BIOSYNFHESIS 0F UBP-APEOSE AND APQIN Thesis for the Degree of Ph. D. MICHfiGAN STATE UNNERSHY RONALD ROSS WATSOfl 1971 This is to certify that the thesis entitled BIOSYNTHESIS OF UDP-APIOSE AND APIIN presented by Ronald Ross Wats on has been accepted towards fulfillment of the requirements for gal/(W Major professor Dateww 0-7639 ABSTRACT BIOSYNTHESIS OF UDP-APIOSE AND APIIN BY Ronald Ross Watson A method was developed for synthesizing the product of the reaction catalyzed by UDPGA cyclase. The reaction product was syn- thesized from the substrate of the enzyme, UDP-glucuronic acid, using purified UDPGA cyclase isolated from Lemna minor. Catalytic quantities of NAD+ were required for the synthesis of the reaction product. The reaction product was extensively characterized. It migrated on paper in four different solvents with an RF of uridine 5'-(d-D-xy10pyranosyl pyrophosphate), UDP-xylose, and had the same mobility as UDP-xylose when subjected to paper electrophoresis at pH 5.8. When [BHJUDP-[U-luc]glucuronic acid was used as the sub- strate, the 3H:1uC ratio in the reaction product was that expected if D-apiose remained attached to the uridine. The reaction pro- duct yielded [3H]urid1ne 5'-diphosphate ([3HJUDP) and D-[U-luCJ- apiose when hydrolyzed at pH 2 and 1000 for 15 minutes. When boiled at pH 8.0 for 5 minutes, it phosphorylated intramolecularly, yielding [3H]uridine 5'-monophosphate ([3H]UMP) and a-D—[U-luCJapio- D-furanosyl cyclic 1:2-phosphate. The reaction product served as the [U—luc]apiosy1 donor in the enzymatic synthesis of apiin from 7-(4',3,7-trihydroxyf1avonyl)O-B-D-glucopyranoside. The other product of this reaction was identified as [BHJUDP. These results established that the reaction product is uridine 5'-(a-D-apio—D-furanosy1 pyrophosphatel‘UDP—apiose. Through the O Ronald Ross Watson use of purified UDPGA cyclase UDP-apiose could be prepared in approximately 50% yield with a radiochemical purity of at least 60%. Stability studies showed that UDP-apiose was hydrolyzed to UMP and a-D-apio-D-furanosyl cyclic-1:2-P by exceedingly mild alkaline conditions. In a solution which contained 0.1 nmoles of UDP-[U-lucjapiose approximately one-third of the UDP-[U-140]apiose was hydrolyzed in 2 hours at pH 8.0 and 25°. Stability studies showed that UDP-apiose was hydrolyzed by exceedingly mild acid conditions (pH 4 and 25°). UDP-Apiose was stored for months with- out degradation at pH 5-6 at .20° in a solution 50$ ethanol by volume. UDP-xylose was not degraded by mild acid or alkaline conditions. The purified duckweed UDPGA cyclase contained UDPGA decarboxy- . lase which formed [3H]UDP-[U-1uc]xylose from [BHjunP-[U-luCngu- curonic acid and NAD+. D-Apiose was shown to be transglycosylated from UDP-apiose in a reaction catalyzed by apiin synthase. This enzyme catalyzed the transglycosylation of D-apiose from UDP-apiose forming apiin. Apiin synthase [UDP-apiose: 7-(u',5,7,-trihydroxyflavonyl) O-B-D- glucopyranoside, D-apiose transferase] was isolated from parsley and purified #5 fold. During purification it was separated from the parsley UDPGA cyclase. The substrates of the reaction, UDP- apiose and 7-(4',5,7-trihydroxyf1avony1) B-glucopyranoside were iden— tified. Apiin and UDP were identified as the products of the reac- tion. The pH optimum for apiin synthase is 7.6-8.4. The rate of formation of apiin increased linearly with increasing amounts of apiin synthase or increasing incubation. The Km for 7-(4',5,7- trihydroxyflavonyl) O-B-D-glucopyranoside is 7.0 x 10"5 M. Ronald Ross Watson The Km for UDP—apiose is 0.6 x 10‘5 M. Apiin synthase occurs primarily in the leaves. None of 12 compounds tested which con- tained metal ions increased apiin synthase activity. Five com- pounds which chelate various metal ions were incubated with apiin synthase and none inhibited it. Sulfhydryl reagents inhibited apiin synthase when incubated with it at 1 mM final concentrations. A11 (100%) of the apiin synthase activity was lost when p-chloro- mercuribenzoate, 75% with iodoacetamide and less with oxidized glutathione and N-ethylmaleimide. Uridine, UMP, UDP, UTP, UDP- galactose, UDP-glucuronic acid and UDP-xylose inhibited apiin syn- thase to some extent, but UMP and UDP inhibited it most at the '6 and l x 10'5 M). Apiin synthase lower concentrations (1 x 10 was also isolated from Digitalis purpurea (foxglove) as shown by the formation of a compound with the Rf of apiin from UDP-apiose and 7-(4',5,7-trihydroxyf1avonyl) O-B—D-glucopyranoside. Enzyme isolated from foxglove was necessary for the formation of the com- pound with the Rf of apiin. A method for isolating and purifying UDPGA cyclase from Petroselinin crispum (parsley) is described. It was purified 93 fold from parsley leaves. The pH optimum was 8.0-8.3 and the Km was 0.33 x 10'5 M for UDP-glucuronic acid. Exogenous NAD+ was re- quired to synthesis any UDP—apiose. Optimum synthesis was obtained with 1-2 x 10"3 M NAD+. UDPGA decarboxylase activity was found with purified UDPGA cyclase. The pH for optimum activity of parsley UDPGA decarboxylase activity was 8.0-8.2. UDP—xylose in- hibits UDPGA decarboxylase more than UDPGA cyclase and at lower '6 M). Exogenous NAD+ was not required to concentrations (1 x 10 synthesize 65$ of the amount of UDP-xylose formed with the optimum amount of NAD+, BIOSYNTHESIS OF UDP-APIOSE AND APIIN BY Ronald Ross Watson A THESIS Submitted to Michigan State University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Department of Biochemistry 1971 ,/ ’73". ‘2’} " J J" VITA Ronald Ross Watson was born in Texas in December of 1942. He was raised and educated in Moscow, Idaho. He graduated from Moscow High School in 1961. That same year he began his Sophomore year at the University of ldaho which was in- terrupted to preform service for the Church of Jesus Christ of Latter-day Saints in Chile. After two and one-half years in Chile he returned obtaining his B.S. in Chemistry from Brigham Young University on May 27, 1966. That significant day in May marked his marriage to Anita Ann Hebert and the start of their journey to the East for further study. After four and one-half years at Michigan State University they are continuing their trek eastward to Harvard University where Ronald will participate with Drs. G. Edsall and A. B. MacDonald in research. 