, 22 July — 31 July. A 2 m x 37 in area (the same total area as the drift fence array) was delineated to conduct the area time—constrained surveys, and this same area was used for surveys throughout the season. ATC survey areas were selected near the drift fence array in one of the four cardinal directions, starting east of the array. When a 2 m x 37 m area fit in the designated soil and vegetation type, it was georeferenced with a GPS unit and flagged. This designated area was hand-searched for a period of 20 minutes by overturning downed logs and rocks and searching through leaf litter. Decay classes of the logs were recorded according to the US. Forest Service’s F IA Field Methods for Phase 3 Measurements, five decay classifications (USDA Forest Service 2004) (Table 3.4). Mark-Recapture Techniques All animals captured by pitfall traps, funnel traps, cover boards, and area time- constrained searches were processed before being released. Herpetofauna were identified to species, sexed (when possible), and marked. A11 amphibians were measured (snout to vent length, mm); and northern leopard frog (Rana pipiens), American toad (Bufo americanus), and green frog (Rana clamitans) with a snout to vent length measurement > 50 mm were PIT tagged (passive integrated transponders; AVID®). Salamanders and all other Anurans were marked by toe-clipping except treefro gs and relatives, but not for individual recognition. Snakes and turtles were measured and marked for individual 138 Table 3.4. Five decay classifications of downed logs (U .S. Forest Service 2004) used in area time-constrained surveys in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006. Class Description L1 Bark intact, twigs present. Texture is intact. Wood is original in color. Log is elevated on supported points above ground. L2 Bark intact, twigs absent. Texture is intact to partially soft. Wood is original in color. Log elevated on support points but sagging slightly. L3 Trace of bark. Twigs are absent and texture is hard large pieces. Color of wood is original to faded. Log is sagging near ground. L4 Bark and twigs are absent. Texture of wood is small, soft, blocky pieces. Wood is light brown to faded brown or yellowish. All of the log is on the ground. L5 Bark and twigs are absent. Texture of wood is soft and powdery. Color of wood is faded to light yellow or gray. The diameter of the log is attainable wood and log debris is not spread out in a flat manner. If a diameter is not attainable, then it is not considered a log, but a pile of debris. 139 recognition. A11 snakes were marked by clipping half of one ventral scale (Brown and Parker 1976) and turtles were marked by notching marginal scutes (Cagle 1939). Individuals were released at least 5 m from the point of capture on the opposite side of drift fence to minimize the probability of immediate recapture. Vegetation Variables Ground Vegetation Percent Cover Vegetation cover was collected at each drift fence array and corresponding ATC area using a Daubenmire frame (Daubenmire 1959) modified in size from 1,000 cm2 to 2,500 cmz. Measurements were taken within the drift fence arrays (5 fi'ames: 2 on either side of the north-south arm of flashing; one on east side of southeast arm of flashing; one on west side of southwest arm of flashing; and one south of center bucket) and ATC search areas (5 frames at 7 m, 14 m, 21 m, 28 m, and 35 m along the transect) once in July. Vegetation variables included percent live cover (fern, forb, grass, moss, and woody), standing dead cover, as well as estimates of bare ground, litter cover, and average litter depth. In 2005, vegetation variables were measured at 42 different sites, and in 2006, they were measured at 40 different sites. Vegetation measurements fiom the drift fence arrays and ATC survey locations were examined for correlations using Spearrnan Rank R statistics to determine if like measurements from individual study sites could be pooled resulting in one measurement per variable for the sampled patch. Each variable was correlated (P < 0.05) between the drift fence and ATC locations, thus they were averaged together to obtain a single measurement per variable. 140 Canopy Percent Cover and Composition Overstory vegetation was identified to species for all tree species that overlapped the drift-fence arrays and area time-constrained survey sites. At each site, canopy cover estimates were obtained with a spherical densiometer. At each drift fence array, canopy cover was estimated at the pitfall traps and cover board locations and at each ATC site, canopy cover was estimated along a line transect at 0 m, 6 m, 12 m, 18 m, 24 m, 30 m, and 36 m. For each location, four readings were taken in the four cardinal directions, and averaged to obtain on estimate per location. Because the canopy cover estimates were not independent of each other, the median of all measurements from both drift fence arrays and ATC sites was taken and the canopy cover measurement closest to the median and therefore, most representative of the study site, was used during analyses. Coarse Woody Debris Coarse woody debris > 10 cm in diameter that either intersected or were contained within the drift fence array and ATC sites were recorded. If coarse woody debris intersected both the drift fence array and ATC site, it was only recorded once. Length, width, and number of pieces were recorded for downed wood at each sample patch. A count of the number of coarse woody debris pieces, average width, and average length were used in the analysis. Weather Variables Precipitation A rain gauge was installed at each sampling site. Gauges were checked and emptied every day that the drift fence arrays were surveyed, as well as the day of the ATC survey. The average precipitation for the sampling period was used in the analysis. 141 The first day of the sampling period, corresponding to opening the traps, was not included in the average, as the gauge was not emptied from previous days. Some days also were censored fiom the average precipitation calculation because the rain gauge had been knocked over. Temperature Temperature was obtained from the state Climatologist in the Geography Department at Michigan State University as well as through National Climatic Data Center (National Ocean and Atmospheric Administration 2007) for weather stations distributed through the ecoregion. Sample site locations were matched to their nearest climate station using a GIS overlay of study site locations and climate station locations. Daily maximum and minimum temperatures were used to obtain an average daily maximum and minimum temperature for each site during the days that the drift fence arrays were surveyed, as well as the day the area time-constrained survey was conducted. Spatial Feature Proximity to Water Body Distance to the nearest water body (wetland, lake, stream, vernal pool, wet meadow) was measured from the center bucket of all pitfall traps at the drift fence array in May, June, and July. The type of water body, width and depth was recorded, and the location of the closest water body edge to the bucket of the drift fence array was georeferenced with a GPS unit. The mean distance, width, and depth of each recorded water body for the three sampling periods was used in the analyses. 142 Statistical Analyses Mixed Model with Repeated Measures — Considering Weather Eflects After examination of descriptive statistics and normal probability plots for original variables and potential data transformations, all climatology variables were log transformed and column standardized prior to analysis. Certain criteria were used to select variables for inclusion in potential models including R squared, Adjusted R squared, Cp (Mallow) statistics (Mallows 1973), forward selection, and backward selection. Outliers, collinearity, residual plots, meaningfulness and interpretation were examined for candidate models. To address differences between years (a < 0.05), a mixed model with repeated measures was used to determine which climatological variables were most influential in determining amphibian richness and herpetofaunal species richness and diversity. The treatment design consisted of three fixed factors including land ownership with two levels, vegetation type with four levels, and soil association with five levels and one to three potential random factors including minimum temperature (with 4 repeated measures), precipitation (with 4 repeated measures), and survey time (with 4 repeated measures). Models were ranked by how well they explained amphibian richness and herpetofaunal species richness and diversity data using Akaike’s information criterion corrected for small sample sizes (AICC) (Bumham and Anderson 2002).AICc was calculated as follows: AICC = -2*ln(likelihood) +2*K + (2*K*(K+1))/(n-K-l ), where In is the natural logarithm, (likelihood) is the value of the likelihood, and K is the number of parameters in the model, and n is the sample size (Burrrharn and Anderson 2002). Models were also evaluated using AIC weights (wi), which can be treated as the 143 weight of evidence in favor of a particular model, given the data set and the set of candidate models (Bumham and Anderson 2002). The factor main effects and the interaction effects were analyzed using ANOVA. When main effects were significant (a < 0.05), the treatment comparison among the marginal means was conducted. The data analysis was conducted using PROC MIXED (SAS Institute 2002). Mixed model — Focus on All Variables (Across Sample Periods) After examination of descriptive statistics and normal probability plots for original variables and potential data transformations, all habitat variables and climate variables (using the average of the 4 sampling periods for all climate variables, instead of repeated measures, as in the prior analyses) were log transformed and column standardized prior to analysis. Certain criteria were used to select candidate variables for inclusion in the models including R2, Adjusted R2, Cp (Mallow) statistics (Mallows 1973), forward selection, and backward selection. Outliers, collinearity, residual plots, meaningfulness and interpretation were examined for candidate models. A mixed model was used to determine which variables (climatological, habitat, and one spatial) were most influential in determining amphibian richness and herpetofaunal species richness and diversity. The treatment design consisted of three fixed factors including land ownership with two levels, vegetation type with four levels, and soil association with five levels, and 21 potential random factors. Models were ranked by how well they explained amphibian richness and herpetofaunal species richness and diversity data using Akaike’s information criterion corrected for small sample sizes (AICC) (Bumham and Anderson 2002). AlCc was calculated as follows: AICC = -2*1n(1ikelihood) +2*K + (2*K*(K+1))/(n-K-l), 144 where In is the natural logarithm, (likelihood) is the value of the likelihood, and K is the number of parameters in the model, and n is the sample size (Bumham and Anderson 2002). Models were also evaluated using AIC weights (wi), which can be treated as the weight of evidence in favor of a particular model, given the data set and the set of candidate models (Bumham and Anderson 2002). The factor main effects and the interaction effects were analyzed using ANOVA. When main effects significant ((1 < 0.05), the treatment comparison among the marginal means was conducted. The data analysis was conducted using PROC MIXED (SAS Institute 2002). Constrained Ordination A constrained ordination was used to examine the relationship between herpetofaunal species and habitat and weather variables (collectively called environmental data). Herpetofaunal species abundance data were the response variables and the environmental data were the explanatory variables. The goal of the constrained ordination was to infer patterns in herpetofaunal species composition from patterns in the environmental variables. I removed species from my herpetofaunal community data set with less than 3 occurrences because they were most likely not sufficiently sampled and would not be accurately placed in ecological space. Of 18 species sampled, 12 were retained (Table 3.5). The species abundance data was highly skewed and heteroskedastic, so the data was log transformed as well as a column normalized using R 2.4.0 (R Development Core Team 2006). Twenty-one explanatory variables were included in the environmental data set 145 tot0 wfififig 8o 03682.80. 3 02:00:23.W mood wood 0. «ammo. 0038 sonar 505.8: amueomhemummw 06.23% 030402305 mood oood 3 Hmmh 003mm 009% E0600 £030 £030 wEmozsefi :00 :50 mm :20 080 0382 52:8 3&3 230 35.0 $3 % >m§ 080 803 8:35. sex Sod 3.3 mm .658 020 :80 E30550 930 omod on o .o mv MUmm 803a wctom $5050 wtoehzmwm Sod mood w Mkmm woo 080:0 50603 30.20%: wi0§30£ mood mood om mi: 8500.: ham 50500 333.20; Sat ovod mmmd K 2>Om :0 380:8 800 208050 E03368 3:85:00 05 E Boa—0E 0200mm 35030080: m~ 05 mo Ammo 00:09:50 85309800 2008 one 00:82 .m.m 030... 146 that included all of the habitat variables, weather variables, and proximity of the sampling site to water, as well as water depth and width (Table 3.6). The data set was assessed for multicollinearity issues by computing Pearson product-moment bivariate correlations between pairwise combinations of variables (Ott and Longnecker 2001). Variables with high correlations > :1: 0.7 indicated potential multicollinearity problems. Variance inflation factors (VIF) were also assessed for each variable. A deviation of VIF from 1 indicates a tendency toward collinearity and VIF can be used to measure multiple correlations between an individual variable and the other variables in the data set (Chatterjee et a1. 2000, Ott and Longnecker 2001). A high VIF (> 10) indicates that the variable is highly correlated with other variables (Chatterjee et a1. 2000). Two variables showed problems with multicollinearity and were removed: percent total cover and percent live cover. It was expected that these two variables would be highly correlated with each other and with other habitat variables because they nested (Table 3.6). To achieve a parsimonious suite of explanatory variables to include in the constrained ordination, I subjected the environmental variables to forward stepwise variable selection and backward elimination using Akaike’s information criterion (AIC) (Akaike 1987). The variables chosen for inclusion in the model were from the three sets of data: habitat variables (percent canopy cover, distance to water, and litter depth), climate variables (average maximum daily temperature, average daily precipitation), and categorical variables (soil association, and ownership type). To determine whether a linear response model (Redundancy Analysis (RDA), Constrained Analysis of Principle Coordinates (CAPSCALE)) or unimodal response model (Canonical Correspondence Analysis (CCA)) was the most appropriate for the 147 Table 3.6. Mean, standard error (SE), and range of habitat and weather variables recorded in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006 and used in model selection for repeated measures, mixed models, and constrained ordination. Variable Model Code Mean (SE) Range Habitat Variables Total Cover (%) totalcover 95.0 (0.84) 57.5-100.0 Live Cover (%) totallive 36.0 (2.09) 2.5—78.5 Grass Cover (%) grass 0.9 (0.3 5) 0—21.0 Fern Cover (%) fern 3.3 (0.62) 0—21.5 Forb Cover (%) forb 10.9 (1.30) 0—66.5 Moss Cover (%) moss 1.6 (0.34) 0—18.5 Woody Cover (%) woody 19.3 (1.50) 0—56.5 Standing Dead (%) dead 0.] (0.07) 0—5.0 Litter Cover (%) litter 58.8 (2.47) 5.5—97.5 Bare Ground (%) bare 5.0 (0.84) 0—42.5 Litter Depth (cm) litterdepth 2.6 (0.15) 0.6—5.4 Canopy Cover (%) canopy 94.9 (0.48) 0—99.2 Coarse Woody Debris (# counted) cwd 4.0 (0.37) 0—15.0 Width (cm) width 18.3 (0.83) 10.75—58.0 Length (m) length 8.5 (0.46) 0.5—22.9 Distance to water (m) waterdist 95.7 (1 1.04 0—407.2 Water depth (cm) waterdepth 21.8 (1.89; 2.5—89.0 Water width (m) waterwidth 37.9 (6.16) O.8—340.0 148 Table 3.6. Con’t. Variable Model Code Mean (SE) Range Weather Variables Minimum Daily Temperature (°C) mintemp 14.3 (0.26) 12.5—16.7 Maximum Daily Temperature (°C) maxtemp 25.9 (0.27) 24.1-28.5 Precipitation (mm) rain 4.73 (0.28) 1.5—1 1.1 1. 49 C0115 a ri The lin< joir We. loc be I fall the: 1 lo and constrained ordination, I conducted a Detrended Correspondence Analysis (DCA) (Hill and Gauch 1980). First, I calculated the gradient lengths of the DCA axes, which are the lengths of the ordination axes in terms of standard deviations in the rate of change in species composition (Knut et a1. 2003). A length greater than four is indicative of a unimodal response (bell-shaped response curve) because it allows species to demonstrate a rise and decline in abundance. Shorter DCA lengths (< 2) indicate a linear response. The gradient lengths for my community data set were between 1 and 3, indicating that a linear response model was most likely appropriate (Table 3.7). Second, I produced a joint plot of sites and species (Figure 3.1). In my joint plot, I found that most species were located outside of the distribution of my sites, indicating that the species optima was located outside the range of my sites and that the maximum abundance was predicted to be outside of the range of my sampled sites. Because the species optima did not rise and fall within the range of my sites, a unimodal response model was not appropriate, and therefore a linear response model best described the response model (Figure 3.1). Third, I looked at the species’ fitted curve on each axis. These showed a mixture of unimodal and monotonic responses indicating that linear or unimodal responses were appropriate depending on individual species response. Based on the above criteria, 1 used a Redundancy Analysis (Rao 1964), which is a linear response model, in combination with chord distance (row normalization). Standardizations such as chord distance are recommended for use with RDA to circumvent problems associated with using Euclidean distance for the analysis of community data sets (Legendre and Gallagher 2001). To interpret species’ responses to major environmental gradients, 1 produced a 150 Table 3.7. Gradient lengths of the ordination axes from the Detrended Correspondence Analysis (DCA). Herpetofaunal community data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. DCAl DCA2 DCA3 DCA4 Eigenvalues 0.358 0.234 0.190 0.144 Decorana Values 0.461 0.222 0.135 0.1 10 Axes lengths 2.276 2.438 1.654 2.050 151 THSA DCA2 HI)! -1 1 DCA1 Fig. 3.1. Joint plot of species and sample sites. Species shown in red letters and represented by codes (see Table 3.5) and sites shown in black numbers. Species fall outside of sites indicating that a linear response model is appropriate. Herpetofaunal community data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. 152 biplot of the significant model. The biplot demonstrated the relationship between species, the environmental variables, as well as the ordination axes derived from the species data (ter Braak and Smilauer 1998). Species are represented by points and environmental variables by vectors, which point toward rate of maximum change and extend in both directions (ter Braak 1986). The length of the vector indicates its importance to the constrained ordination (ter Braak 1986). Perpendiculars drawn from species to vectors give the approximate ranking of that species’ response to the environmental variable and indicate the species’ optimum on that variable (ter Braak 1986). A smaller angle between the vector and the ordination axis indicates a greater relationship of the variable to the derived constrained ordination gradient (Grand and Mello 2004). To aid in interpretation, generalized additive models (GAMs) were used to fit surfaces of explanatory variables to the ordination scores. A surface of parallel, straight contours is indicative of a variable that lies linearly across the ordination space and also indicates that the relationship between the variable and ordination space is effectively represented by the linear biplot vector (Oksanen 2007). All data analysis was conducted with R 2.4.0 (R Development Core Team 2006). RESULTS Eighteen species were observed during the study with average species richness of sites ranging from 0 to 4. Sixteen species were observed on SGWA and 14 on private lands (Table 3.8). None of the five soil types had all 18 species present (Table 3.9) and none of the four vegetation types had all 18 species present (Table 3.10). 153 Table 3.8. Species observed by land ownership on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained survey including incidental observations. Scientific Name Species SGWA Private Ambystoma laterale blue-spotted salamander X X Ambystoma tigrinum eastern tiger salamander X X Plethodon cinereus red-backed salamander X X Bufo americanus americanus eastern American toad X X Hyla versicolor eastern gray treefrog X X Pseudacris triseriata triseriata western chorus frog X X Pseudacris crucifier spring peeper X X Rana clamitans green frog X X Rana sylvatica wood frog X X Rana pipens northern leopard frog X X Chelydra serpentina common snapping turtle X T errapene carolina carolina eastern box turtle X Chrysemys picta painted turtle X Thamnophis sirtalis sirtalis eastern garter snake X X Thamnophis butleri Butler’s garter snake X Thamnophis sauritus septentrionalis northern ribbon snake X X Storeria occiptomaculata northern red-bellied snake X Lampropeltis triangulum triangulum eastern milk snake X 154 X 0x000 0:00 E00000 X 00000 002—00-000 E05000 X 00000 0000: E05000 0x000 00t0w 0.00—00m XXXX X X X X 00000 00000 E00000 0:02 00000 X X 0:000 00 E00000 0E0. $000000. 0000000 moo E00000 E05000 woo 0003 web 00000 XXXXX 000000 @0000. woo 00.0000 E00003 w00o000 0% 0007.00 XXXXXXX n50“ CMUCDE< Evade XXXXXXXXX 0000000200. 000—00060. 0000000200. 00w: 0000000 XXXXXXXXXX XXXXXXXXXXX XXXXX 000008200 000000-003 155 mam 5.32 x52 mUE 00603 < L) :13 000008030 00000205 w0_00_00_ 00800 0050508 0000.000 000 0000000000 000 .0000 0000.0 .0000 =0.t_0 003 020000 080.00 00000 $00 >0 0000000 00 0000p doom 000 moom 0000000 5 0080002 .00 20000000 0300 0.0000000 05 E 0000— 000300 000 <>>Om 00 008 :00 .3 0080000 00603 dd 030% XX XXXXXXXXXX x 000300000 05000 XXXXXXXX X 080 X XXXXXXXXX X 00030003 00000002 XXXXXXXXXX X 00030002 000.300 00.000. 0:00 0000100 000000 00500-000 0000000 00.007. 000000 00000000 000000. 000000 0.00005 0x000. 00000w 00000.00 00000 0000000 0003 x00 0000000 0:08 w0000000 00000000 0000 000002 00000000 wow 0003 M000 0000w 000000 900000 w000 000000 0000003 w0000000 >00w 0000000 0000 00000080. 0000000 000008300 000—000-000 0000000200 00w: 0000000 0000080000 000000-020 000000m 00000300000 00000000000 w0002000 >0>0=m 00000000000 0000-0000 000 0000000030 000 .0000 000000 .0000 00.000 003 0000000 m>0000 0000.0 «00 >0 0008000 00 00000 000m 000 moom 00000000 00 00w00002 .00 03000000 00301— 00000000 000 00 0003 000300 000 <>>Om 00 00>0 000000w0> >0 0030000 m00000m 60m 0300. 156 Mixed Model with Repeated Measures — Considering Weather Effects Amphibian Species Richness The mixed model with repeated measures for amphibian richness with the best fit (lowest AICc value) included the three fixed effects (owner, soil, and vegetation, as well as all interactions between these terms), and three random effects (minimum temperature, precipitation, and time period) (Table 3.11). The effect of ownership and vegetation type was not significant (P = 0.60), however the main effect of soil was significant (P < 0.01) (Table 3.12). The random effects of minimum temperature (P < 0.01) and precipitation (P < 0.01) were significant as well (Table 3.13). Comparisons were performed among the marginal means of the soil associations and among the soil associations, MCP was found to have a lower mean response than the other 4 soil associations (P < 0.01) (Table 3.14). Herpetofaunal Species Richness The mixed model with repeated measures for herpetofaunal species richness with the best fit (lowest AICc value) included the same variables as the model for amphibian species richness (Table 3.15). The effect of ownership and vegetation type was not significant (P = 0.65), however the main effect of soil were significant (P < 0.01) (Table 3.16). The random effects of minimum temperature and precipitation were also significant (P < 0.01 for both) (Table 3.17). Comparisons were performed among the marginal means of soil associations and among the soil associations, MCP was found to have a lower mean response than the other 4 soil associations (P < 0.01) (Table 3.18). 157 20000.0 000 00.0 06 0000080000 .00 0000000 000 .030 00303 0000000. A023 02 0300000 A0020 00000000 :00; 00.0 00000000 00000000 0000800000 0.0000004. 0000000 00000.0 0 000.0 N0 mood 0. mm 0.003 +0000+0§00EE+M003 0.000.... 00:30+M0>* 0.003%?! 00030+>000r 00=3Q+M00+200+00§x0 000.: +000: 2 m2 .o 0.2 0&2: S00+0§00§E+M03 :00... 00:30+M0>* 0.0030000... 00:30i0000. 00:30+M00+000+00030 000.00 + N0 mm 0 .o m0 meme SE+0§00§E+M03 >000... 00:30+M0>* 000+??? 00:30i000... 00=E0+M00+m00+00030 0000:0000. m0 0mmd Wm QMNOH + SE+QE$EE+M0$ 0.000.... 00:30+M0>* 0.003%?! 00:30i000... 000030+M0>+200+00=30 000.0 2 03.0 0.0 wde +0000+0§00EE+M03 20010030+M0f 000+M0>f00=30+00$ 00:30+w00+000+00=30 00 _3 0:2. .0? 00oz .m>0>00m 00000000000 0000-0000 000 0000000030 000 .0000 000000 .0000 00000 003 020000 m>0000 0000.0 500 >0 00000000 00 00000 000m 000 Sam 00000000 00 00w00002 00 000000000 00300 00000000 000 00 00000 000300 000 <30m 00 0000000000 00000000 003 0200000 000000 300000 000000. 0000000000 0.000 m 00.0 00000.0 02 .0 0m 200% 158 Table 3.12. Type 3 fixed effects for the amphibian species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation Numerator Denominator P Value Pr>F DF DF Owner 1 48.1 2.04 0.16 Soil 4 48.9 4.55 <0.01 Vegetation 3 48.1 1 .93 0.14 Owner*Soil 4 48.5 2.32 0.07 Owner*Vegetation 3 48.1 0.63 0.60 Soil*Vegetation 6 48.1 0.41 0.87 Owner*Soil* Vegetation 5 48.1 0.63 0.68 159 Table 3.13. Solution for random effects for the amphibian species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Effect Time DF t Value Pr>|t| mintemp 55.2 5.96 < 0.01 rain 234 5.74 < 0.01 Time May 4.52 1.92 0.12 Time June 2.77 -2.05 0.14 Time July 3.02 0.21 0.85 Time Agust 3.45 -0.44 0.69 160 Table 3.14. Mean comparisons by soil for the amphibian species richness mixed model with repeated measures. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Soil Type Mean Standard Error HCA -2395“ 4.14 MCP -25_o7b 4.14 MCS -24303 4.15 MHE .2356a 4.13 SHB -24, 1 9a 4.15 *means within a column with the same letter are not significantly different (a=0.05). 161 0.0008 000 000 0: 00000000000 .00 0000000 000 .030 00w003 0000000.. .6003 02 0300000 .CUEV 00000000 00000 00.0 00000000 00000000 000000000— 0.00=0x< 000.000 000000 0 0 0 306 ohm 0.02: 0500+RE00EE+M0320P 00:30+M0>* 00:00.03. 00:30i000... 00:30+M0>+~.000+00=30 000.00 +0000+ 2.8.0 2 00 0 .o 0.0 N680 +05008E+M0>0 >000... 00:30+m0>* hoe-+0000... 00030+N000r 000030+M0>+200+00=30 000.0 +500 N0 mmmd 0. m 0.080 +Q500§E+M0320§ 00:30+M0>* 0.00330... 00:30+~.000* 00:§0+M0>+>000+00030 0:00:00? m0 086 wd m. mmS EE+RESSE+M0>LBP 00:30+M0>* 0.0030000... 00030+000* 00:30+M0>+>000+00=30 0000+ .2 thd od mdmg 2000+S§0EE+M00100P 00:30+M0>* 0.00.330... 00030+2000 00:30+M0>+>80+00=30 00 _a 0000 000.. 0002 .0>0>000 00000000000 0000-0000 000 00000000060 000 .00000 00003 .0000 00000 003 0000000 0>0000 0000.0 0000 >0 00000000 00 00000 002.. 000 moom 0000000 00 0030002 00 000000000 0033 00000000 000 00 00000 000300 000 <>>Om 00 00000008 00000000 003 00000000 000000 0000000 0000000 0000000000000 0000 m 00.0 000000 0?. .m 0.0. 2000. 162 Table 3.16. Type 3 tests of fixed effects for herpetofaunal species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation Numerator Denominator F Value Pr>F DF DF Owner 1 49.4 1 .64 0.21 Soil 4 50.1 3.70 0.01 Vegetation 3 49.5 1 .72 0.1 8 Owner* Soil 4 49.8 1.64 0.18 Owner*Vegetation 3 49.5 0.55 0.65 Soil*Vegetation 6 49.4 0.37 0.89 Owner*Soil* Vegetation 5 49.5 0.55 0.74 163 Table 3.17. Solution for random effects for herpetofaunal species richness mixed model with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in smnmer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Time DF t Value Pr>|t| mintemp 45.5 5.50 < 0.01 rain 240.0 6.23 < 0.01 May 4.8 1.69 0.16 June 2.9 -2.25 0.11 July 3.2 0.42 0.70 August 3.7 -O.22 0.83 164 Table 3.18. Mean comparisons for soil types for herpetofaunal species richness mixed model with repeated measures. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Soil Type Mean Standard Error HCA -22,123* 4.12 MCP -2123" 4.12 MCS .2140a 4.13 MHE -21.78“' 4.11 SHB .223421 4.13 *means within a column with the same letter are not significantly different (0L=0.05). 165 Herpetofaunal Species Diversity The mixed mode] with repeated measures for herpetofaunal species diversity with the best fit (lowest AICc value) included the fixed effects of soil and vegetation, as well as the random effects of minimum temperature, precipitation, and time period (Table 3.19). The main effects of soil and vegetation type were not significant (P = 0.06 and P = 0.23, respectively) (Table 3.20). The random effects of minimum temperature and precipitation were significant (P < 0.01 for both) (Table 3.21). Mixed model — Focus on All Variables (Across Sample Periods) Amphibian Species Richness The mixed mode] for amphibian richness with the best fit (lowest AICC value) included the three fixed effects of owner, soil, and vegetation, as well as all interactions between these terms, and only the random effect of maximum temperature (Table 3.22). The effect of ownership was not significant (P = 0.08), however the main effects of soil and vegetation were significant (P < 0.01 and P = 0.02, respectively), as well as the interaction between soil and ownership (P < 0.01) (Table 3.23). The random effect of maximum temperature was significant as well (P < 0.01)) (Table 3.24). Comparisons were performed among the marginal means of the soil and vegetation types. Among the soil associations, MCP had a lower mean response than the other 4 soil associations (P < 0.01) (Table 3.25). Among vegetation types, upland hardwood had the greatest mean response, but none of the 4 vegetation types differed from each other (P > 0.05) (Table 3.26). 166 00008 05 8.0 0: 0000080000 .00 000800 000 6.5 3203 0008? .623 0?. 0350.. A0003 003800 2080 .80 000000.80 00000.5 00008085 0.000000. 00205 0:000m 0 2 w~ mo 93 Wmmm +E§+QSO0SE+M03 200* 00=§Q+M0f norm?! 002300.580... x0=§o+M0>+2000~M~MMMHW 05.: N" on fl .o 0.3 0.0 M m +53+Q80NEE+M03200100030+M0358.3%?»x0~§0+>80§00=§Q+M0>+>80+00S$c a 0m H .o 0.2 m. m H m 0E§+0n0+ SE+R§0§85+ M0>+>80+x0=§o 0 000.0 0.0 0.80 050203300035 +00>+200+0§0 n 2 md 06 Name». 050+SE+QE£SE+M0>+NS0 0 E 020 002 0.002 000200 00500008 080-080 0:0 00.00.0050 000 .0000 _0003 .0000 €03 .005 003000 000.30 0000» £00 03 0003000 00 00000 coca 0:0 moom 08800 E 003022 mo 0305:0m 0033 E00000 05 5 00:0— 000309 000 <>>Om co 00.30008 00000900 505 000008 00me 5000030 006000 0000090900 0000 m 08 000000 02 .0 fl .m 030... 167 Table 3.20. Type 3 tests of fixed effects for herpetofaunal species diversity mixed mode] with repeated measures (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation Numerator DF Denominator F Value Pr>F DF Soil 4 69.1 2.36 0.06 Vegetation 3 68.1 1 .44 0.24 168 Table 3.2]. Solution for random effects for herpetofaunal species diversity mixed model with repeated measures (a. = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Effect Time DF t Value Pr>|t| mintemp 44.2 4.66 < 0.01 rain 147.0 3.99 < 0.01 Time May 4.5 1.91 0.12 Time June 2.8 -1.91 0.16 Time July 3.0 -O.67 0.55 Time August 3.5 0.27 0.81 169 0000000 05 .80 Cc 0000080000 .00 000800 000 A05 Ems? 0008?. .623 02 0300—00 .Aoogv 003800 :00; 08 000000.80 0200000 000000£E 0.000002 002000 0:000M 0 0 0 m0 _ .o 00 0&2 000\+0.E00=.