11 ' . . . . . There is in science quite a gap between belief and certainty. But would one ever have the patience to wait and establish the certainty if the inner conviction was not already there [Jaques Monod (75)] ”Truth is the knowledge of things as they are, and as they were, and as they are to come.‘ [Joseph Smith (74)] 111 ACKNOWLEDGMENTS I wish to thank Dr. Paul K. Kindel for his example, advice and counsel during my research and graduate training. I also wish to thank him for his invaluable contribution towards my development as a biochemist. I appreciate the valuable advice, assistance and time of my thesis committee members, Drs. S. H. Wittwer, N. E. Tolbert, R. A. Ronzio and F. M. Rottman. My special thanks to Bernard Bruinsma for the learning opportunity his 1970 summer research project became for both of us. I also appreciate the technical assistance of Mrs. Beth Laine. The love, encouragement and support of my parents Drs. R. D. and E. K. Watson throughout my life, especially during the past few years is greatfully acknowledged. Without their encouragement and example I would not have set and met the goals such as this thesis represents. Their love of learning and improvement has always been an inspiration. The faith and support by my wife's mother, Hardis Stott, from afar, was especially valuable and appreciated. Finally, my most sincere thanks and love to my wife Anita for her continued support. My thanks for her understanding as she did without some of the material benefits of a working husband as well as being along way from home and family. I appreciate her wisdom in ordering the important phases of our family life, her love and her encouragement. The financial assistance of the National Science Foundation and the National Aeronautics and Space Administration is appreciated. iv TABLE OF CONTENTS VITA O O O O O C O O O O O O O O O O O O O O O O O O 0 ACKNOWLEDGMENTS. . . . . . . . . . . . . . . . . . . . LIST OF TABLES . . . . . . . . . . . . . . . . . . . . LIST OF FIGURES. . . . . . . . . . . . . . . . . . . . ABBREVIATIONS. . . . . . . . . . . . . . . . . . . . . PART 1. CHARACTERIZATION AND BIOSYNTHESIS OF D-APIOSE AND OF COMPOUNDS CONTAINING D-APIOSE. . . . Occurrence of D-Apiose in Nature . . . Characterization of Compounds Containing D—Apiose. . . . . . In vivo Biosynthesis of D-Apiose . . . PART 2. BIOSYNTHESIS AND CHARACTERIZATION OF UDP-APIOSE O O O O O C O O O O C O O O O O 0 INTRODUCTION 0 O C O O O O O O O O O O O O 0 MATERIALS AND METHODS . . . . . . . . . . . Materials. . . . . . . . . . . . . . . General Methods. . . . . . . . . . . . Paper Chromatography . . . . . . . Preparation and Assay of UDPGA Cyclase and Apiin Synthase . . Preparation of [ 3H]UDP—[U-1&C]- glucuronic Acid. . . . . . . . . . RESULTS 0 O O O O C O C O O O I O O O O O 0 Identification of the Product of the Reaction Catalyzed by UDPGA Cyclase. DISCUSSION 0 O O O O O O O O O O O O O O O O Page ii iv ix xi xiii OUNH 26 49 Page PART 3. PURIFICATION AND CHARACTERIZATION OF APIIN SYNTHASE FROM 2. crispum. . . . . . . . . . . . 66 INTRODUCTION 0 O O O O O O O O O O O O O O O O O 67 MATERIALS AND METHODS . . . . . . . . . . . . . 68 materials 0 O O O C O O O O O 0 O O O O O 68 General Methods . . . . . . . . 69 Standard Assay for Apiin Synthase . . . . 70 Absorbance and Solubility of '7GA'. . . . 75 RESULTS 0 O O O O O O O O O O O O O O O O O O O 76 IDENTIFICATION OF ONE OF THE REACTION PRODUCTS FORMED Bx APIIN SINTHASE . . . .76 In vitro Enzymatic Formation of Apiin (Compound IV). . . . .76 Identification of Compound IV as Apiin, .‘77 DISTRIBUTION OF APIIN SYNTHASE IN THE LEAVES, STEMS AND ROOTS OF PARSLEY. . . .82 PURIFICATION OF APIIN SYNTHASE. . . . . . . .83 EXtraction-o O O O O O O O O O O O O O O O 83 Ammonium Sulfate. . . . . . . . . . . . .84 Sephadex G-100. . . . . . . . . . . . . .84 DEAE-Sephad-ex O O O O O O O O O O O O O O 8“ PROPERTIES OF APIIN SYNTHASE. ... . . . . . .91 Linearity of the Apiin Synthase Reaction. 91 Factors Affecting the Stability of Apiin Synthase. . . . . . . . . .91 pH Optimum of Apiin Synthase. . . . . . .98 Affinity of Apiin Synthase for UDP- apiose and '7GA'. . . . . . . . .98 Effect of Various Ions on the Activity of Apiin Synthase . . . . . . . .98 Effect of Sulfhydryl Reagents on the Activity of Apiin Synthase. . . . .105 Inhibition of Apiin Synthase by Five ' Uracil Compounds. . . . .105 Fractionation of Apiin Synthase with Ammonium Sulfate. . . . . . . . . . . .106 DISCUSSION. 0 I O O O O O O O O O O O O O O O O 1'10 PART 4. PURIFICATION AND CHARACTERIZATION OF UDPGA CYCLASE FROM 3. crispug . . . . . . . . . . . .115 INTRODUCTION. . . . . . . . . , , , , , , , , .116 vi Page MATERIALS AND METHODS. . . . . . . . . . . . .117 materials 0 O O O O O O O O O O O O O .117 General Methods. . . . . . . . . . . . .118 Definition of Units. . . . . . . . .119 Standard Assays I and II for Parsley UDPGA Cyclase. . . . . . . . . .119 Standard Assays I and II for Duckweed UDPGA Cyclase. . . . . . . .121 Standard Assay for Parsley UDPGA Decarboxylase. . . . . .121 Standard Assay for Duckweed UDPGA Decarboxylase. . . .122 Identification of the Products Formed by Parsley UDPGA Cyclase and Parsley UDPGA Decarboxylase. . . . . . . . . .122 RESULTS 0 O O O O O O O O O O O O O O O O O . O O 123 DISTRIBUTION OF UDPGA OIOLASE IN THE LEAVES, STEMS AND ROOTS 0F PARSLEY . . . . . . .123 PURIFICATION OF PARSLEY UDPGA CYCLASE. . . .125 EXtraCtion O O C O O O O O O O O O O O .125 Ammonium Sulfate . . . . . . . . . . . .125 Sephadex 6-100 . . . . . . . . . . . . .125 DEAE-Sephadexo o o o o o o o o o o o o 0125 PROPERTIES OF PARSLE! UDPGA CYCLASE. . . . .126 Linearity of the Parsley UDPGA Cyclase Reaction . . . . .126 Factors Affecting the Stability of Parsley UDPGA Cyclase. . . . .132 pH Optimum of Parsley UDPGA Cyclase. . .133 Affinity of Parsley UDPGA Cyclase for UDP-glucuronic acid. . . .133 Effect of Various Ions on the Activity of Parsley UDPGA Cyclase . . . . .133 Effect of Sulfhydryl Reagents on the Activity of Parsley UDPGA Cyclase. . .133 Determination of Optimum NAD+ Con- centration for the Formation of UDP—apiose . . . .138 Inhibition of Parsley UDPGA Cyclase and Parsley UDPGA Decarboxylase by UDP-xylose . . . . .138 The Energy of Activation of Parsley UDPGA Cyclase. . . .138 Fractionation of Parsley UDPGA Cyclase and Parsley UDPGA Decarboxylase with Ammonium Sulfate . . . . . . . . . . .143 vii Page PROPERTIES OF PARSLEY UDPGA DECARBOXYLASE. . . .145 pH Optimum of Parsley UDPGA Decarboxylase. 