§+M0>* >80... 00=§0+w0>s 0030003. 00=§0+mo0r L0=§0+M0>+000+00=§0 £3 + Na mm _ .0 Wm 0. fl 2 RESRQE+£Q+M0>£NQ00 00=§0+M0>1000+M03 meioimcr. x0=§0+m§+200+00§8 2 00 _ .0 Wm ~62 QE0NEE+M0>020P 00=§0+M0$200+M03 x0=§0+200* x0030+m§+200+00=§0 $00085 _ ~ womd 0.N N62 +0.5? +M0fmofl. 00=§0+M0>LB0+M03 xmnicimcur x0=§0+M0>+200+00=§0 3 nmmd 0.0 0.03 Q500§S+M032000 00:§0+M0>L.80+M0>* gmnioimof 00=§c+m§+000+00=§0 0 _3 020 002 0002 000200 0000000000 080-0000 000 00000030 000 .0000 _0003 .0000 =0.t_0 0005 003000 00000 00000 E00 3 00.00000 00 0000p coom 000 moon. 0050.50 0_ 00w332 00 0305000 00.504 0.005000 20 E 0000— 000300 000 <30m 00 0200000 00028 0000000 020000 0053900 0000 m 00.0 000000 02 .mm.m 030... 170 Table 3.23. Type 3 fixed effects for amphibian species richness mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation Numerator Denominator F Value Pr>F DF DF Owner 1 51.1 3.12 0.08 Soil 4 51.1 9.96 < 0.01 Vegetation 3 5 l 3.74 0.02 Owner*Soil 4 51 3.92 <0.01 Owner*Vegetation 3 51 1 .54 0.21 Soil*Vegetation 6 51 0.61 0.72 Owner*Soil* Vegetation 5 51 1.83 0.12 171 Table 3.24. Solution for random effects for amphibian species richness mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Effect DF t Value Pr > M maxtemp 51.7 5.78 < 0.01 172 Table 3.25. Mean comparisons by soil for amphibian species richness mixed model. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Soil Type Mean Standard Error HCA 2323* 0.27 MCP 123,1) 0. 16 MCS 207a 0.14 MHE 2,743 0.39 SHB 2213' 0.13 *means within a column with the same letter are not significantly different (0t=0.05). 173 Table 3.26. Mean comparisons by vegetation for amphibian species richness mixed model. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Soil Type Mean Standard Error Lowland Hardwood 1983* 0.15 Northern Hardwood 2.22a 0.18 Pine 1.91a 0.19 Upland Hardwood 2,358 0.17 *means within a column with the same letter are not significantly different (0t=0.05). 174 Herpetofaunal Species Richness The mixed model for herpetofaunal species richness with the best fit (lowest AICc value) included the three fixed effects of owner, soil, and vegetation, as well as all interactions between these terms, and only the random effect of maximum temperature (Table 3.27). The effect of ownership was not significant (P = 0.15), however the main effects of soil and vegetation were significant (P < 0.01 and P = 0.02, respectively) (Table 3.28). The random effect of maximum temperature was significant (P < 0.01) (Table 3.29). Comparisons were performed among the marginal means of the soil and vegetation types. Among the soil associations, MCP had a lower mean response than the other 4 soil associations (P < 0.01) (Table 3.30). Among vegetation types, upland hardwood had the greatest mean response and pine had the lowest mean response (Table 3.31). Upland hardwoods differed from lowland hardwoods and pine (P = 0.05 and P = 0.03, respectively) (Table 3.31 ). Herpetofaunal Species Diversity The mixed model for herpetofaunal species diversity with the best fit (lowest AICc value) included only soil and maximum temperature (Table 3.32). The effect of soil and maximum temperature were significant (P = 0.02 and P < 0.01, respectively) (Table 3.33 and 3.34). Comparisons were performed among the marginal means of the soil associations. Among the soil associations, MCP had a lower mean response than soil associations MCS and SHB (P < 0.01 for both) (Table 3.35). Constrained Ordination Seven environmental variables accounted for 28.2 % of the total variation in the herpetofaunal community data set (Table 3.36). The full model was significant 175 200000 000 00.0 C: 0000080000 .00 0000000 000 .033 ES?» 8092 .623 0?. 0300000 A023 0030000 :20 000 08000000 0000000000 00000000000 0.0000010. 002000 000000 0 0 0 mm 0 .0 N0 m6? EE+Q500EE+M03 0000000=§0+M03 ~000+M0300=§0+2000 00:30+M0>+200+00=§0 00 am 0 .o Wm w.wm_ QE00=NE+M0>0 0.000... 00=§0+M0>*200+M0>* 00=§0+~000* 00=§0+M0>+200+000§0 0800+ N0 mm 0 .0 Wm wme 500+0§00005+M0>0 200... 00=§0+M00f ~000+M0300=§0+~0000 00=§0+M0>+~000+00030 0 0 N. 0 Nd 0.0 o0»; SE+0§00§E+M0$~0000 00:§0+M0>*N.000+M0>* 00=§0+\.000* 00=§0+M0>+200+00=§0 c0 vmmd od mam— Q000008=0+M0>0 0000000=§0+M03 203mg... 00=§0+~000* 00=§0+M0>+200+00=§0 .0 E 0000 .000 0082 0.000000 0000000000 00000000 000 00000000>00 000 .0000 0000000 .0000 20,0000 0005 0000000 0.0000 0000.0 500 .00 0008000 00 00000 000m 000 38 00000000 00 0030002 .00 000000000 00.53 0.0000000 05 S 0000— 000300 000 <>>Om 00 00000000 000000 00000000 0000000 0000000000000 0000 m 00.0 000000 02 .nmxr. £000. 176 Table 3.28. Type 3 Analysis of Variance for herpetofaunal species richness mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation Numerator Denominator P Value Pr>F DF DF Owner 1 51.1 2.18 0.15 Soil 4 51.1 8.22 < 0.01 Vegetation 3 51.0 3.43 0.02 Owner* Soil 4 51.1 2.47 0.06 Owner*Vegetation 3 51 .0 1 .39 0.26 Soil*Vegetation 6 51.0 0.62 0.72 Owner*Soil* Vegetation 5 51.0 1.79 0.13 177 Table 3.29. Solution for random effects for herpetofaunal species richness mixed mode] (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Effect DF t Value Pr > |t| maxtemp 51.5 5.52 < 0.01 178 Table 3.30. Mean comparisons by soil for herpetofaunal species richness mixed model. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Soil Type Mean Standard Error HCA 143* 0.27 MCP 1,51) 0.16 MCS 2,2a 0.14 MHE 2_4a 0.40 SHB 2,3,a 0.13 *means within a column with the same letter are not significantly different (0t=0.05). 179 Table 3.31. Mean comparisons by vegetation for herpetofaunal species richness mixed mode]. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Vegetation Type Mean Standard Error Lowland Hardwood 203* 0.19 Northern Hardwood 2,3ab 0.18 Pine 1,88' 0.23 Upland Hardwood 2,5b 0.16 *means within a column with the same letter are not significantly different (a=0.05). 180 0000.0 000 00.0 03 0000080000 .00 000800 000 .033 00303 000002 .623 02 0300—00 $023 0009000 =080 000 08000000 000000000 0000000000000 0.000002 002000 000030 0 0. 0w 0.0 m.o_ 0. T SE+0§0008E+M0>+200+00=§0 0 am 0 .o 0.00 ON- Q500§E+M0>+mc0+00=§0 m mm 0 .0 5m v.0- 02500005+M0>+200 v 0NN.O Nam 0.x- Q500=05+200 0 mead od #5.. S§08E+200 0 .3 020 .000 0022 0.00000 00000000000 080-0000 000 00000000>00 000 .0000 00000.0 .0000 00.000 0005 0000000 0.000 00000 $00 .00 0003000 00 00000 000m 000 meow 008800 00 00300.02 00 03000000 00.500 00000000 000 00 0003 000.000 000 350.0. 00 0200000 0808 30000.00 0000000 0000000000000 0000 m 000 000000 02 .mm.m 030.0. 181 Table 3.33. Type 3 analysis of variance for herpetofaunal species diversity mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation Numerator Denominator F Value Pr>F DF DF Soil 4 73.3 3.18 0.02 182 Table 3.34. Solution for random effects for herpetofaunal species diversity mixed model (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Effect DF t Value Pr > |t| maxtemp 55.7 3.54 < 0.01 183 Table 3.35. Mean comparisons by soil for herpetofaunal species diversity mixed mode]. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Soil Type Mean Standard Error HCA 2.2231” 0.25 MCP 1.40b 0.16 MCS 2.19a 0.15 MHE 2.90ab 0.40 SHB 2.30a 0.14 *means within a column with the same letter are not significantly different (a=0.05). 184 Table 3.36. Summary of the results of the constrained ordination explained by the environmental variables. Herpetofaunal community data and environmental data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Inertia Proportion of Variance Total 0.397 1.000 Constrained 0.1 12 0232* Unconstrained 0.285 0.71 8 *Proportion of variance explained is calculated by dividing the sum of canonical eigenvalues by the total inertia (sum of unconstrained eigenvalues). 185 (P <0.005) according to the Monte Carlo permutation test, which indicates that the proportion of species variance explained by the environmental constraints was greater than expected by chance. Monte Carlo permutation tests also showed that the first 2 canonical axes (RDAl and RDA2) were significant (P < 0.005) (Table 3.37) and all of the variables except litter depth were significant (P 50 .05) (Table 3.38). The first axis explained 13% of total species variance (eigenvalue/total inertia*100). This axis was a gradient of patches with increasing canopy cover and increasing distance to the nearest water body. The second axis explained 7.5% of the total species variance. This axis was a gradient of patches with increasing temperature, overstory canopy cover, and increasing leaf litter depth. In the biplot, perpendicular projections of species points to the enviromnental gradients explain the associations of individual species. For example, eastern American toads were associated with patches that occurred at greater distance to the nearest water body and less overstory canopy cover (Figures 3.2, 3.3, 3.4); wood frogs were associated with patches that contained greater overstory canopy cover and leaf litter depth, and shorter distances to the nearest water body (Figures 3.2, 3.5, 3.6); spring peepers were associated with patches that contained increasing litter depth (Figures 3.2, 3.7); red- backed salamanders were associated with patches that contained denser canopy cover and higher maximum temperatures (Figures 3.2, 3.8); and green frogs were associated with patches that contained less canopy cover and higher maximum temperatures (Figures 3.2, 3.9). In the biplot, it is more appropriate to represent categorical variables such as land ownership type (SGWA and private) and soil association (HCA, MCP, MCS, MHE, 186 Table 3.37. Summary of Monte Carlo permutation tests showing significance of each axis in the constrained ordination (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Axes Df Variance F # Permutations Pr(>F) RDA] l 0.05 2.18 200 < 0.01 RDAZ l 0.03 1.23 700 0.03 RDA3 1 0.02 0.80 100 0.23 RDA4 1 0.01 0.32 100 0.96 RDAS 1 < 0.01 0.07 100 1.00 RDA6 1 < 0.01 0.06 100 1.00 RDA7 1 < 0.01 0.02 100 1.00 RDA8 1 < 0.01 0.01 100 1.00 RDA9 1 < 0.01 0.01 100 1.00 RDAlO 1 < 0.01 0.00 100 1.00 Residual 12 0.29 '187 Tabl variz in th 1336 wate rain littel mat own soil Resi Table 3.38. Summary of Monte Carlo permutation tests showing significance of variables in explanatory data set (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Variable Df Variance F # Permutations Pr(>F) canopy 1 0.023 0.98 100 < 0.01 waterdist 1 0.018 0.77 100 0.01 rain 1 0.012 0.49 100 0.01 litterdepth 1 0.008 0.34 100 0.12 maxtemp 1 0.009 0.3 8 100 0.05 owner 1 0.01 1 0.45 100 0.05 soil 4 0.032 0.33 100 < 0.01 Residual 1 2 0.285 188 0. _ ‘_ soilMCP PLCI ‘0. _ ' O D (I O. a O HYVE waterdist SGT/IMHEE BUAM litter epth SOIIMCS to. _, t ' max emp : C? soilSHBE g RACL PSCR ' l l i r l -1.0 -0.5 0.0 0.5 1.0 RDA1 Fig. 3.2. Constrained ordination diagram (biplot). Species are represented by codes (see Table 3.5), the proximity of species in ordination space indicates occurrence in similar environmental conditions. Environmental variables are represented by vectors, which point toward rate of maximum change and extend in both directions. The length of the vector indicates its importance to the constrained ordination (ter Braak 1986). Perpendiculars drawn from species to vectors give the approximate ranking of that species response to the environmental variable and indicate the species optimum on that variable (ter Braak 1986). A smaller angle between the vector and the ordination axis indicates a greater relationship of the variable to the derived constrained ordination gradient (Grand and Mello 2004). 189 R DA2 RDA2 -1.0 -0.5 0.0 0.5 1.0 RDA1 Fig. 3.3. Plot of eastern American toad abundance in a Generalized Additive Model (GAM) surface for distance to water (m) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates greater abundance. 190 RDA2 Fig. 3 (GM South Circle RDA2 l 1 i I l -1.0 -0.5 0.0 0.5 1.0 RDA1 Fig. 3.4. Plot of eastern American toad abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 191 RDA2 -1.0 -0.5 0.0 0.5 1.0 RDA1 Fig. 3.5. Plot of wood frog abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 192 RDA2 Fig. 3 for 11' Mich abUn RDA2 -1.0 -O.5 0.0 0.5 1.0 RDA1 Fig. 3.6. Plot of wood frog abundance in a Generalized Additive Model (GAM) surface for litter depth (cm) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 193 RDA2 -1.0 -0.5 0.0 0.5 1.0 RDA1 Fig. 3.7. Plot of spring peeper abundance in a Generalized Additive Model (GAM) surface for leaf litter depth (cm) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 194 10 RDA2 W/////j //////////° -LO -05 00 05 1D OD RDA1 Fig. 3.8. Plot of red-backed salamander abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 195 1.0 0.5 RDA2 0.0 -0.5 -1.0 -0.5 0.0 0.5 1.0 RDA1 Fig. 3.9. Plot of green frog abundance in a Generalized Additive Model (GAM) surface for overstory canopy cover (%) on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 196 SHB) as points in the data space because they do not have a gradient of change. Classes containing sites with high values for a particular species will tend to lie in close proximity to that species in the data space. For example, red-backed salamanders were associated with patches found in MCP soils and green frogs were associated with patches found in MCS soil associations (Figure 3.2). The variance explained by the full model, which consisted of three sets of environmental factors combined including habitat, weather, and site stratification was decomposed. Habitat variables accounted for slightly more variance (12.4%) than the categorical variables (soil type and ownership combined, 10.7%), however climate related variables accounted for considerably less (4.7%) (Figure 3.10). DISCUSSION Results indicated that amphibian and herpetofaunal species richness and diversity were related to a combination of factors with temperature and soil association as the most important variables. However when interpreting individual species habitat requirements and the factors that can influence community composition, a combination of environmental variables (overstory canopy cover, litter depth, and distance to the nearest water body), were most important. Land ownership did not play a significant role in my findings, suggesting that at least in my study area, SGWA and private lands support similar herpetofaunal communities. These findings are encouraging for herpetofaunal conservation, as private lands form the landscape matrix in most regions of the Midwest United States. Temperature and precipitation are critical to amphibians (Carey et al. 2001). 197 Categorical Habitat Residual = 71.8 Fig. 3.10. Percent of total variance in the herpetofaunal community data set in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys explained by habitat variables, site stratification variables, and weather variables, as well as variance explained by each combination of factors. Of the variation in the herpetofaunal community, 71.8% of the variance was left unexplained. 198 Breeding is initiated by a response to increasing temperatures and rainfall (Stebbins and Cohen 1995), and temperature and rainfall also affect the hydroperiod of a wetland (Pechmann et al. 1989), which in turn affects the rate at which tadpoles complete metamorphosis and emigrate from ponds. Univariate analyses, suggested that temperature, whether average minimum or average maximum, played a role in herpetofaunal species richness, amphibian species richness, and herpetofaunal species diversity. Warmer temperatures were indicative of greater species richness and greater species diversity. In all of the mixed models with repeated measures, minimum daily temperature, precipitation, and time period were included in the best models, but only minimum daily temperature and precipitation were significant. However, in all of the mixed models, which included habitat variables in addition to the weather variables, only temperature was found to affect species richness or diversity, with greater richness and diversity related to warmer temperatures. These results reinforce the importance of climatological variables in describing herpetofaunal diversity patterns across the landscape. Although microsite conditions such as overstory canopy cover, leaf litter, coarse woody debris (deMaynadier and Hunter 1995) and distance from the site to the nearest wetland (Knutson et al. 1999) are known to affect particular species occurrences and abundances, when focusing on average richness or average diversity, the requirements of individual species are not taken into account. For species richness, a species observed once in the sampling period (and that may have been dispersing through the area) has equal weight to a species that was actually using the area and observed every day during the sampling period. Individual species abundances and requirements are not considered 199 when looking at richness and diversity, however, when looking at individual species simultaneously, the constrained ordination effectively showed the importance of selected microsite conditions on individual species. Thus, it seems more appropriate to consider individual species abundances simultaneously to make the most effective management decisions. These two different types of analyses provided different results and when interpreting results solely on species richness or diversity, critical habitat requirements of individual species could be overlooked. Soil association contributed to all of the models but one (mixed model with repeated measures for herpetofaunal diversity). The soil information used to select sites for this research projected was Natural Resources Conservation Service 1994 STATSGO data. Although STATSGO soil associations were assessed on a broad scale, soil association MCP had an almost consistent lower mean response than the four other soil associations (MCS, MHE, SHB, and HCA), indicating lower richness and diversity. Because the soil associations are described on such a broad scale using multiple components and layers, it is difficult to quantify differences between them, particularly at the scale of herpetofaunal habitat response. Soil association MCP was dominated by fine, loamy soils that were not hydric and were well drained. However, components of the soil association contained loamy, poorly drained soils that had long pond duration (from November to May). Soil association HCA differed from MCP in that it had muck soils that were poorly drained. The soils were hydric and had very long pond duration (from September to June). Soil association MCS had fine loamy soils that were not hydric, but were somewhat poorly drained. Soil association MHE was dominated by loamy soils that were not hydric and were well-drained. Components of this soil 200 association had hydric soils that had very poor drainage and very long pond duration (from September to June). Finally, soil association SHB had soils that were dominated by loamy sand that were not hydric and were well drained. Components of this soil association were hydric, poorly drained, and had very long pond duration (from September to June). Most likely amphibians and reptiles were seeking out areas that contained these poorly drained soils (HCA, MCS, and SHB) because they were more conducive to supporting wetlands and the potential to hold water in vernal ponds throughout the breeding season. All soil associations contained areas with the potential to hold water throughout the breeding season; however, fine scale components of the soil association could not be mapped. In general, MCP soils tend to consist of drier soil components, most likely corresponding to lower herpetofaunal richness and diversity responses. The fixed effect of vegetation type did not contribute to any of the mixed models with repeated measures. Although wetlands are the primary breeding habitats for amphibians, forested areas are also an important component of amphibian life cycles. Many spend all or most of the non-breeding season in forested areas in shrubs, trees, or leaf litter and these forested areas can regulate temperature, as well as the rate of evaporation of surrounding wetlands (Knutson et al. 1999). My results suggest that forest type is not the important characteristic, but rather the amount of canopy cover regardless of forest type is important. Amphibian response to even subtle variations in average canopy cover were identified in this study reinforcing the observation that the effects of canopy cover on temperature and precipitation are probably important considerations for herpetofaunal diversity. 201 Vegetation type however did contribute to the mixed models for both amphibian and herpetofaunal species richness. For herpetofaunal species richness, the mean responses of upland hardwoods differed from pine stands and lowland hardwood stands. Mean herpetofaunal species richness was greater in the upland hardwoods. Amphibians tend to prefer mixed aged forests to even aged forests (deMaynadier and Hunter 1998) and most pine stands in my study area on both land ownership types were even-aged plantations. Amphibians have also been found to prefer deciduous forests over coniferous forests (Strijbosh 1980), and the pine stands where I sampled tended to be dry with very little to no understory or leaf litter. Five species that were found in upland hardwoods were not found in pine stands, but lowland hardwoods only differed from upland hardwoods by two species (Table 3.8). However, my analyses did not focus on total species richness, but on average species richness per sampling period. On average, upland hardwoods had more species observed per sampling period than either lowland hardwoods or pine stands. Although the main effect of vegetation type was different for amphibian species richness, the mean responses did not differ for any of the vegetation types. Therefore, the observed effects of vegetation type were more likely determined by reptile species and less by commonly occurring amphibian species such as wood frogs and eastern American toads. When conducting the constrained ordination and analyzing the herpetofaunal community data set in its entirety, I discovered that habitat variables were more important in explaining the variance in the data set than the most significant variable, temperature, in the univariate analyses. The most likely reason for this is that in the constrained ordination, individual species and their abundances are taken into consideration 202 simultaneously, whereas in the univariate analyses, the community data set is given a presence absence signature and regarded in terms of number of species present, but not which species are present. The constrained ordination demonstrates the potential bias that can occur when using richness or diversity metrics to manage for herpetofaunal species and the potential ramifications that could result when ignoring specific habitat and individual species requirements. It is clear that temperature affects species richness and abundance; however, my results suggest that when investigating factors that structure herpetofaunal community composition, individual habitat requirements must be considered. The landscape of southern Michigan is a mosaic of land ownership and land uses with differing degrees of naturalness. Land ownership did not show up as a significant descriptor of the herpetofaunal community; however land use should be taken into account when deciding and implementing management objectives, because SGWA do not exist in isolation. SGWA are affected by activities on adjacent or surrounding land which could alter habitat conditions and impact the effectiveness of management techniques. My study demonstrates that the southern Michigan landscape should not be managed as a monoculture, but should contain a diverse array of habitat types. If species need forested habitat and short distances to wetlands, areas adjacent to ponds or vernal pools should be left intact to act as buffers around the water bodies. For species like wood frogs to thrive, they require habitat with denser canopy cover and increased litter depth with vernal pools in close proximity. Spring peepers also need areas to be managed for increasing litter depth, while red-backed salamanders need habitat with denser canopy cover. Green frogs on the other hand require habitat with less canopy 203 cover and habitat generalists like eastern American toads require less canopy cover and tend to be more terrestrial using areas further away from water bodies. Herpetofauna have individual life history requirements and these requirements must be taken into consideration when managing for herpetofaunal diversity. To ensure conservation of herpetofauna on SGWA requires a broader consideration of the southern Michigan landscape. My results reinforce the ramifications of managing for herpetofauna solely within a stand and the how the juxtaposition of patch types can impact the herpetofaunal community. 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United States Department of Agriculture, Natural Resources Conservation Inventory, and National Soil Survey Center Miscellaneous Publication 1492, Washington, D.C., USA. 210 CHAPTER 4: EVALUATION OF THE EFFECTS OF LANDSCAPE PATTERN METRICS ON HERPETOFAUNA INTRODUCTION During recent decades, much attention has focused on the global decline of herpetofaunal populations, particularly amphibians, throughout the world (Kiesecker et al. 2001). Although all causes of amphibian declines have not been clearly determined, anthropogenic habitat modification including habitat loss and fragmentation from conversion of lands to agriculture, urbanization, and development is one of the best- documented causes of amphibian declines (Alford and Richards 1999). For example, both habitat loss and habitat fragmentation are considered to be main causes of amphibian declines in the Midwest United States (Lannoo 1998). Amphibians are perceived to exhibit a metapopulation structure (Skelly et a1. 1999, Hecnar and M’Closkey 1996) with several subpopulations occupying optimal habitat patches and using intervening habitat patches for movement between these high quality areas. Reptiles and amphibians (collectively called herpetofauna) use several, distinct habitats during varying parts of their life cycle and as a result may be particularly vulnerable to anthropogenic changes in the landscape fiom habitat modification, fragmentation, and loss (Regosin et al 2005). The term landscape complementation was first used by Dunning (1992) to describe the ability of species to link critical resources located in different habitat patches to complete their life cycles. Landscape complementation refers to the proximity of these species’ critical habitats to each other (Dunning et al. 1992) and connectivity refers to the ease of species’ movement between these habitats (Taylor et al. 1993). 211 Many herpetofaunal species depend on wetlands such as wooded vernal pools, streams, and river floodplains; adjacent terrestrial habitat; and connections between the two (Semlitsch and Bodie 2003, Calhoun et al. 2005). Ephemeral pools are considered important habitat for several herpetofaunal species such as wood frogs (Rana sylvatica) and blue-spotted salamanders (Ambystoma laterale) (Calhoun et al. 2005). These species prefer isolated wetlands that have seasonal hydroperiods and lack predatory fish (Morin 1983, Russell et al. 2002). Fragmentation of forested habitat can degrade habitat quality, especially for edge-sensitive species, and can eliminate continuous blocks of habitat, thereby reducing between patch access (Primack 2004). F ragrnentation can also lead to the wetland isolation which can firrther breakdown critical metapopulation processes. Maintaining connectivity between wetlands and terrestrial habitat is essential for herpetofaunal species that breed or lay eggs in wetlands and emigrate to terrestrial habitats to forage and overwinter (McDiarmid 1994). Research has been conducted at the landscape-scale to determine the relationship between herpetofaunal community compositions and the surrounding landscape or land- use patterns (e.g., Hecnar and M’Closkey 1996, Knutson et al. 1999, Hermann et al. 2005). Land uses such as agricultural or urban development reduces availability of optimal habitat, tends to reduce habitat suitability and landscape connectivity, and can have a negative impact on amphibian abundance and occurrence (Bonin et al. 1997, Hecnar 1997, Knutson et al. 1999). These land uses can also result in isolation of wetlands, which can lead to reduced species richness at isolated sites due to reduced interactions with other populations (Findlay and Houlahan 1997, Semlitsch and Bodie 1998, Lehtinen et al. 1999). Agriculture and urban land uses can also act as movement 212 barriers between populations reducing recolonization rates and reducing local species richness (Findlay and Houlahan 1997, Lehtinen and Galatowitsch 2001, Parris 2006). Development of road systems throughout the human-dominated landscape can result in the direct loss of habitat, fragmentation of habitat, and the degradation of habitat quality (Jackson 2000). It can also result in modification of an animal’s behavior such as altered movement patterns (Trombulak and Frissell 2000). Roads cause direct mortality which can reduce population sizes, as well as reducing movement between populations of species and their required resources (Carr et al. 2000). Road systems can act as movement barriers which can reduce access to high quality habitat and further isolate populations (Jackson 2000). In much of the Midwestern United States, the majority of historic land conversion resulted from draining wetlands and clearing land for agricultural practices (Brinson and Malvarez 2002). In southern Michigan, the landscape has been anthropogenically modified and presently consists of a mosaic of land uses including agriculture, forests, and urban development in both metropolitan and rural areas. Currently, Michigan is dominated by private lands (79%) with only 21% being publicly held (Michigan Department of Natural Resources 2000). Some portions of southern Michigan are being managed to conserve and restore wildlife resources by the Michigan Department of Natural Resources (MDNR) such as Michigan’s State Game and Wildlife Areas (SGWA). SGWA have been established and maintained to improve and restore wildlife populations and habitat and these areas are presumed to be essential components in the conservation of biological diversity throughout the state. Managing for species like amphibians that require the use of several distinct spatially discrete habitats can be 213 challenging in a landscape that is human dominated, particularly in areas that are urbanized (Gibbs 2000). This study provides an opportunity to investigate an anthropogenic modified mosaic of land ownerships and land uses, and to determine their influence on herpetofaunal communities. The objective of this study was to assess how patch characteristics over multiple scales influences (including land cover type, distance to roads, and distance to surface water) the occurrence and relative abundance of amphibians and reptiles on SGWA and private lands in the southern lower peninsula of Michigan. All capture, handling, and marking protocols were approved by the Michigan State University Animal Care and Use Committee (AUF# 07/03-082-00). METHODS To assess the influence of anthropogenic landscapes on herpetofaunal communities in the southern lower peninsula of Michigan, 82 sites were sampled on SGWA and on privately-owned parcels in the spring and summer of 2005 and 2006. Drift Fence Arrays Drift fence arrays made from 60 cm high aluminum flashing with pitfall and funnel traps were used to capture herpetofauna (Corn 1994, Enge 1997). Drift fences intercept herpetofauna moving on the ground and re-direct them into a pitfall or funnel trap. Drift fences with pitfall and funnel traps were installed in April and early May prior to opening the traps in mid-May. They were opened for 5 consecutive nights each month in 2005 and 4 consecutive nights each month in 2006 from May through August (Table 4.1) and were checked once daily. Three 5 m long sections of aluminum flashing were 214 Table 4.]