11.5 Determination of Optimum NAD Concentra- tion for the Formation of UDP-xylose . .145 PROPERTIES OF DUCKWEED UDPGA CYCLASE AND DUCKHEED UDPGA DECARBOXYLASE . . . . . . .150 Factors Affecting the Stability of Duckweed UDPGA Cyclase . . . .150 Effect of Various Ions on the Activity of Duckweed UDPGA Cyclase. . . . . .150 Effect of Sulfhydryl Reagents on the Activity of Duckweed UDPGA Cyclase . . .153 The Energy of Activation of Duckweed UDPGA cyclase. o o O O O 153 Inhibition of Duckweed UDPGA Cyclase and Duckweed UDPGA Decarboxylase by Five Uracil Compounds. . . . . . . . . .153 DISCUSSION 0 0 O O O 0 O O O O O 0 O O O O O 0 O 157 viii PART 1. 1. PART 2. 1. PART 3. 1. LIST OF TABLES Small molecular weight compounds containing D-apioseo o o o o e o e o o o o e o o o o e o The ratio of 3H:1“c in the product from the rgaction caigl zed by UDPGA cyclase with [H]UDP—[U— Cfiglucuronic acid as the sub- strate. . . . . . . . . . . . . . . Products obtained on acid hydrolysis of doub y labeled reaction product and their 1C ratios 0 O 0 O O O O O O O O O O O O 0 Products obtained on alkaline hydrolysis 8f ggubly labeled reaction and their H 6 ratios 0 O O O O O O O O O O O O O O 0 Products obtained on incubation of doubly labeled reaction product and “7GA' with apiin synthase and their 3H:14C ratios. . . . The stability of UDP-[U—lnc]apiose at -200 and at pH 5.5.. . . . . . . . . . . . . . . Hydrolysis of UDP-[U—luc]apiose at pH 6.0 and 25° with time . . . . . . . . . . . . . . Recri allization of a mixture of "apiin” dfii C] ]Compound IV and a mixture of 'api n" acetate and [ CJCompound 13V acetate. Distribution of apiin synthase in the leaves, stems and roots of parsley. . . . . . . . . . Purification of apiin synthase from parsley leaves. . . . . . . . . . . . . . . . . . . . Inhibition of apiin synthase by various uracil compounds. . . . . . . . . . . . . . . Fractionation of apiin synthase with ammonium sulfate 0 0 O O O 0 O O 0 O O O O O O O O O 0 ix Page 31 32 35 ‘ 37 1+7 48 81 83 86 107 107 PART 4. 1. Page Distribution of UDPGA cyclase in the leaves, stems and roots of parsley. . . . . . . . . . . . 124 Purification of UDPGA cyclase from parsley leaves. . . . . . . . . . . . . . . . . . . . . . 127 Inhibition of parsley UDPGA decarboxylase and parsley UDPGA cyclase by UDP-xylose . . . . . 143 Fractionation of parsley UDPGA decarboxylase and parsley UDPGA cyclase with ammonium sulfate . 144 Inhibition of duckweed UDPGA decarboxylase and duckweed UDPGA cyclase by five uracil compounds 0 O O O O O O O O O O O O O O I O O O O 1 56 PART 1. 1. PART 2. 1. 2. 3. PART 3. 1. LIST OF FIGURES Transglycosylation of D-apiose from UDP-apiose. The extent of hydrolysis of UDP-[U-luc]apiose after 90 minutes at 25° as a function of pH . . The rate of drolysis of UDP-{U-1 “CJapiose to a-D-f [U- “Cfiapio-D-furanosyl cyclic-1: 2- P and UMP at pH8 .0 and 1000 with time. . . . . . The rate OEW h drolysis of UDP— [U- 1ucjapiose to a-D-[ [U-4 Capio-D-furanosyl cyclic-l: 2- P and UMP at pH 8. 0 and 250 with time . . . . . . Two possible mechanisms for the acid hydro— lysis of glycosidic linkages between pyraHOSj-des 0 O O O O I O O O o O O 0 O O O O O Torsional isomerism in cyclohexane. . . . . . . Chromatography of some of the compounds pre- sent in the standard assay mixture on polyethylenimine impregnated paper with LiCl solutions. . . . . . . . . . . . . . . . . . . The elution pattern of UDPGA Cyclase and apiin synthase from Sephadex 6—100 . . . . . . Chromatography of apiin synthase and UDPGA cyclase on DEAE-Sephadex . . . . . . . . . . . Formation of apiin by apiin synthase as a function of time with low concentrations (2)-B-D- glucopyranoside. Besides apiin there is two and perhaps more fla- vonoid glycosides in parsley which contain D—apiose. 1Abbreviations are listed on page xiii. .coNHmopompmso no: mo: oasooaoo pseudo one .hsommepmaohno hogan an mpsosooaoo ono>sam one woman on» no sofipdoamenooa unmodomDSm one mamhaopemn pace an mane eouapopomnmnoss ozonhmouoonahsonnun u o:o>mamomH "ouchaaouoopahsonaum u esopmams sopoonsu aznuspa> maumaomonmfl ofimuonamn . masonic: .m can mnoaoo>muw .¢ mnoaooemuw azamd use Away hoamhmm monzmuzm,mdampawan Aev summaho .M. Ra .fiwumtfisflb m3 .mpmoombo caspmapomv.monm o .w .mmoHanm monoomsmp .maooona .2 .MHHHaoamzw mammomppoz .msoomo on . .maafinoa maaosus< .manaonom mHHHom Mascaaho asswaop .aosaxma wwl.a:moswwaflz MD .soaoSpsoosoa mesoSpqmmaasw .maoaooemuw .4 .aommano .m Honosoamad>nm. Honozoahna>nm_ Edamonom oso>mamomahxouehsad .m.nuhxospo=u.: dam»x0Aeh:aha -a.m..:-sxospoz-.m Hoanoomstno m medmownaoossno oso>mHthonohs nonpoauu.m..:..m naaoopzq < oeamoanaoo>mpo eno>mam saxonehsdaeum.m..: nanowao4 ssgaaaomdomaamoHomoosao. “cocoaanopmo ono>mamzw0Lehsanp mHo>Hm5Honoo no: monopmaxov um.m..mnhxospo=u.e :Hposmoa sandaomOppom oso>oam -axonessdtaua.m..e edemmno< enwo< oonoom usuam Aoaez .ofipmsopmam.v Amsmz Hedswpev s282391 oncomaw< omoflnapooo«uoa opoaaaohaao on» coo cosqooo .oaaon on com m poo>aom so“: 0: no coaoHo>oc no: momma one .oasuohoaaou osoo on» no cocoa donoox no coupons mos» com c: on UoHooo one: oaoausHoo on» mopsnaa om hon omN no soduonso use aopm< .Hs ma.o no: soapsaom oanaom sooo no oasno> Honda one .o.HH so 0.0H .o.e .o.m .e.a .o.o .o.m .o.s .e.m .o.~ me access as one: asoaaaaoe access use .mooz no mussoeo msahao> was ac: no moaoaa m.