. Dates drift fence arrays, pitfall traps, funnel traps and coverboards were opened in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006. Date Opened Date Closed Number of Sites 05/ l 7/2005 05/22/2005 20 05/24/2005 05/29/2005 22 06/06/2005 06/1 1/2005 20 06/14/2005 06/19/2005 22 07/1 1/2005 07/16/2005 20 07/19/2005 07/24/2005 21 08/05/2005 08/09/2005 20 08/10/2005 08/14/2005 21 05/08/2006 05/12/2006 1 7 05/1 5/2006 05/19/2006 14 05/22/2006 05/26/2006 9 06/06/2006 06/ 16/2006 1 7 06/12/2006 06/1 6/2006 20 06/ 1 9/2006 06/23/2006 3 07/05/2006 07/09/2006 1 7 070/9/2006 07/ 1 3/2006 3 07/12/2006 07/16/2006 20 07/31/2006 08/04/2006 20 08/07/2006 08/1 1/2006 20 215 installed in a Y arrangement and 4 pitfall traps and 6 funnel traps were placed within the array (see Fig.1 Enge 1997). Arrays were oriented to the north. Pitfall traps were made from 18.9 L buckets. Holes were drilled approximately 2 cm from the bottom of the trap to allow for drainage of rainwater (Enge 1997). The pitfall traps were buried slightly below ground level, allowing animals to drop into the bucket. Moistened sponges were placed in all pitfall traps to prevent desiccation of captured animals (Greenberg et al. 1994). The sponges were remoistened as needed (Enge 1997 , Richter and Seigel 2002). Traps were closed by placing lids over the buckets. Funnel traps were placed at the midpoint of each wing of the aluminum flashing in the array (Greenberg and Tanner 2005). Funnel traps were double entry with the main body comprised of aluminum window screening and the firnnels of flexible fiberglass screening. Traps had 20 cm openings at both ends with funnel openings of 5 cm in diameter (Corn 1994). When not in use, funnels traps were closed by inverting the funnels and clipping them shut. Coverboards Coverboards (F ellers and Drost 1994, Davis 1997) were placed within Im from the drift fence array in the four cardinal directions at least one week prior to drift-fence array installation. Coverboards were made of untreated birch plywood and cut into 1 m x l m sections and were placed on bare ground. Coverboards are designed to provide moist, cool refuge for herpetofauna (Houze and Chandler 2002) and create a microhabitat similar to a downed log. Coverboards were checked every day that the drift fence arrays were open. 216 Area Time-Constrained Surveys Area time-constrained surveys (ATC surveys) (Campbell and Christrnan 1982, Crump and Scott 1994) were conducted on each site once a month from May to August in 2006: 23 May — 31 May, 1 June- 2 June, 19 June — 27 June, 19 July — 26 July, 1 August — 12 August; and in June and July in 2005: 22 June — 30 June, 22 July — 31 July. A 2 m x 37 m area (the same total area as the drift fence array) was delineated to conduct the area time-constrained surveys, and this same area was used for surveys throughout the season. ATC survey areas were selected near the drift fence array in one of the four cardinal directions, starting east of the array. When a 2 m x 37 m area fit in the designated soil and vegetation type, it was georeferenced with a GPS unit and flagged. This designated area was hand-searched for a period of 20 minutes by overturning downed logs and rocks and searching through leaf litter. Decay classes of the logs were recorded according to the US. Forest Service’s FIA Field Methods for Phase 3 Measurements, five decay classifications (USDA Forest Service 2004) (Table 4.2). Mark-Recapture Techniques All animals captured by pitfall traps, funnel traps, cover boards, and area time- constrained searches were processed before being released. Herpetofauna were identified to species, sexed (when possible), and marked. All amphibians were measured (snout to vent length, mm); and northern leopard frog (Rana pipiens), American toad (Bufo americanus), and green frog (Rana clamitans) with a snout to vent length measurement > 50 mm were PIT tagged (passive integrated transponders; AVID®). Salamanders and all other Anurans were marked by toe-clipping except treefrogs and relatives, but not for individual recognition. Snakes and turtles were measured and marked for individual 217 Table 4.2. Five decay classifications of downed logs (US. Forest Service 2004) used in area time-constrained surveys in the southern Lower Peninsula of Michigan on SGWA and private lands in summer 2005 and 2006. Class Description L1 Bark intact, twigs present. Texture is intact. Wood is original in color. Log is elevated on supported points above ground. L2 Bark intact, twigs absent. Texture is intact to partially soft. Wood is original in color. Log elevated on support points but sagging slightly. L3 Trace of bark. Twigs are absent and texture is hard large pieces. Color of wood is original to faded. Log is sagging near ground. L4 Bark and twigs are absent. Texture of wood is small, soft, blocky pieces. Wood is light brown to faded brown or yellowish. All of the log is on the ground. L5 Bark and twigs are absent. Texture of wood is soft and powdery. Color of wood is faded to light yellow or gray. The diameter of the log is attainable wood and log debris is not spread out in a flat manner. If a diameter is not attainable, then it is not considered a log, but a pile of debris. 218 recognition. All snakes were marked by clipping half of one ventral scale (Brown and Parker 1976) and turtles were marked by notching marginal scutes (Cagle 1939). Individuals were released at least 5 m from the point of capture on the opposite side of drift fence to minimize the probability of immediate recapture. Landscape Analysis To quantify and characterize the landscape on SGWA and private lands, three different analysis distances (AD) were generated around each survey site at 100 m, 200 m, and 1000 m radii. The center of each AD was the center pitfall trap of each drift fence array. ADs of 100 m and 200 m were chosen to quantify and characterize the area in close proximity the survey point. An AD of 1000 m was chosen because it is a biologically relevant estimate of dispersal and migration distances for the species in my study area (Berven and Grudzien 1990, Stebbins and Cohen 1995, Lannoo 2005) and has been used in several other amphibian landscape pattern metric studies (e. g., Knutson et al. 1999, Guerry and Hunter 2002, Genet 2004, Price et al. 2004). Drift fence arrays sites were georeferenced in the field and the coordinates were displayed in ArcGIS (Environmental Systems Research Institute 2004). I analyzed landscape composition with a vegetation land cover data map developed by Michigan Department of Natural Resources (Michigan Department of Natural Resources 2001). The map was created from 1999-2001, had a 30 m pixel size and contained 7 level I classes of land use (Table 4.3). The land use classes were reclassified to include six land use types: agriculture (row crops, tilled crops, fields, orchards, vineyards, herbaceous Openland, low density trees, and parks, golf courses), forest (all forest types), wetlands (non-forested wetlands), water (ponds, lakes, and rivers), and urban (commercial, 219 Table 4.3. Landscape classes and IFMAP categories developed by Michigan Department of Natural Resources 1999-2001. Landscape Categories and Associated IFMAP Class Names and Grid Values Class Descriptions Urban Low Intensity Urban (Residential) (1) Intensity Urban (2) Airports (3) Roads / Pavement (4) Agricultural Non-vegetated agriculture (5) Row Crops (6) Forage Crops (7) Orchards/Vineyard/Nurseries(9) Openland Upland Herbaceous Openland (10) Low Density Trees (12) Parks, Golf Courses (13) Forested Deciduous Forest Northern Hardwoods (14) Oak Type (15) Aspen Type (16) Other Upland Deciduous (l 7) Mixed Upland Deciduous (18) Lowland Deciduous Forest (24) Coniferous Forest (CF) Pines (19) Other Conifers (20) Mixed Upland Conifers (21) Lowland Coniferous Forest (25) Upland Mixed Forest (22) Lowland Mixed Forest (26) Landareatrlledforcropproducnonwrth<2596 Land area >10% and <25% manmade structures, including paved and gravel roads and parking lots. Land area >25% solid impervious cover made from manmade materials, other than airports, roads, or parking lots. Impervious land within airport grounds, including runways. Roads or parking lots currently vegetated. Vegetation rs annual crops planted rri rows (e. g.j_" corn, soybeans). Vegetation used for fodder production (6. g. alfalfa, hay). Also includes land used for pasture, or non- tilled herbaceous agriculture. Woody trees not grown for Christmas trees. <25% of land area is covered by woody cover. The combination of woody shrubs and trees is >25% of the land area and >25% of the woody cover is trees. None mapped in SLP. Upland open land maintained for recreational purposes. Combination of maples, beech, basswood, white ash, cherry, and yellow birch >60% of the canopy. Proportion of oaks >60% of the canopy. Proportion of aspen >40% of the canopy. Proportion of any other single species >60% of the canopy. Proportion of deciduous trees >60% of the canopy. Proportion of deciduous trees >60% of the canopy. Proportion of pines >60% of the canopy Proportion of non-pine upland conifers >60% of the canopy. Proportion of coniferous trees >60% of the canopy. None mapped in SLP. Proportion of coniferous trees >60% of the canopy. Mixed forest not falling into any other category. Proportion of conifers: deciduous ranges between 40%:60% to 60%:40%. Mixed forest not falling into any other category. Proportion of conifers: deciduous ranges between 40%:60% to 60%:40%. Table 4.3. Con’t Nonforested Wetland Lowland Shrub (28) Proportion of lowland shrub >60% of non-water cover. Emergent Wetland (29) Proportion of emergent wetland >60% of non water cover. Mixed Non-forest Wetland (30) Non-forested wetlands not falling into any other category. Water Water (23) Proportion of open water >75% of the land area. Bare/Sparsely Vegetated Sand, Soil (31) Land cover is formed primarily of sand or bare soil. Exposed rock (32) Land cover is formed of solid rock. None mapped in SLP. Other Bare\Sparsely Vegetated (3 5) None. 221 industrial, and residential), and other. The road network data and depth to ground water data used in the analysis were obtained from the Michigan Geographic Data Library (Michigan Center for Geographic Information 2007). At each spatial scale, the following metrics were calculated: total area (m2) of each of the six land cover categories, total road length (m), mean depth to ground water (m), distance to nearest road (m), distance to nearest urban (m), and distance to nearest surface water (m). The total area (m2) of each of the six land cover categories was calculated at each scale using the focal sum firnction under spatial analyst tools. The total road length (m) was calculated by clipping the road layer with each buffer and the length of individual road arcs were recalculated using Hawth’s tools (Beyer 2004). The clipped road layer was intersected with the respective buffer and assigned to a sample site. The road lengths were summed by sample site to get the total road length within each buffer for each sample site. The mean depth to ground water (m) was calculated using the landscape characterization function under Hawth’s tools. In addition, the distance to nearest road (m) and distance to the nearest urban area (m) were calculated using the near command under spatial analyst tools. The distance to the nearest surface water (m) was calculated by extracting surface water <= 0 and creating a new layer fi'om this data. This layer was converted from raster to points and this created a point at that center of each 30m pixel on the surface water raster. The near command was used to measure the distance from each sample site point to the nearest surface water point. AD data were analyzed separately to determine landscape effects at the three different scales. Because of the potential for spatial overlap among sites and the ensuing lack of independence, only non-overlapping sites were included in the analysis. A 222 random selection process was used to select the non-overlapping sites fiom the site population. Statistical Analysis Mixed Model After examination of descriptive statistics and normal probability plots for original variables and potential data transformations, all variables were log transformed to normalize the data and homogenize variance. Certain criteria were used to select variables for inclusion in the model including R2, Adjusted R2, Cp (Mallows 1973) statistics, forward selection, and backward selection. Outliers, collinearity, residual plots, meaningfulness and interpretation were examined for candidate models. A mixed model was used to determine which variables (land ownership and landscape variables) were most influential in determining amphibian richness, herpetofaunal species richness, and herpetofaunal species diversity (collectively called herpetofaunal species abundance data) at the 100 m, 200 m, and 1000 m scale. The treatment design consisted of one fixed factor: land ownership with two levels (SGWA vs. private) and 11 potential random factors. Models were ranked by how well they explained amphibian richness, herpetofaunal species richness, and herpetofaunal species diversity data using Akaike’s information criterion corrected for small sample sizes (AICc) (Bumham and Anderson 2002). AICC was calculated as follows: AICc = -2*ln(likelihood) +2*K + (2*K*(K+l))/(n-K-l), where In is the natural logarithm, (likelihood) is the value of the likelihood, and K is the number of parameters in the model, n is the sample size (Bumham and Anderson 2002). Models were also evaluated using AIC weights (wi), which can be treated as the weight 223 of evidence in favor of a particular model, given the data set and the set of candidate models (Bumham and Anderson 2002). The factor main effects and the interaction effects were analyzed using ANOVA. When main effects were found to be significant (a < 0.05), a treatment comparison among the marginal means was conducted. The data analysis was conducted using PROC MIXED (SAS Institute 2002). Constrained Ordination To examine the relationship between herpetofaunal species and the environment using landscape variables, a constrained ordination was used. The constrained ordination was conducted using landscape variables at all 3 spatial scales for one independent data set. The herpetofaunal species abundance data were the response variables and the environmental data were the explanatory variables. The goal of the constrained ordination was to infer patterns in herpetofaunal species composition from patterns in the environmental variables. I removed species from my herpetofaunal community data set with less than 2 occurrences because they were most likely not sufficiently sampled and would not be accurately placed in ecological space. Of 18 species sampled, 12 species were retained (Table 4.4). The species data were highly skewed and heteroskedastic, so the data was log transformed as well as column normalized using R 2.4.0 (R Development Core Team 2006) Twelve explanatory random variables were included in the environmental data set for each of the 3 different spatial scales including distance to the nearest surface water, distance to the nearest road, distance to the nearest urban area, and landscape variables total road length, mean ground water depth, and the total area of land class (agriculture,: 224 :83 329:8 no.“ 3~€8v=8m 2 00cnv==nm?» 98 <>>Om co 380:8 800 .mmmbmem 83530 3:85:00 05 5 39:05 360% 3503330: .2 0% mo Ammo 0020953 3N€So§am .808 one 380 Z .vé 030,—. 225 forest, open water, wetland, urban, and other). The data set was assessed for multicollinearity issues by computing Pearson product-moment bivariate correlations between pairwise combinations of variables (Ott and Longnecker 2001). Variables with high correlations > :t 0.7 indicated potential multicollinearity problems. Variance inflation factors (V IF) were also assessed for each variable. A deviation of VIF from 1 indicates a tendency toward collinearity and VIF can be used to measure multiple correlations between an individual variable and the other variables in the data set (Chatterjee et al. 2000, Ott and Longnecker 2001). A high VIF (> 10) indicates that the variable is highly correlated with other variables (Chatterjee et a1. 2000). To achieve a parsimonious suite of explanatory variables to include in the constrained ordination, I subjected the environmental variables to forward stepwise variable selection and backward elimination using Akaike’s information criterion (AIC) (Akaike 1987). The random variables chosen for the model were 4 land class categories: urban at a 100 m scale, wetland at a 200 m scale, forest at a 200 m scale, and wetland at a 1000 m scale. The fixed effect of ownership was also included in all models. To determine whether a linear response model (Redundancy Analysis (RDA), Constrained Analysis of Principle Coordinates (CAPSCALE)) or unimodal response model (Canonical Correspondence Analysis (CCA)) was the most appropriate for the constrained ordination, I conducted a Detrended Correspondence Analysis (DCA) (Hill and Gauch 1980) to evaluate three items. First, I calculated the gradient lengths of the DCA axes, which are the lengths of the ordination axes in terms of standard deviations in the rate of change in species composition (Knut et al. 2003). A length greater than four is indicative of a unimodal response (bell-shaped response curve) because it allows species 226 to demonstrate a rise and decline in abundance and shorter lengths (< 2) indicate a linear response (a straight line response). The gradient lengths for my community data set were between 1 and 3, indicating that a linear response model was most likely appropriate (Table 4.5). Second, I produced a joint plot of sites and species (Figure 4.1). In my joint plot, I found that most species were located outside of the distribution of my sites, indicating that the species optima was located outside the range of my sites and that the maximum abundance was predicted to be outside of the range of my sampled sites. Because the species optima did not rise and fall within the range of my sites, a unimodal response model was not appropriate, and therefore a linear response model best described the response model (Figure 4.1). Third, I looked at the species’ fitted curve on each axis. These showed a mixture of unimodal and monotonic responses. Based on the above criteria, I used a Redundancy Analysis (Rao 1964), which is a linear response model, in combination with chord distance (row normalization). Standardizations such as chord distance are recommended for use with RDA to circumvent problems associated with using Euclidean distance for the analysis of community data sets (Legendre and Gallagher 2001). To interpret species’ responses to major environmental gradients, I produced a biplot of the significant model. The biplot demonstrated the relationship between species, the environmental variables, as well as the ordination axes derived from the species data (ter Braak and Smilauer 1998). Species are represented by points and environmental variables by vectors, which point toward rate of maximum change and extend in both directions (ter Braak 1986). The length of the vector indicates its importance to the constrained ordination (ter Braak 1986). Perpendiculars drawn from 227 Table 4.5. Gradient lengths of the ordination axes from the Detrended Correspondence Analysis (DCA). Herpetofaunal community data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. DCA1 DCA2 DCA3 DCA4 Eigenvalues 0.372 0.204 0.131 0.143 Decorana Values 0.379 0.155 0.097 0.048 Axes lengths 2.517 1.460 1.515 1.425 228 AMT] ‘— .. 3 THSA Sf , 3 1 10 U 2 E 1 : BUAM o ‘_ 2 16 I O" _ PSCR "2 - PSTR 1 l I i l I l 1 -3 -2 -1 0 1 2 3 4 DCA1 Fig. 4.1. Joint plot of species and sample sites. Species shown in red and represented by codes (see Table 4.4) and sites shown in black numbers. Species fall outside of sites indicating that a linear response model is appropriate. Herpetofaunal community data collected on SGWA and private lands in the southem Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall naps, funnel traps, and coverboards and area-time constrained surveys. 229 species to vectors give the approximate ranking of that species’ response to the environmental variable and indicate the species’ optimum on that variable (ter Braak 1986). A smaller angle between the vector and the ordination axis indicates a greater relationship of the variable to the derived constrained ordination gradient (Grand and Mello 2004). To aid in interpretation, generalized additive models (GAMs) were used to fit surfaces of explanatory variables to the ordination scores. A surface of parallel, straight contours is indicative of a variable that lies linearly across the ordination space and also indicates that the relationship between the variable and ordination space is effectively represented by the linear biplot vector (Oksanen 2007). The data analysis was conducted with R 2.4.0 (R Development Core Team 2006). RESULTS Three land cover types dominated the landscape at all three spatial scales: forest, agriculture, and wetland. In both the 100 m and 200 m AD, forest was the dominate land cover type around the sampling sites, comprising 77% of the total AD area and 64% of the total area, respectively (Table 4.6). This is consistent with how site selection was conducted as the study was designed to characterize herpetofauna of forested communities. However, in the landscape 1000 m from the survey site, agriculture was the most dominate land cover type, comprising 44% of the total AD area (Table 4.6). At the 100 m scale, two other land cover types comprised 11% each of the total AD area: agriculture and wetland (Table 4.6). Water and urban made up less than <0.01% of 230 3.0 50.8 92.2 adv 3: Ma adv 2: o merge m; 88.3 53%. Ed 8%.: 33; :.o 23 $3 $52253 Nod :33 83.: 5o 3: E adv as me 96:35 .86 gas: 31.8 5.0 8me 5w adv a: .2 mavens, :26 one $3.8: 26.02; 3o sons $5.0 Rd 5.3 32.8 $8528 36 23.3.: $0.83 85 Azod was :.o $3 $3 £5 ea_8&< .85 GE 502 .85 Q8 502 can Ame 50: e 82 a com a 2: 0385/ .25 H260 2:: some 3 vomtmfioo 88 Q< 33 2: mo :oEomoa 05 manomoaoa .995 98 A3" ZV E 83 ”Gm" Zv 8 com x3. .I. 7c 8 o2 new 8% :08 5 8% 33.0. _E 88m Ammv £88 333% @8308? :2: £538 v.8 mos—Hg .8ng 38228 :03 55:5 ANEV new :39 on. 380358 $95 530 9:2 =< doom can moon E §wEom2 mo 235:3 533 c.8538 05 E 838 332mm 085 05 “a 38.0.38 893 .530 98— mo QEQSm .3“ 28d. 231 the total AD area within 100m of the survey sites and the other landscape category was not present (Table 4.6). In the landscape up to 200 m from the survey site, a similar pattern was observed with agriculture covering 20% and wetland covering 14% of the total AD area (Table 4.6). Open water and urban both comprised 1% each of the total AD area (Table 4.6). In the landscape up to 1000 m from the survey site, forest comprised 39% and wetland comprised 13% of the total AD area. Open water and urban both comprised 2% and other comprised less than <0.01% (Table 4.6). There was an average road length of 18.9 m (5.8 SE) within the 100m AD area; an average road length of 111.5 m (24.4 SE) within the 200m AD area; and an average road length of 4,575 m (372.9 SE) within the 1000 m AD area (Table 4.7). There was an average ground water depth of 1.9 m (0.3 SE) within 100m of survey sites; an average ground water depth of 1.8 m (0.4 SE) within 200m of survey sites; and an average ground water depth of 2.5 m (0.4 SE) within 1000 m of survey sites (Table 4.7). Because data sets differed (75 sites at 100m; 55 sites at 200m; 25 sites at 1000m), the average distances to the nearest road, urban area, and surface water differed among landscape scales. The average distance to road was the greatest for the 200 m data set (Table 4.7) and the average distance to the nearest urban area was greatest for the 100 m data set (Table 4.7). The average distance to the nearest surface water was greatest for the 1000 m data set, followed by the 100 m data set (Table 4.7). Mixed Model - 100 m Scale Amphibian Species Richness The mixed model for amphibian richness with the best fit (lowest AICc value) included one fixed effect (owner) and one random effect (forest (m2) (Table 4.8). The 232 Table 4.7. Summary of landscape variables measured at the three spatial scales in the southern Lower Peninsula of Michigan in 2005 and 2006. Water depth represented the average of ground water depth (m) within each AD; surface water represented the distance from survey site (m) to nearest surface water; distance- road represented the distance from survey site (m) to the nearest road; road length represented the total length of roads (m) contained within each AD; distance-urban represented the distance from survey site (m) to the nearest urban area. Values are means and their associated standard errors (SE) from all study sites in each data set: 100 m (N = 75); 200 m (N =55); 1000 m (N =25). Variable 100 m 200 m 1000 m (n=75) (n=55) (n=25) Mean (SE) Mean (SE) Mean (SE) Water depth (m) 2 (0) 2 (0) 2.0 (0) Surface water (m) 52 (7) 50 (7) 58.3 (12) Distance-road (m) 286 (20) 289 (24) 244.1 (3 5) Road length (m) 19 (6) 1 12 (24) 4575.9 (373) Distance-urban (m) 288 (23) 273 (23) 258.6 (39) 233 20.00:: 05 :8 05 £208.80: me 0:83: 0:0 .95 2303 00:82 .623 0?. 0.620.— .Aoozv 00388 :35 Sm 00:00:00 :otoEU 3:08:85 0.00:8? 0:205 230% a o mofio wmd $.th SEEN hue: + $003-00:st + BBQ + .052: m nmfio SN ovSmm SRO: .033 + Bazox. + 0:30 m 83 SN Elma $00.3 :88 + 203:. + 02:8 m oemd 3.0 2.6mm 3:300:83: + ESQ + 00:08 v 03.0 00.0 mmfiwm 203\ + :33: 0: _3 024 .02 082 .m>0>.8m 00:35:00 083-003 0:0 $808030 0:0 .80: 3:5: .30: 20.3: 53> @0338 $3.5 00:0» at: .3 8:398 :0 00mm: ooom :5 moom 8883 :m SwwEom—z mo 335:0: .8304 :0 E0538 0:: 5 £09: 033:: 98 <>>Om :0 038 E 2: 8 «£08.: 005:: $0.33.. 860% 5529:: 50: m :8 8:03. 01¢. .3. 030:. 234 model with owner, forest, and distance to nearest road had a similar AICc value, but I did not select it because distance to the nearest road did not contribute to the model (P > 0.05). The effect of ownership was not significant (P = 0.23) (Table 4.9), but the random effect of forest was significant (P < 0.01) (Table 4.9). Amphibian species richness had a positive relationship with forest (P < 0.01) (Table 4.10). Herpetofaunal Species Richness The mixed model for herpetofauna] species richness with the best fit (lowest AICc value) included one fixed effect (owner) and one random effect (forest (m2) (Table 4.11). The model with owner, forest, and distance to nearest road had a similar AICC value, but I did not select it for the same reason as with amphibian species richness, because distance to the nearest road did not contribute to the model (P > 0.05). The effect of ownership was not significant (P = 0.11) (Table 4.12), but the random effect of forest was significant (P < 0.01) (Table 4.12). Herpetofaunal species richness had a positive relationship with forest (P < 0.01) (Table 4.10). Herpetofaunal Species Diversity The mixed mode] for herpetofaunal diversity with the best fit (lowest AICc value) included one fixed effect (owner) and one random effect (forest (m2) (Table 4.13). There were several other models with similar AICc values, but these models were not selected because the other variables included in these models: distance to the nearest surface water (P = 0.50) and total road length (P >0.05) did not contribute to the model. The effect of ownership was not significant (P = 0.21) (Table 4.14), but the random effect of forest was 235 Table 4.9. Type 3 fixed effects and solution for random effects for amphibian species richness mixed model at 100 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation F Value Pr>F Owner 1.45 0.23 Type of Variation t Value Pr>F Forest 3.73 < 0.01 236 Table 4.10. Correlations between landscape variables and amphibian richness, herpetofaunal species richness, and herpetofauna] species diversity at the 100 m scale using Pearson’s Correlation Coefficients. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area- time constrained surveys. Variable Amphibian Herpetofaunal Herpetofaunal Richness Richness Diversity R2 (P-value) R2 (P-value) R2 (P-value) Distance to surface water (m) 0.02 (0.88) -0.05 (0.65) 0.01 (0.92) Mean ground water depth (m) -0.17 (0.14) -0.22 (0.06) -0.24 (0.04) Distance to nearest road (m) 0.0] (0.94) 0.06 (0.60) 0.15 (0.21) Total road length (m) 0.17 (0.14) 0.14 (0.25) 0.03 (0.83) Distance to nearest urban (m) 0.09 (0.45) 0.03 (0.82) 0.08 (0.48) Total agriculture area (m2) -0.22 (0.06) -0.11 (0.35) -0.15 (0.19) Total forested area (m2) 0.42 (< 0.01) 0.38 (< 0.01) 0.35 (< 0.01) Total urban area (ml) -0.03 (0.79) -0.05 (0.65) -0.03 (0.80) Total open water area (m2) N/A N/A N/A N/A N/A N/A Total wetlands (m2) -0.09 (0.45) -0.05 (0.66) -0.05 (0.67) Total other (m2) N/A N/A N/A N/A N/A N/A 237 .2808 2: Ba 06 820823 go 838:: 98 63v 5203 8:82 .023 02 3:22 501$ $388 :25 Ba cocooboo :otoEU 838885 Poo—EVE. own—2: 338m a m 8; EN 2:3 Swag. 32 + ~85: 52:8 0 wfld we; 2.3m hoormoacfin + Summificamxé + 3.on + .5230 m ago E; 3.2% Snowbauimsu + asst: bake m Emd 3:0 233 Egmczswfi + “853+ 88.8 v ommd 86 3.8». EEQ+ base 2 E 0:2 002 382 .9333 3.55:8 06:-83 28 "6309630 can £995 355% .895 zflzm :23 33:8 993.3 85% are .3 $538 no woman woom 28 moom 5883 E gwfioaz MO 23595 .533 c.5558 2.: E mun—.2 033a Ea <>>Om co 2an E 2: 8 «£288 8me mmofiot 86on _ncséowofion “was m 8m $83. 02 A 3“ 2an 238 Table 4.12. Type 3 fixed effects and solution for random effects for herpetofaunal species richness mixed model at 100 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation F Value Pr>F Owner 2.67 0.11 Type of Variation t Value Pr>F Forest 3.73 < 0.01 239 £088 2: com CC £80888 «0 398:: 98 65 Emma», 8:82 .623 02 03:28 .Aoozv 8388 :95 8.“ 388.50 cor—Btu song—:85 98.52 3205 £8an a m memo cwd wmdw Sawhxm~c§M>a+ >83K+ $238 0 v5.0 nod 2.0m 5M5: has + .333 8683“. + ESQ? .6838 m Sad one :3 53$ ES + $3? $238 w Smd Omd whww $3.: 8655. + BEQP .5830 v mvwd ood wiww 3.me + .558 M :5 024 00?. 