~ .oposamoga nowohchnao asadom mo moaaaaam.a .nommm mo moaoaa m.H dosaopsoo soans_:odpsaom houmsn o cocoa no: sumo oa .Aeae ooe.nv oaoaawmosa-ag-daa uo sacs: emo.o one lane oem.aav sooaaomosa-sguaap mo oHoas omo.o doodopsoo nods: oohoaoaa onoz o: no osoapsaom n: .:a no moduossm o no 0mm no mopsaas om houmo omodaomooanauumaa no oaohaoaoh: mo unopxo one .H .wam mwh:2_<< 00 «On— 40 e. , OO— aaznoaom asouv-do n iwaoaaa 41 .oaasoo esnpuonou on» an onomaondhn erepoeuee o: no: ones» co:ose eHonusoo on» sonn connoppo oped one .m:bap:~oe Honusoo on» non enono oennnoeoc mo deacon» and oenoaona no: .o.o ma no pun enono confinemec ooosu on Hooapneen .osonpzaom Honuaoo paeanneaxo on» wannsc eHaaee eanpuonow on» an eennsooo do: mnonaonunn ado na esnenepee oa .eaasoe eanpnoneu on» an usemena mumuauonao»o aheosonsnaauonaomo: tsunaua on» non douoennoo one: eeaaaoe HH< .mamuauonaozo HamosenznuouOHQo oaausuiniu on dopnensoo mo: sens: com: ooonaomuaaupgima: on» no psoo nea on» on enmhaonch: unoo non .m acnusaom nonuoaannsnom an oopssoo use poo use one: noeno o>npoooncon eponnaonaao on» use eessoom .mnson ma non o pse>Hom Spa: 0: no eeaoaenec mo: neaon one .o: no neaoa doses: :0 ueppoao one: use can an op oeumznoo one: escapadoe on» HHo cone .Aooussns om haopoaaxonaaev psoannoawo on» no noduonsu on» non o.m ma one o: no paex son» use omN no oeuonzosuonn no: oHaaem eanpnonou one .co>oaen mo: ego peed es» Hanna 0: no anex use eanp eponnaonnao on» no oe>oaon me: some use naaonusesoee wounopm one: encapsaom .ecaoooo om: no can .oNH .om .oo .om .nn .o non soon so eonspaoan one: nos» scan .omm no seasons N uenensosaona one: .Ha H.o no easaob Hogan e an eo no: nonea e29 .02 no noaen venue: so cannons one: use wan an on denounce one: econosaoe es» sens .do>osen an: ego peed on» Hanna 0: no ago: one eanu enonnaonano on» no eeeoaen mo: node use eanu osee on» we eepnoae one: ononpaaoe HH< .0: on unmaonn one: son» one eonssda oua no ow .om .ma .0 non onN no oeuonzosn one: .Hs ma.o no eesaoe Hanan e an «saw no eeaoas nn.n use .o.m ma .aonnao oossaaosa senses no sonoaanm.n .naae eo~.mn swonnwmesnuauunaa no monoa: na.o .nsae emn.nn oeonasmoenusgunaa no sense: ooo.e manansasoo sous .o: as asonosnom .. .oana can: own one e.m an as as: use numanuonnono nanoseaan -auonasmoen-=uua-e on suonaomosn-pg-nn= no unannonens no soon see .m .mnn 45 L 90 # O In 100 oaznouoiw asonav-aan 1N3 bill so MINUTES A'l' pH 8.0 AND 25° 46 of it under reduced pressure with little or no degradation. The degradation of UDP-[U-luCJapiose under these conditions yielded both D-[U-lucjapiose and a-D-[U-lncjapio-D-furanosyl cyclic-1:2-P about equally throughout the course of the experiment (Table VI). After 1 hour 1.2x of the UDP-[U-luCJ- apiose was degraded. After 5 hours 3.01 was degraded to a-D-[U-lucjapio-D-furanosyl cyclic—1:2-P and 3.21 was degraded to D-[U-lucjapiose. The data show that the degradation of UDP-[U-lnCJapiose to D-[U-1“c]apiose and to a-D-[U-luCJapio- anuranosyl cyclic-1:2-P is each linear with time at 25° and pH 6.0. Solvents A, B, C, D, and I effectively prevented the'” appearance of d-D-[U-lucjapio-D-furanosyl cyclic—1:2-P and D-[U-lucjapiose from UDP-[U-14C]apiose during chromatography at 4°. Solvents F and G permitted the degradation of some of the sugar nucleotide during chromatography at 40 to a-D-[U-lucjapio-D-furanosyl cyclic-1:2-P. 47 TABLE V: The stability of UDP-[U-luCJapiose at .20° and at pH 5.5* X‘UDP- U-lucjapiose % UDP- U-lucjapiose Total UDP- [U-1 C apiose 9"“ °33§3€3§%i§3o3'n' E331351§§1§3. D- degraded uranosyl cyclic- 1:2-P 0 -+0.00 -+0.00 -+0.00 10 +0.04 +0.23 +0.2? 14 -o.21 +0.34 +0.13 21 -0.47 '+O.34 -0.13 29 .0.11 -0.20 -o.31 41 +0.39 +0.13 +0.52 60 -0.23 +0.12 .0.11 *The storage mixture contained 1.97 nmoles of UDP—[U-luC apiose (147,400 dpm) in each ml of a mixture of equal volumes o 0.04 mM Tris-acetate. pH 5.5 and absolute ethanol. The mixture was stored at -200. At the time intervals indicated, 2-100 ul portions were removed, spotted on washed paper at 40 and chro— matographed in solvent B for 30 hours at the same temperature. The radioactivity migrating with an a of D-[U-19CJapiose and a-D—[U-luglapio-D-furanosyl cyclic-l: -P was measured and the average v as for the 2-100 ul portions was recorded. The values for these two compounds in the zero-time samples were set equal to zero. Some fluctuation in the values of these two compounds during the course of the experiment was expected as the amount of them in the zero-time samples was relatively high (1.8!) compared to the amount formed upon storage. 48 TABLE VI: Hydrolysis of UDP-[U-thJapiose at pH 6.0 and 25° with time'. Time UDP- U-luCJapiose a-D-[U-luc apio- D-[U-lucj- (minutes) rema ning D-furanosy cyclic- apiose m 1‘“ m m 0 100 0.0 0.0 30 99.5 0.1 0.4 60 97.9 0.5 0.7 90 ' 97.3 1.7 V 1.0 120 97.2 1.5 1.3 210 96.3 2.2 1.5 300 93.8 3.0 3.2 (26,600 dpm), 0.38 nmole of UDP C] ]xylose (28, 90 dpm) and 5 nmoles of sodium phosphate bu er, pH 6. 0, and 2. 5 nmole of EDTA in a final volume of 0.1 ml, were incubated at 25° for 0, 30, 60, 90, 120, 210, or 300 minutes and then were brought to 4°. All solutions were started at the same time and each was removed at the appropriate time and kept at 4° until the last one was removed. The solutions were spotted on washed paper at 4°. The paper was developed at 4° with solvent B for 30 hours, scanned, and the appropriate radioactive areas were cut out and counted in scintillation solut on B. Hydrolysis was measured by thi a pearance of a-D—[U-l C]apio-D-furanosyl cyclic— 1: Z-P or D-[ U- “C apiosg or both. Per cent hydrolysis is the per cent of[ the UDP-[ U- “C apiose used which was co verted to a-D~[U- “0] Japio-D-furanosy cyclic-1:2-P and D- U-1 Cjapiose as determined by radioactility measurements. A 1 samples were correc ed for the a-D- U-1 C ]apio-D-furanosyl cyclic-1:2-P and Dn[U-1 Ca apiose presen in the zero-time sam le senteda ve show that no hydrolysis of UDP- 0-140 curred in the zero-time sample during the course o experiment. *Solutions at 4°, each containin§0125 nmole of UDP- U-luc Cjapiose v-1 f Data pre- gapiose oc- the 49 DISCUSSION One of the richest sources of D-apiose is in the cell wall polysaccharides of duckweed. Some of these polysaccharides have recently been isolated and characterized (15-17). Hart and Kindel (17) found D-apiose glycosidically linked to polygalacturonic acid (apiogalacturonans). As the biosynthe- sis of polysaccharides appears to involve transglycosylation reactions from sugar nucleotides (68) similar reactions could be expected to occur in the biosynthesis of apiogalacturonans of duckweed. The search for a sugar nucleotide containing D-apiose produced several preliminary and inconclusive communications. Sandermann and Grisebach (69) isolated sugar nucleotides from lg. crispgm and obtained 7250 nmoles of ultraviolet absorbing material. These were hydrolyzed with acid liberating the sugars of the.sugar nucleotides. One of the sugars (0.15 nmole) migrated with the RF of D-apiose. These data, they said, showed the presence and existence of a sugar nucleotide containing