3on .9333 8:85:00 Bureau 98 $53838 was .395 353% £95 anti 53, @2950 992.8 85m $8 3 8593 no woman coom 28 moon 8883. E gwfioaz mo 335:3 533 c.6558 05 5 $52 Bu>tm Ea <3Om co 28m E o3 3 «20on 3me bacozw 860% “scammeofio; «won m com 888 02 .m _ .v 2an 240 Table 4.14. Type 3 fixed effects and solution for random effects for herpetofaunal species diversity mixed model at 100 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation F Value Pr>F Owner 1.62 0.21 Type of Variation t Value Pr>F Forest 3.31 < 0.01 241 significant (P < 0.01) (Table 4.14). Herpetofaunal diversity had a positive relationship with forest (P < 0.01) (Table 4.10). Mixed Model — 200 m Scale Amphibian Species Richness The mixed model for amphibian richness within 200 m of the survey site with the best fit (lowest AICc value) included one fixed effect (owner), and two random effects (water (m2) and forest (m2)) (Table 4.15). The effect of ownership was not significant (P = 0.82) (Table 4.16), but the random effects of water (P < 0.01) and forest (P = 0.03) were significant (Table 4.16). Amphibian species richness had a negative relationship with water (P < 0.01) and a positive relationship with forest (P < 0.01) (Table 4.17). Herpetofaunal Species Richness The mixed mode] for herpetofaunal species richness within 200 m of the survey site with the best fit (lowest AICc value) included one fixed effect (owner), and two random effects (water (m2) and wetland (m2)) (Table 4.18). The effect of ownership was not significant (P = 0.12) (Table 4.19), but the random effects of water (P < 0.01) and wetland (P < 0.01) were significant (Table 4.19). Herpetofaunal species richness had a negative relationship with water (P < 0.01) and a positive relationship with wetland (P < 0.01) (Table 4.17). Herpetofaunal Species Diversity The mixed model for herpetofaunal species diversity within 200m of the survey site with the best fit (lowest AlCC value) included one fixed effect (owner), and two 242 20008 08 .8.“ O: 008080.88 mo 00388 .80 63V 5%?» 00:82 .623 02 0.8200 .AQUZV 008800 :80 8.“ $00,000.80 :20in 8:05.85 0.0v=§< 09:05 0:300m a 0 «~80 00; 30mm 353.: + 2.03.: $3: + 00.38 0 $3 cm; 9.08 25302.00 + $3.: + Essa m mid 3; mmémm 8520.: + .03.: + 0058 v oomd wwd ooémm .68.: + 8:30 0 ommd cod Edam 0003.: $3... + 00.38 m .3 0:3 002 322 0.880 008800800 083-0000 can 080000080 cam .098 #088 .098 €0.38 53» @0838 0.308 080m «30 ‘3 00.8800 so 0008. ooom 80 meow $8830 8 53:22 mo «80:83 0033 808300 05 8 00:0— 0:03.8 88 <>>Om co 0300 8 com 00 “20008 @058 00083.. 006080 8053880 0009 m How 00800 0?. .m _ .v 033. 243 Table 4.16. Type 3 fixed effects and solution for random effects for amphibian species richness mixed model at 200 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation P Value Pr>F Owner 0.05 0.82 Type of Variation t Value Pr>F Water -2.99 < 0.01 Forest 2.3 1 0.03 244 Table 4.17. Correlations between landscape variables and amphibian richness, herpetofaunal species richness, and herpetofaunal species diversity at the 200 m scale using Pearson’s Correlation Coefficients. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area- time constrained surveys. Variable Amphibian Herp Richness I-lerp Diversity RiChDESS R2 (P-value) R2 (P-value) R2 (P-value) Distance to surface water (m) 0.07 (0.61) -0.01 (0.92) 0.08 (0.59) Mean ground water depth (m) 0.04 (0.78) -0.01 (0.95) -0.07 (0.64) Distance to nearest road (m) -0.07 (0.62) -0.01 (0.96) 0.23 (0.10) Total road length (m) 0.10 (0.47) 0.08 (0.58) -0.17 (0.22) Distance to nearest urban (m) 0.18 (0.20) 0.10 (0.45) 0.18 (0.20) Total agriculture 31330112) -0.01 (0.96) <-0.01 (0.98) -0.09 (0.51) Total forested area (m2) 0.37 (<0.01) 0.38 (<0.01) 0.37 (<0.01) Total urban area (m2) 0.03 (0.85) 0.09 (0.50) -O.ll (0.44) Total open water area (m2) -0.40 (<0.01) -0.44 (<0.01) —O.48 (<0.01) Total wetlands (m2) 0.28 (0.04) 0.36 (<0.01) 0.33 (0.01) Total other (m2) -0.07 (0.61) 0.04 (0.80) <0.0] (0.99) 24S 20008 05 no.“ 06 000008083 mo 0038:: 080 63v 3303 00:82 A023 0?. 006200 A003; 003800 :80 Ba 0080800 82002.5 803088.8— 0.0V=0x< 00208 0.0—30¢ a K. 2:6 mm: 006mm “00.8? 0.5030.th + 08203 + .033 + .0238 m 0.1.0 om; ~5me N00xo\+ 008.: + 00830 0 mid m: 00.03 3,sz + 050203 + .03: + 0238 o bmmd mmd mnhmm 00530th + 38:03 + 008.: + 00:30 0 oomd cod mmdmm 02020.: + .03.: + 0020 m _3 03a .02 082 033:0 008080800 083-0000 080 08008030 080 .088 #083 .0808 :88 53> 008000 0380 00.0% «£0 E 008800 so 00009 003 080 moom 008830 8 803:022 Mo 0308:?“ 00304 805300 05 8 0083 0003.8 080 <>>Om so 2000 8 com 00 a20008 0058 0008520 006080 3800.08080: 0000 m 08 00800 02 .w _ .v 030% 246 Table 4.19. Type 3 fixed effects and solution for random effects for herpetofaunal species richness mixed model at 200 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, fimnel traps, and coverboards and area-time constrained surveys. Type of Variation F Value Pr>F Owner 2.53 0.12 Type of Variation t Value Pr>F Water -3.85 < 0.01 Wetland 2.86 < 0.01 247 random effects (wetland (m2) and water (m2) (Table 4.20). The model with owner, water, wetland, and average ground water depth had a similar AICc value, but I did not select it because average ground water depth did not contribute to the model (P > 0.05). The effect of ownership was not significant (P = 0.16) (Table 4.21), but the random effects of water (P < 0.01) and wetland (P 0.02) were significant (Table 4.21). Herpetofaunal species diversity had a negative relationship with water (P < 0.01) and a positive relationship with wetland (P = 0.01) (Table 4.17). Mixed Model — 1000 m Scale Due to the high correlation between forest and agriculture (R2 = 0.84, P = <0.0l) in the 1000 m data set, it was difficult to choose between them in defining the best model. Therefore, I ran two separate analyses: one using agriculture in the model and the other using forest in the model. I selected the best five models fiom the two different sets of analyses for each of my three dependent variables: amphibian species richness, herpetofaunal species richness, and herpetofaunal species diversity. Amphibian Species Richness The mixed model for amphibian species richness within 1000 m of the survey site with the best fit (lowest'AICC value) included one fixed effect (owner), and two random effects (agriculture (m2) and water (m2)) (Table 4.22). There were several competing models with similar AICC value, and the model with forest and water could most likely be used interchangeably. The effect of ownership was not significant (P = 0.77) (Table 4.23), but the random effects of agriculture (P < 0.01) and water (P 0.02) were 248 0.002: 0:: :8 0: 00808000: 00 50:3: 0:0 A05 Ems? 8:002 A023 0?. 03003: 60?; 003800 :20 :8 00:00:00 :otato 0000808:— 0.0x_0x< 00205 0:000m 0 0 mm mo 0N; owfim SM:& .003 + 050203 + .0009: + 00530 0 02.0 «N: 00.00 000kox+ 000002 + 0000.: + .0238 0 300 00.0 00.00 0000Q+ 0000.: + 00020 0 2N6 vmd 36m fin§§3§®§ + .3820? + 003: + 00:30 0 mwmd ocd 00.00 02000;» + 00003 + 00030 0 _3 020 .02 .0032 000350 0050:0900 080-0000 0:0 0000000030 0:0 .30.: _0::£ .000: =0.ta 0:3 003:8 000000 00:00 £00 >0 0003000 :o 0000: 000w 0:0 meow 008850 E :0w3032 mo 00:05:90 0033 E0538 0.0 E 00:0— 000>wa 0:0 <>>Om :o 2000 8 com 00 00300:: 0002:: 300030 006000 0050009080: 0000 m :8 00:80 02 .om.v 030... 249 Table 4.21. Type 3 fixed effects and solution for random effects for herpetofaunal species diversity mixed model at 200 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation F Value Pr>F Owner 2.05 0.16 Type of Variation t Value Pr>F Water -4.15 < 0.01 Wetland 2.59 0.02 250 $0008 0:: :8 Co 8808803 :0 :0083: 0:0 6:3 Ems? 00:00? A023 0?. 03:20: A025 003800 =080 :0: 00:00:00 :otBtU 80088:: 0.00000? 0020:: 0:003: 0 n. momo nmo oo.wo~ =00§00=8§0 + 53$ :88: + 0083 + 000.:o\ + .6208 v momo nmo ow.mo: :00:0\+ 00:30 v 08.0 00.0 00.8: 0:539:00 + 002.30 m ammo moo om.moH :03: + ESQ? 50:30 0 Ed 00.0 00.00: 0000:: + 0:330:00 + 00030 0: :3 020 00?. 0002 .0>0>::0 0080:0800 080-080 0:0 00:08:38 0:0 .030: 385.: .030: =0.t3 £05 003:8 0%080 00:0,: 5:0 :3 008300 :0 0000: 0oo~ 0:0 moom :088s0 8 58:32 «:0 00:08:03 5301: 805300 0:: 8 00:0— 0:033 0:0 <>>Om :o 0:000 8 ooo: :0 020008 00:28 00080:: 00:00:00 8050380 :00: m :0: 00:80 02 .NNé 030B 251 IT—¥— Table 4.23. Type 3 fixed effects and solution for random effects for amphibian species richness mixed model at 1000 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation F Value Pr>F Owner 0.08 0.77 Type of Variation t Value Pr>F Agriculture -3.36 < 0.01 Water -2.56 0.02 252 significant (Table 4.23). Amphibian richness had a negative relationship with both agriculture (P <0.01) and water (P = 0.17) (Table 4.24). Herpetofaunal Species Richness The mixed model for herpetofaunal species richness within 1000 m of the survey site with the best fit (lowest AICc value) included one fixed effect (owner), and three random effects: forest (m2) and water (m2), and road length (m2) (Table 4.25). The effect of ownership was not significant (P = 0.06) (Table 4.26), but the random effects of forest, water, and road length were all significant (P < 0.01) (Table 4.26). Amphibian richness had a positive relationship with forest (P = 0.01) and road length (P = 0.12), and a negative relationship with water (P = 0.46) (Table 4.24). Herpetofaunal Species Diversity The mixed model for herpetofaunal species diversity within 1000 m of the survey site with the best fit (lowest AICC value) included one fixed effect (owner), and one random effect: agriculture (m2) (Table 4.27). There were several competing models with similar AICc value, including a model with ownership and forest and a model with ownership and road length. The effect of ownership was not significant (P = 0.06) (Table 4.28), but the random effect of agriculture was significant (P = 0.02) (Table 4.28). Herpetofaunal diversity had a negative relationship with agriculture (P = 0.02) (Table 4.24). Constrained Ordination The five landscape variables selected accounted for 36.4 0/o of the total variation in the herpetofaunal community data set (Table 4.29). The full model was significant 253 Table 4.24. Correlations between landscape variables and amphibian richness, herpetofaunal species richness, and herpetofaunal species diversity at the 1000 m scale using Pearson’s Correlation Coefficients. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, fimnel traps, and coverboards and area- time constrained surveys. Variable Amphibian Richness R2 (P-value) Herp Richness R2 (P-value) Herp Diversity R2 (P-value) Distance to surface water (m) Mean ground water depth (m) Distance to nearest road (m) Total road length (m) Distance to nearest urban (m) Total agriculture area (m2) Total forested area (m2) Total urban area (m2) Total open water area (m2) Total wetlands (m2) Total other (m2) 0.18 0.07 -0.31 0.09 0.22 -O.52 0.51 -0.2l) -O.29 0.49 0.03 (0.41) (0.76) (0.15) (0.68) (0.30) (0.01) (0.01) (0.36) (0.17) (0.02) (0.90) 0.13 0.08 -O.32 0.32 0.07 -0.54 0.54 0.03 -0.15 0.49 0.25 (0.55) (0.71) (0.12) (0.12) (0.73) (0.01) (0.01) (0.89) (0.46) (0.01) (0.24) 0.24 0.05 -O.ll 0.39 0.08 -0.47 0.45 0.06 -0.03 0.43 0.24 (0.24) (0.80) (0.62) (0.06) (0.72) (0.02) (0.03) (0.77) (0.90) (0.03) (0.25) 254 80008 08 :8 Co 0.8008800 .80 .8080: 0:0 630 80803 088?. A023 02 0800—0: A0020 008800 =080 :8 00:08:00 08:08.5 8:08:88 0.000002 000.08 000008 0 0 bmoo oow :0: 000200 000.: + 00000: + 000000.200 + 00030 0 :00 00.0 00.0: 000000200 + 000.00 v Nmoo mmd ofim: 00000\+ 00:30 N. mm _.o No.m 00.02 2000000830 + 000000 0000 + 00003 + 000:0\+ 00:30 0 20.0 00.0 00.00: 000000 0000 + 00000 + 000% + 00000 0: _a 020 00?. 0002 00000.80 00808080 080-080 0:0 00.008950 0:0 .0008 0:88 .0008 :88: :83 003000 000::0 00:8 8:0 3 00.8800 :0 00000 woom 0:0 moom :08800 8 :00 882 .80 00:08:00 :0304 808000 08 8 00:0— 0:03.8 0:0 <>>Om :0 2000 8 83 :0 080008 0088 00080:: 0080000 380000080: 0000 m :8 00:000 0000 .30 050,—. 255 Table 4.26. Type 3 fixed effects and solution for random effects for herpetofaunal species richnws mixed model at 1000 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation P Value Pr>F Owner 41.5 0.06 Type of Variation t Value Pr>F Forest 4.55 < 0.01 Road length 4.70 < 0.01 Water -4.66 < 0.01 256 20008 05 :8 Co 80080.00 00 :0980: 0:0 A03 8003 00000000 A023 02 08:20: A0083 003800 :85 :8 00:00:00 :8:08:0 8:08:88 0.080000. 00808 000008 0 0 0.8.0 00.: 00.00 000000 00000 + 000000 + 000000 0 00:0 8.: 00.00 00000.0 + 00000 0 000.0 00.0 00.00 00000: 0000 + 00.00 .0 000.0 00.0 00.00 00000x+ 000000 0 000.0 00.0 00.00 000000.000 + 000.00 M :3 0830 0030 00002 00380 00808800 080080 0:0 000080060 0:0 0000:: 6:88 .0008 :88: 805 008000 000::0 00:8 8:0 03 008800 :0 00000 ooom 0:0 moom :08800 8 :00882 00 0:08:00 :033 E08000 08 8 00:8 008:: 0:0 «.300 :0 2000 8 ooo: :0 020008 0088 080880 0080000 3880:0800 0000 m :8 00:000 030 .000 030,—. 257 Table 4.28. Type 3 fixed effects and solution for random effects for herpetofaunal species richnass mixed model at 1000 m scale (a = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drifi fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. Type of Variation F Value Pr>F Owner 0.27 0.61 Type of Variation t Value Pr>F Agriculture -2.38 0.03 258 Table 4.29. Summary of the results of the constrained ordination for herpetofaunal community data explained by the landscape variables. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Inertia Proportion of Variance Total 0.396 1 .000 Constrained 0.144 0364* Unconstrained 0.252 0.636 *Proportion of variance explained is calculated by dividing the sum of canonical eigenvalues by the total inertia (sum of unconstrained eigenvalues). 259 (P < 0.005) according to the Monte Carlo permutation test, which indicates that the proportion of species variance explained by the environmental constraints was greater than expected by chance. Monte Carlo permutation tests also showed that the first canonical axis (RDA1) was significant (P = 0.01) (Table 4.30). Three of the variables (urbanlOO, forestZOO, and wetlanleOO) were significant (P < 0 .05), but land ownership and wetland200 were not significant (P > 0.05) (Table 4.31). The first axis explained 26% of the total species variance (eigenvalue/total inertia*100). This axis was a gradient of increasing total area of forest land cover at a 200 m scale, increasing total area of wetland land cover at a 1000 m scale, and increasing total area of urban land cover at a 100 m scale. The second axis explained 5% of the total species variance. This axis was a gradient of increasing total area of wetland land cover at a 1000 m scale. In the biplot, perpendicular projections of species points on the environmental gradients explain the associations of individual species. For example, eastern American toads were associated with landscapes that contained increasing amounts of urban areas at a 100 m scale and less total forest area at a 200 m Scale (Figures 4.2 and 4.3); spring peepers were associated with landscapes that were comprised of increased wetland land class at a 1000 m scale (Figures 4.2 and 4.4); and wood frogs were associated with landscapes that contained greater amounts of forest and wetlands at a scale of 200 m and less urban land class at a scale of 100 m (Figure 4.2 and 4.5); green fi'ogs were associated with landscapes that contained greater amounts of forest and wetlands at a scale of 200 m (Fig. 4.2). In the biplot, it is more appropriate to represent categorical variables such as land 260 Table 4.30. Summary of Monte Carlo permutation tests for landscape data showing significance of each axis in the constrained ordination (o. = 0.05). Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Axes Df Variance F # Permutations Pr(>F) RDA1 1 0.104 4.95 200 < 0.01 RDA2 1 0.020 0.94 100 0.80 RDA3 1 0.01 l 0.52 100 0.94 RDA4 1 0.008 0.38 100 0.90 RDAS 1 0.002 0.08 100 1.00 Residual l 2 0.252 261 Table 4.3]. Summary of Monte Carlo permutation tests for landscape scale data showing significance of variables in explanatory data set (a = 0.05). Forest200 represented by the total area of forest (m2) in the 200 m AD; urban100 represented the total area of urban (m2) in the 100 m AD; wetland1000 represented the total area of wetland (m2) in the 1000 m AD; ownership represented the land ownership where the survey site was located (SGWA vs. private); wetland200 represented the total area of wetland (m2) in the 200 m AD. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Variable Df Variance F # Permutations Pr(>F) Forest200 1 0.042 2.02 100 < 0.01 Urban100 1 0.034 1 .60 100 0.01 Wetland 1 000 1 0.041 1.93 100 0.04 Ownership 1 0.013 0.62 100 0.41 Wetland200 1 0.014 0.68 100 0.44 Residual 12 0.252 262 0.8 J wetland1000 0.6 / urban100 AMLA N - 2’ ° \ 0 HYVE THSA (I forest200 \ O - —+ --------------------- _ -------------------------------------------- BUAM 0 RACL wetlandn THSI N_ PLCI . OI RAPI V c? ‘RASY ownershipPrivate l i I -0.5 0.0 0.5 RDA1 Fig. 4.2. Redundancy Analysis ordination diagram (biplot). Species are represented by codes (see Table 4.4), the proximity of species in ordination space indicates occurrence in similar environmental conditions. Environmental variables are represented by vectors, which point toward rate of maximum change and extend in both directions. The length of the vector indicates its importance to the constrained ordination (ter Braak 1986). Perpendiculars drawn from species to vectors give the approximate ranking of that species response to the environmental variable and indicate the species optimum on that variable (ter Braak 1986). A smaller angle between the vector and the ordination axis indicates a greater relationship of the variable to the derived constrained ordination gradient (Grand and Mello 2004). Forest200 represented by the total area of forest (m2) ata200mscale;mban100representedthetota1areaofm'ban(m2)ata100mscale; wetlarrleOO represented the total area of wetland (m2) at a 1000 m scale; ownership represented the land ownership where the survey site was located (SGWA vs. private); wetland200 represented the total area of wetland (m2) at a 200 m scale. 263 15 1D RDA2 05 OD 05 -LO -1.0 —0.5 0.0 0.5 1.0 1.5 RDA1 Fig. 4.3. Plot of eastern American toad abundance in a Generalized Additive Model (GAM) surface for urban land class (m2) at a scale of 100 m. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 264 l0. _ l o, _ / to, _ // O N < o n: / Q o / l0 Cé ‘ @539 o- _ ‘7 l I r I I -1.0 -O.5 0.0 0.5 1.0 1.5 RDA1 Fig. 4.4. Plot of spring peeper abundance in a Generalized Additive Model (GAM) surface for wetland land class (m2) at a scale of 1000 m. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 265 1.5 1.0 RDA2 0.0 -1.0 -1.0 -0.5 0.0 0.5 1.0 1.5 RDA1 Fig. 4.5. Plot of wood frog abundance in a Generalized Additive Model (GAM) surface for forest land class (m2) at a scale of 200m. Data collected on SGWA and private lands in the southern Lower Peninsula of Michigan in summer 2005 and 2006. Increased size of circles indicates increase in abundance. 266 ownership type (SGWA and private) as points in the data space because they do not have a gradient of change. Classes containing sites with high values for a particular species will tend to lie in close proximity to that species in the data space. For example, eastern American toads were associated with patches found on private lands and spring peepers were associated with patches found on SGWA (Figure 4.2). The variance explained by the fill model, which consisted of four sets of environmental factors combined including urban land class at 100m, land classes at 200 m, and wetland land class at 1000 m, and land ownership was decomposed without including land ownership. Land ownership was represented as a categorical variable and was assessed as a site specific variable, as opposed to across the landscape, so I chose to exclude it for the variance decomposition. Land classes at a 200 m scale (forest and wetland) accounted for more variance (12.0%) than wetland land class at a 100 m scale (5.5%), and urban land class at a 100 m scale accounted for considerably less (3.9%) (Figure 4.6). DISCUSSION Results indicated that amphibian species richness, herpetofaunal species richness, herpetofaunal species diversity, and herpetofaunal community assemblages exhibited significant relationships with landscape attributes at differing spatial scales, particularly with land cover classes, regardless of analyses (univariate and multivariate analyses). Species richness and diversity were related to a combination of factors that depended on the spatial scale studied. At a 100 m scale, forest cover was the most important variable for amphibian and herpetofaunal richness, and species diversity. At a 200 m scale, open 267 urban100 wetland1000 3.9 A 5.5 12 scale200m Fig. 4.6. Percent of total variance in the herpetofaunal community data set explained by urban land class within 100m of survey site, wetland land class within 1000 m of the survey site, and scale200 (comprised of forest and wetland land classes within 200 m of survey sites), as well as variance explained by the combination of factors. Data collected in the southern Lower Peninsula of Michigan in summer 2005 and 2006 based on captures by drift fence arrays coupled with pitfall traps, funnel traps, and coverboards and area-time constrained surveys. 268 water was associated with richness and diversity, however, forest cover also exhibited a significant relationship with amphibian richness and wetland exhibited a significant relationship with herpetofaunal species richness and diversity. At a 1000 m scale, amphibian species richness was associated with agriculture and open water; herpetofaunal species richness was associated with forest cover, open water, and total road length; and herpetofaunal species diversity was associated with agriculture. However, when interpreting individual species requirements and factors that can influence community composition, a combination of landscape attributes at differing spatial scales (urban at a 100 m scale, forest at a 200 m scale, and wetland at a 1000 m scale), were the most important variables. Land ownership did not play a significant role in my findings, which suggests that at least in my study areas herpetofauna benefit from a mosaic of land use classes and that both land ownerships contain these desired land use classes. I expected to find a positive association between forest cover and species richness and species diversity. Amphibians breed in wetlands and emigrate to surrounding terrestrial habitats to forage and overwinter during the non-breeding season (Richter et al 2001). Forests provide essential habitat for these amphibians that spend all or a portion of their non-breeding seasons in trees, shrubs, or heavy leaf litter (Knutson et al. 1999). The importance of forest cover in structuring amphibian richness and abundance has been widely documented (e.g., Bonin et al. 1997, Hecnar I997, Hecnar and M’Closkey 1998). Reptiles differ from amphibians in that they emigrate to terrestrial areas to nest or overwinter, but they tend to live and forage in aquatic habitats (Semlitsch et al. 1988). Houlahan and Findlay (2003) found higher herpetofaunal species richness with high 269 forest cover within 2 km of wetlands. Maintaining connectivity between wetlands and terrestrial habitat is essential for herpetofauna species that use multiple, distinct habitats during their life cycle. Guerry and Hunter (2002) found species richness increased when the amount of upland forest cover adjacent to wetlands increased. Forests may be important to herpetofaunal communities because they provide relatively undisturbed habitat in the landscape, as compared to land uses like agriculture and urban development that are frequently modified or disturbed (Knutson et al. 1999). Forests moderate temperature and evaporation rates of adjacent aquatic habitats, influence pH levels in soil, and contribute to increased leaf litter and coarse woody debris (W aldwick 1997). Rubbo and Kiesecker (2005) found that anurans associated with forest cover when it was relatively common in the landscape (in Wisconsin) and when it was rare (in Iowa). I found a consistent positive relationship between amphibian species richness, herpetofaunal species richness, and herpetofaunal species diversity and forest cover. At a 100 m scale, it was the most important factor in determining richness and diversity. It was important to amphibian species richness at a 200 m scale and herpetofaunal species richness at a 1000 m scale. I expected to find a negative association between open water and species richness and species diversity. Open water had a negative effect on amphibian species richness, herpetofaunal species diversity, and herpetofaunal species diversity at a 200 m scale, as well as to amphibian species richness and herpetofaunal species diversity at a 1000 m scale. Open water is indicative of permanent water, suggesting that the hydroperiod (the amount of time it constantly holds water) is long and does not result in drying of the 270 water body. Fish predation most likely plays a valuable role in structuring amphibian distribution and amphibian community composition (Heyer et al. 1975). Previous studies have also found a negative relationship between open water bodies and species richness and diversity. Predatory fish occur in permanent water bodies, and thus there is a higher risk of predation by fish on amphibians in permanent bodies of water (Hecnar 1997). Previous studies have also found a negative relationship between open water bodies and species richness and diversity. Hecnar (1997) observed significant decreases (P < 0.01) in amphibian species richness at ponds that had predatory fish versus ponds that either did not have any fish or did not have any predatory fish. Hecnar and M’Closkey (1998) found species richness to be negatively correlated with water depth (indicating pond permanence) and fish predators. Open water is also negatively associated with amphibian larvae. Larval amphibians are vulnerable to several predators including vertebrate and invertebrate predators (Alford 1999). Ponds with a hydroperiod greater than 2 years are considered detrimental to amphibian species because they have a wide array of predators including invertebrates and fish (Semlitsch 2002). Certain species have adapted to more permanent waters and they can coexist with fish because tadpoles possess antipredator behavior and skin toxins (Semlitsch 2002). Species in my study area that have evolved antipredator behavior include: green frog and bullfrog (Semlitsch 2002). Studies have also shown that adult fi'ogs exhibit avoidance behavior to waters with predatory fish (e. g., Kats and Sih 1992, Hopey and Petranka 1994). Larval amphibians that have evolved a range of antipredator defense mechanisms have done so with native species that coexisted in ponds. The widespread introduction of 271 predatory fish and bullfrogs has exposed native amphibians to an entirely new array of predators with which they most likely had no prior interactions. For example, the yellow- legged frog (Rana muscosa) in the Sierra Mountains of California and Nevada were negatively affected by exposure to non-native predators. Yellow-legged frogs were exposed to non-native trout that had been stocked in ponds since 1800’s. By 1910, populations had been decimated by trout predation (Collins and Storfer 2003). In addition to site-specific population declines, the effects of introduced predatory fish can reduce recolonization rates of amphibians and alter metapopulation structure. I expected to find a positive association between wetlands and amphibian species richness, herpetofaunal species richness, and herpetofaunal species diversity. Wetlands have been positively associated with amphibian species richness (Knutson et al. 1999). I observed a positive relationship between wetlands and herpetofaunal richness and diversity at a 200 m scale. Amphibians use wetlands as breeding habitats (Richter et al. 2001) and for larval development, and some reptiles ofien live and forage in wetlands during the majority of the year (Semlitsch et al. 1998). Herpetofauna are influenced by wetland hydroperiod, and it is necessary to maintain wetlands with diverse hydroperiods (Pechmann et al. 1989). The positive relationship between wetlands and species richness and diversity reflects the requirement for this habitat type during certain phases of their life cycle, but also demonstrates the importance of maintaining connectivity among various wetland habitats to support a metapopulation structure (Semlitsch 2002). I expected to find a negative relationship between agriculture and amphibian and herpetofaunal species richness, and herpetofaunal species diversity. Amphibian diversity has been shown to decrease in association with intensive agricultural landscapes (Bonin 272 et al. 1997). I observed a negative association between agriculture and amphibian species richness and herpetofaunal species diversity at a 1000 m scale. Farming practices modify the landscape resulting in the loss of forest habitat, the draining, filling, and degradation of wetlands, the conversion of natural habitats to managed monocultures, and soil compaction (Bonin et al. 1997). In addition, the use of herbicides and pesticides in support of agricultural practices can potentially affect herpetofauna by degrading habitats and reducing plant and invertebrate diversity (Sotherton et al. 1988). Runoff from agricultural lands has the potential to impact aquatic habitats by modified nutrient loadings, sediment accretion, increased pollutants, and altered water temperatures (Saunders et al. 2002). Aquatic organisms’ mortality rates, reproductive success, and behavior and growth can be negatively affected by these alterations to aquatic systems (Abramovitz 1996). Pesticides can also negatively impact herpetofaunal species through direct toxicity resulting in sublethal effects on behavior (Bridges 1997) and development (Bridges 2000, Metts et al. 2005) and negative impacts can be intensified by interactions between sublethal effects and environmental factors (Metts et al. 2005). Fewer species tend to be found in urban areas (Rubbo and Kiesecker 2005). Urbanization negatively affects herpetofauna through changes in land use including the loss of natural habitats and increase in development, fragmentation of previously continuous populations, and the increased exposure to pollutants and contaminants (Genet 2004). Knutson et al. (1999) found a negative association between urban lands and species richness in Iowa and Wisconsin. However, the total area of urban land class was not a significant factor in characterizing species richness and diversity in my 3 spatial scale analyses. I did however observe its influence on specific species in my 273 constrained ordination. The majority of species had a negative association with urban at a 100 m scale, however, eastern American toad had positive association with urban at a 100 m scale. Eastern American toads are commonly found in fragmented and anthropogenically modified landscapes (Kolozsvary and Swihart 1999). Guerry and Hunter (2002) showed a negative association between eastern American toads and forest cover; they prefer warmer, shallow waters for breeding, which may occur more often in human-modified landscapes (Houlahan and Findlay 2003). Additionally, they are a habitat generalist (Hecnar and M’Closkey 1998) which most likely is why they are not affected by changes in the landscape due to urban development (Rubbo and Kiesecker 2005) Although it is clear that land use affects species richness and diversity, my results suggest the importance of species specific conservation strategies. When investigating factors that structure herpetofaunal community composition, individual requirements must be taken into consideration. Although the best model for the herpetofaunal community data set only explained 36.4% of the variation, I conclude that when managing for particular species these factors need to be considered at different spatial scales. Land cover classes have a significant impact on amphibian species richness, herpetofaunal species richness, herpetofaunal species diversity, and herpetofaunal community composition. Herpetofauna have different life history requirements and these requirements must be taken into consideration when managing for specific herpetofaunal species. 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