Dnapiose. Sandermann, Tisue and Grisebach (38) later reported the isolation.of a.cell-free extract from duckweed which formed several radioactive compounds from UDP-[U-luCngucuronic acid. These compounds migrated with the RF of UDP-xylose. The cell-free extract was incubated with UDP-[U-lucjglucuronic acid (1,100,000 dpm) and NAD1'for 4 hours and 20 minutes at 25°. Then the UDP-pentoses (14,500 dpm) formed during incubation were isolated by paper chro- matography and electrophoresis. They were hydrolyzed 50 with acid and the liberated pentoses were isolated. One of these pentoses (260 dpm) migrated with the RF of Dbapiose. As reported by Grisebach and co-workers, the amount of UDP- apiose formed (38) or isolated (69) was quite small and the possibility that they were a contamination or an artifact can not be easily discounted. In both reports very limited data were used to show the existence of the new compound. Independently Gustine and Kindel (39) reported the=isola_ tion."ofa cell-free extract from duckweed which converted 22% of the substrate, UDP-[U-lucjglucuronic acid, into a D-apiose containing compound. No UDP—apiose was isolated under the conditions they carried out their experiments. As mentioned in the Results of Part 2 of this thesis, Kindel afterwards found that much less of this D-apiose containing compound (later identified as a-D-[U-lucjapio-D-furanosyl cyclic-1:2-P) was formed in incubation mixtures which were not boiled at pH 8 and which were chromatographed at 4°. Re postulated that a-D-[U-lucjapio-D-furanosyl cyclic-1:2-P was the degra- dation product of UDP-[U-lucjapiose rather than the primary enzymatic product of the reaction with UDP-[U-lucjglucuronic acid catalyzed by the extract from duckweed. Early work by Paladini and Leloir (62) supported this hypothesis. They studied the base catalyzed intramolecular phosphorylation of UDP-glucose and found that UDP-glucose would phosphorylate intramolecularly above pH 8. If UDP-apiose was formed by the extract and if it was more sensitive than UDP-glucose to lower pH then it might phosphorylate intramolecularly at pH 8. 51 I had previously made an observation that suggested that UDP-apiose was being formed by parsley UDPGA cyclase from UDP-glucuronic acid. I observed that parsley UDPGA cyclase was necessary to synthesize apiin through its formation of an unidentified D-apiose donor molecule. This reaction also required the presence of '7GA' and was catalyzed by parsley apiin synthase. The above observations suggested that UDP—apiose was formed from UDP-glucuronic acid by enzymes isolated from duckweed and parsley. This was unequivocally established by the isolation of all the sugar nucleotides formed from [3H]UDP-[U-140]glucurcnic acid by purified duckweed UDPGA cyclase and duckweed UDPGA decarboxylase and their subse— quent characterization. A very mild isolation and partial purification procedure was devised which separated the sugar nucleotides from the other substances present in the incu- bation mixture (NADT, UMP, a-D-[U-luCJapio-D-furanosyl cyclic-1:2-P and duckweed enzymes). The presence of base, sugar and phosphate in the reaction . products (sugar nucleotides) was demonstrated in the following five ways, which showed that they were sugar nucleotides. First, the reaction products were found to contain the 14 expected amounts of 3H and C based upon the amounts of 3H and 14 1("C in the substrate was lost as [MC]C02. These data C present in the substrate and assuming that 1/6 of the show that the assumption that the uridine portion remained attached to the sugar portion. Second, both of these sugar 52 nucleotides had the same RF as authentic UDP-xylose in a variety of paper chromatographic systems. Third, mild acid hydrolysis (pH 2) yielded [3HJUDP, a little [3h]0hp, D-[U-1u0]xylose and D-[U-luCJapiose. Paladini and Leloir (62) had observed that mild acid hydrolysis (pH 2) was a good indication of the presence of a sugar nucleotide. The glycosyl phosphate linkage of a sugar nucleotide is less stable than that of the corresponding glycosyl phosphate. For example, D-glucose can be quantitatively split from UDP-glucose by heating it at 1000 for 15 minutes in 0.01 N hydrochloric acid (62), whereas complete cleavage of D—glucopyranosyl l-phosphate to D-glucose and inorganic phosphate requires similar treatment in N acid (63). The A00 of hydrolysis of the D-glucopyranosyl l-phosphate bond of UDP-glucose has been calculated to be approximately -7600 calories at pH 7.4 (64), whereas that of D-gluco- pyranosyl l-phcsphate is -4800 calories at pH 8.5 (65). Fourth, the product of intramolecular phosphorylation of one of the two reaction products resulted in the formation of [3HJUMP and a-D—[U-lucjapio-D-furanosyl cyclic-1:2-P. The reaction product containing D-[U-lucjxylose like a similar pyranoid sugar nucleotide, UDP-glucose (62), did not phosphorylate intramolecularly at pH 8 and 100°. This reaction product was recovered and its 3H:luc ratio was unchanged. Fifth, apiin synthase was employed to further characterize one of the reaction product as [BHJUDP-[U-lucj- apiose by showing that it would function as a D-apiose donor 53 molecule in a glycosidic reaction. A reaction mixture was prepared with [3H]UDP-[U-1“c]xylose, [3HJUDP-[U-1“c]epiose, '70A' and apiin synthase. [BHJUDP-[U-luc]apiose did react to form [lucjapiin. This was shown by the formation of [BHJUDP and [1”C]apiin and by the disappearance of [BHJUDP- [U-luc]apiose. The experiment also shows that the products of the reaction catalyzed by apiin synthase are UDP and apiin. [BHJUDP-[U-lucjxylose did not react in the above incubation mixture. This was shown by the recovery of the added [3H]UDP-[U-1“c]xylose and its unchanged 3Hzmc ratio. A, reaction mixture was prepared with [3H]UDP-[U-luC]xylose [33]UMP, a-DnEU-luc]apio-D-furanosyl cyclic-1:2-P, '7GA' and apiin.synthase. After incubation the above radioactive com- pounds were recovered unohanged. Radioactive compounds were not observed with the RF values of the expected products of the above transglycosylation reaction i.e. [BH]UDP and [14C]- apiin. These results indicate that UDP-[U-luc]xylose did not react in the reaction catalyzed by apiin synthase. The above results which show that apiin and UDP are formed from '70A' and UDP-apiose by apiin synthase agree with those of various glycosylation reactions with sugar nucleotides (65,68). UDP has not been identified before as a product of transglyco- sylation reactions where the substrates were a nucleoside diphosphate sugar and a flavonoid or similar phenolic com- pound (68.54.55.57). The final proof of the proposed structure of UDP-apiose [uridine-5' (a-D-apio-D-furanosyl-pyrophosphate)] will require its chemical synthesis. The stability of UDP-xylose and UDP—apiose was investigated in both acidic and alkaline solutions. UDP—xylcse was stable under the conditions tested except at pH 2 and 100°. The hydro- lysis properties of both UDP-xylose and UDP-apiose at pH 2 and 1000 are those that are characteristic of sugar nucleotides (65). UDP-apiose was unstable under most conditions tested. Optimum conditions for storing UDP-apiose without degradation are -20°, pH 5 to 6 and in a solution which is 50$ ethanol by volume. The other organic solvents used to store UDP-apiose at .200 were 503 acetone by volume and solvent A. UDP-apiose stored at -200, in solvent A and at pH 5 to 6 was stable for months. At 25° and below pH 5 acid hydrolysis of UDP-apiose occurred. At 250 and at pH values above 6 alkaline hydrolysis (phos- phorylatesintramolecularly) occurred. Lowering the temperature retarded hydrolysis at these pH values. At pH 8.0, for example, alkaline hydrolysis at 1000 was nearly complete after 2 min- utes. At 250 it was 405 complete after 90 minutes and at 40 it was 5.51 complete after 90 minutes. At all 3 temperatures and pH 8 some hydrolysis occurred. The above reaction is an example of reactions which occur with some sugar nucleotides in the presence of alkali. The result is a nucleoside monophosphate and a cyclic 1:2-phosphate of the sugar. This type of reaction occurs if the hydroxyl group on carbon atom 2 of the sugar is located sufficiently close to the phosphorus atom on carbon atom l of the sugar residue to permit the formation of a 5-membered ring (67). 55 Khorana, Tener, wright and Moffatt (67) called this type of a reaction intramolecular phosphorylation and represented the general reaction as given below. 1’ fi ('3- 0—l|’—0-l"— on’ £13 in - on on H o “r“ :: ‘6 +R'OP-OH C- \ow \ ow Intramolecular phosphorylation has been found to occur in bopsgluouronic acid ianHuOH (50,66). Basic hydrolysis (intramolecular phosphorylation) at pH 8 of [BHJUDP-[U-lucjxylose and [3HJUDP-[U-lucjapiose revealed that only [BHJUDP-[U—lhcjxylose was stable at pH 8. [BHJUDP. [U-lucjapiose was'degraded to [3HJUMP and a-D-[U-lacjapio- D-furanosyl cyclic-l:2-P. Both UDP-apiose and UDP-xylose would be expected to form a cyclic sugar phosphate because of the stereochemistry at carbon atom l and 2 of the sugars. However, this was not expected under the mild conditions that resulted in the basic hydrolysis of UDP-apiose (4° and pH 8) since Leloir and Paladini (62) did not observe intramolecular phosphorylation with UDP-glucose except under more severe 56 conditions, i.e. higher pH and temperature. UDP-glucose, a compound with a pyranoid ring and with the same stereo- chemistry as UDP-xylose, is quite stable at pH 8. After 18 hours at 180 and pH 8, UDP-glucose is undegraded (62). How- ever, it did begin to cyclize at a more alkaline pH and 100°. The tendency of UDP-apiose to phosphorylate intramole- cularly at pH 8 has recently been mentioned by Sandermann and Grisebach (40). They suggested that the ready formation of d-D-apio-D—furanosyl cyclic-1:2-P could be explained by its great stability. This stability is due to the presence of two condensed 5-membered rings which would be in contrast to the cyclic 1:2-phosphate of anylose and of D-glucose. These latter compounds have a 5-membered ring condensed to a 6-membered ring. The facile degradation of 5-phospho-ribo- furanosyl-pyrophosphate was cited as an analogous reaction resulting in the formation of two condensed 5-membered rings. Besides the suggestion of Sandermann and Grisebach (40) another reason for the unusual sensitivity of UDP-apiose to basic conditions can be suggested. It would also explain the unusual sensitivity of UDP-apiose to acidic conditions which the suggestion of Sandermann and Grisebach (40) does not explain. (They did not report investigating the stability of UDP-apiose in acidic conditions nor its isolation and characterization.) My suggestion (which will be explained in.more detail later) is that a pyranose sugar of a sugar nucleotide requires more energy to change into the best con- formation for intramolecular phosphorylation of the sugar 57 nucleotide or acid hydrolysis of the glycosidic linkage than does a furanose sugar of a sugar nucleotide. The amount of energy necessary to convert the sugar into the ideal confor- mation for the greatest reactivity of the sugar nucleotide affects the sugar nucleotide's lability in acidic and basic solutions. My suggestion can be readily understood from the infor- mation supplied by studies on the hydrolysis of the glycosidic linkages of oligosaccharides. The glycosidic linkages of oligosaccharides are readily hydrolyzed by acids, but are relatively stable in alkaline conditions. Acid hydrolysis of oligosaccharides occurs, as with other glycosides, by fission of the bond between carbon atom l of the glycosyl residue and the glycosidic oxygen atom (91). The mechanism of the acid-catalyzed hydrolysis of pyranosides has been extensively investigated. Little information is available on the hydrolysis of furanosides by acid. Pazur and Gordon (92) and Aspinall and Telfer (93) reported that glycosidic linkages involving furanose residues were extremely acid-labile in polysaccharides. Shafizadeh (82) says that there are two possible mechanisms consistent with the observations stated above and other observations which would explain the acid- catalyzed hydrolysis of pyranosides. "They are shown in formulas [3] to [10] (Fig.l$). One mechanism involves rapid reversible protonation of the glycosidic oxygen atom to yield the protonated oligosaccharide [3] which undergoes a slow unimolecular decomposition to a stable monosaccharide 58 Fig.l+. Two possible mechanisms for the acid hydrolysis of glycosidic linkages between pyranoses (88). CH20H H30 /( /( H "—9 "H H . (H \9 on H C. - OH H ‘ OH H -- H+ROH no OR' so go - H R0 ' l I l " g H H 011 60 and a cyclic carbonium ion [4]. Nucleophilic addition of water to the electron-deficient carbon center yields a protonated reducing sugar [6], and subsequent loss of‘a proton yields the expected hydrolytic products [7]: A possible, but not widely accepted alternative mechanism, Shafizadeh (82) says,"would involve protonation of the ring oxygen atom of the glycosyl moiety to yield a protonated oligosaccharide [8] followed by the cleavage of the pyranose ring to give an acyclic carbonium ion [9]. Nucleophilic addition of water on the acyclic ion would yield an unstable intermediate [10], which would predictably eliminate a mono— saccharide residue to yield an aldehydo-monosaccharide. Rearrangement of the latter into the pyranose structure would yield the final hydrolytic product [7].I Indirect evi- dence from experiments on the rates of hydrolysis of D-xylose derivatives supports the first mechanism as being operative in the hydrolysis of these compounds (94). The relative rates of hydrolysis of pyranosides in terms of the first mechanism have been explained by conformational effects and intramolecular steric interactions (95). Pazur (88) says, ”the rate-determining step is the formation of the carbonium ion, which is considered to exist in a ”half-chair" conformation.” The most unstable confor- mation of cyclohexane, a compound which is very similar in conformation to the various pyranoses discussed, is the "half-chair" conformation (96). About 5.5 kcal/mole is required to change from the stable, "chair“ conformation to 61 Fig. 5. Torsional isomerism in cyclohexane (96). 62 63 the "twist" conformation. This means that at 250 there are 10,000 "chair'I conformations for each "twist" conformation, (96). About 0.5 kcal/mole is required to change from the "twist" conformation to the “boat" conformation (Fig.55). However, to change from “chair“ conformation to the "half- chair' conformation requires 11 kcal/mole (96). This is because formation of the "half-chair" conformation involves a small rotation about the carbon atoms 2 to 3 and carbon atom 3 to 4 bonds. The rate of acid hydrolysis is dependent primarily on the extent of the interaction of the equatorial substituents on carbon atom 2 relative to carbon atom 3 and on carbon atom 4 relative to carbon atom 5. These groups eclipse each other in reaching the transition state for the reaction--the "half-chair“ conformation.(88). In cyclopentane, a furanose, the change from "envelope" conformation to "half-chair" conformation and back again involves almost no change in potential energy (89). In sub- stituted cyclopentanes one form or the other may have greater stability sometimes by as much as 2 kcal/mole (89). Even so this difference is much smaller than that observed in cyclo- hexane when it changed from the "chair” to "half-chair“ conformation. Actually the shape of cyclopentane is not fixed. The individual carbon atoms move up and down at right angles to the average plane of the ring in such a manner as to cause the irregularity or puckering to move around the ring (89). The above observations explain the acid lability of UDP- apiose resulting in its' hydrolysis under mild conditions 64 (pH 4 and 25°). The comparative stability of UDP—glucuronic acid, UDP-xylose and UDP-glucose to mild acid hydrolysis is easily understood. Apparently in each case the amount of energy required to reach the rate limiting or critical reaction conformation or intermediate determines the reacti- vity of the sugar nucleotide. UDP-glucuronic acid, UDP-xylose and UDP—glucose, require a large amount of energy to change the conformation of the sugars from the stable, "chair” con- formation to the critical, unstable, reaction conformation. Some of the D-apiose of UDP-apiose either exists in the critical, reactive conformation (”half-chair“) or requires very little energy to bring D-apiose into this conformation. An examination of Framework Molecular models representing UDP-apiose and UDP-xylose reveals that UDP-apiose can readily phosphorylate intramolecularly. In sugar nucleotides free rotation about phosphorus to oxygen to phosphorus bonds is restricted by steric hinderance. Thus, the models reveal that UDP-xylose must change from the more stable ”chair” con- formation to the less stable ”half-chair" conformation (96,89) to bring the hydroxyl group on carbon atom 2 to its closest position to the a phosphorus atom of the sugar nucleotide so that intramolecular phosphorylation is more likely to occur. The hydroxyl group of carbon atom 2 of the stable, "half-chair" form of D-apiose in UDP-apiose is much closer to the a phos- phorus atom than it is in the stable, "chair" form of D-xylose in UDP-xylose. In fact the "half-chair“ conformation and the "envelope” conformation of furanoses change back and 65 forth and back again via intermediate asymmetric arrangements which involve no substantial change of potential energy (89). The change from one form of D-apiose to the other involves little movement of the hydroxyl group on carbon atom 2 away from the B phosphorus atom. These facts support my suggestion that the furanoid ring of D-apiose is important in causing instability at alkaline pH values as well as acidic pH values. PART 3 PURIFICATION AND CHARACTERIZATION OF APIIN SYNTHASE FROM 2. crispum 66 67 INTRODUCTION A wide variety of phenolic compounds exist in higher plants including the flavonoids and related compounds. Flavonoids normally occur in higher plants not as free phenolic compounds but rather in an amazing variety of glycosides containing mono- or oligosaccharides (53,68). Barber (54) first described the glycosylation of a flavonoid, quercetin (3',4',3,5,7-pentahydroxyf1avone), in which the glycosyl donor was UDP—glucose. The product of the reaction was 3-(3',4', 3,5,7-pentahydroxyflavonyl) O-B—D—glucopyranoside. The reaction was catalyzed by a cell-free extract from Phaseolus aureus (mung bean). Further incubation of the enzyme preparation in the pre- sence of TDP-L-rhamnose catalyzed the transfer of L—rhamnose to form 3—(3',4',3,5,7-pentahydroxyflavonyl) O-B-L-rhamnopyranosyl- (1+6)-B-D-glucopyranoside. Barber (55) later reported the gly- cosylation of quercetin by UDP-L-rhamnose to quercetrin, 3-(3', 4',3,5,7-pentahydroxyf1avonyl) O-B—L-rhamnopyranoside. This reaction was catalyzed by a cell-free extract from Leucaena glauca. Miles and Hagen (48) reported the formation of the 3-monoglucoside of kaempferol, quercetin and myricetin from UDP—glucose by a cell-free extract of Impatiens balsamina. Marsh (49) reported the formation of 3-(3',4',3,5,7-pentahydroxyflavonyl) O-B-D- glucopyranosyluronic acid from UDP-glucuronic acid and quercetin by an extract of Phaseolus vulgaris (French bean). In 1970 there were two preliminary reports on the enzymatic glycosylation of another flavonoid. Watson and Kindel (56) re- ported the purification of an enzyme from P. crispum which catalyzed the transfer of D-apiose (3-C-hydroxymethy1— aldehyd -D-g1ycero-tetrose) from UDP apiose to 68 7-(4'5,7-trihydroxyflavonyl) 0-8-D-glucopyranoside to form apiin (Fig. 1, Part 1). They gave the common name apiin synthase to this enzyme. Ortmann, Sandermann and Grisebach (57) also reported the isolation from 2. hortense of a cell- free extract forming the same compound. I report here the partial purification and characterization of apiin synthase. The substrates and products of the reac— tion catalyzed by apiin synthase are identified. Kindel1 had previously obtained evidence for the existence of this enzyme in cell-free extracts of P. crispum and established that one of the products of the reaction was apiin. UDP- apiose:7-(4'-5,7—trihydroxyf1avony1) B-O—D-glucopyranoside, 2 D-apiose transferase is the systematic name Watson and Kindel suggest for apiin synthase. MATERIALS AND METHODS Materials. -- NAD+ was obtained from Sigma Chemical Co. UDP—[U-luc]glucuronic acid was obtained from New England Nuclear Corp. Sephadex G-25, 0-100 and DEAR—Sephadex A50 were obtained from Pharmacia Fine Chemicals, Inc. and polyethylenimine was obtained from Dow Chemical Co. '7GA" was isolated from crystalline ”apiin" and recrystallized from 95% aqueous ethanol (8). Crystalline ”apiin" was isolated from parsley seeds by the method of Gupta and Seshadri (45). Although crystalline, it was a mixture, hence the quotation marks for both it and '7GA“ (8). 1Kindel, P. K., unpublished data. 2Watson, R. R. and Kindel, P. K., manuscript in preparation 69 UDPGA cyclase was isolated from L. minor (41). d-D-[U-luc]- l and UDP-[U-luC]apiose were Apio-D-furanosyl cyclic-1:2-P formed enzymatically from UDP—[U-luC]glucuronic acid (Part 2). D-Apiose was isolated from "apiin" (8). All other materials used were of the highest quality avail- able from commercial sources. The parsley used to obtain apiin synthase and UDPGA cyclase was 2. crispum, moss-curled variety. They were mature (8-12 months of age) plants grown in a greehnouse from seeds obtained from Ferry—Morse Seed Co., Fulton, Ky. Bovine serum albumin was purchased from Research Products Division, Miles Laboratories, Inc. UMP, UDP, UTP, UDP-glucuronic acid, UDP-galactose and UDP-xylose were from Sigma Chemical Co. Diaflo cells and UM-lo Diaflo membranes were purchased from the Amicon Corporation. General Methods. -- Paper chromatography was by the descending technique and was carried out with Whatman No. 3MM paper. The paper used with solvents A and E was treated with 2.5% neutralized polyethylenimine as described by Verachtert, Bass, Wilder and Hansen (46). The paper used with solvents B—D and F-H was washed with 0.1 M citrate and then with distilled water. The following solvents were employed: (A) 0.3 M LiCl, (B) 95% aqueous ethanol-1.0 M ammonium acetate, pH 7.5 (7:3, v/v), (C) 1-butanol-acetic acid-H20 (4:1:5, v/v, upper phase), (D) l-propanol-ethyl acetate-water (7:1:2, v/v), (E) 0.5 M LiCl, (F) pyridine-ethy1 acetate- acetic acid-water (5:5:l:3, v/v), (G) ethyl acetate-acetic 1Kindel, P. K. and Watson, R. R., manuscript in preparation 7O acid-formic acid-water (8:4:l:3, v/v) and (H) 2—propanol- water (9:1, v/v). Radioactivity was detected on chromatograms with a radiochromatogram scanner, Model 7201 (Packard Instrument Co.). All other radioactivity measurements were made with a Tri—carb liquid scintillation counter, Model 3310, employing either: (A) a scintillation solution made as described by 1 Bray (84) or (B) 2,5-bis-[2-(5-tg§t-buty1benzoxazo1yl)]thio- phone in reagent grade toluene (4 gm/l). The portion of the chromatogram containing a radioactive compound was cut out and completely immersed in solution B in a scintillation vial and counted. The counting efficiencies with solution A and B were 79 and 60%, respectively. Protein was determined by the biuret method (58) before column chromatography of the enzyme. After passage through Sephadex G-100 it was determined by the procedure of Lowry, Rosebrough, Farr and Randall (59). After passage through the DEAR-Sephadex column protein was estimated by 280/260. Then the fractions containing apiin synthase were concentrated by ultrafiltration, dialyzed against buffer (2-500 ml volumes of 0.01 M sodium phosphate, pH 7.4, 1 x 10"+ M EDTA and l x 10'2 M B-mercaptoethanol for 1 hour) and the protein was measured by the procedure of Lowry, Rosebrough, Farr and Randall (59). Standard Assay for Apiin Synthase. -— Apiin synthase was mea- sured by quantitatively isolating [14C]apiin formed from I'7GA" and UDP-[U-1uC]apiose. The following standard assay was used. In a 12 m1 conical centrifuge tube, 2.5 nmoles 71 of sodium phosphate, pH 8.0, containing 1.2 nmoles of EDTA, 80 nmoles NAD+, 2.2 nmoles of UDP-[U—14C]g1ucuronic acid (110,000 dpm, glucuronic acid portion uniformly labeled within i15%) and 0.2 thiunits of duckweed UDPGA cyclase in a final volume of 25 ul. After incubation at 25° for 20 minutes, the amount of UDP-[U-1“c]apiose, UDP-[U-1“c]- xylose and d-D-[U—luC]apio-D-furanosy1 cyclic-1:2-P present in the standard assays was determined by chromatographing and further treating a standard assay as described on page 28.Iof Part2 . More than 95% of the UDP—[U-luC]glucuronic acid had been converted to UDP-[U-1uC]apiose and UDP-[U-luC]- xylose in the standard assay. The amount of UDP-[U-luC]apiose and UDP-[U—luC]xylose formed was about the same since the purity of various preparations of UDPGA cyclase used was about the same with respect to UDPGA decarboxylase. As shown in Part 2 page 28 34% of the UDP-[U-luC]glucuronic acid had been converted to UDP-[U-lnc]xylose and 63% was UDP-[U-luc]- apiose. Sometimes the amount of UDP-[U—luc]apiose formed was 3-5% more and the amount of UDP-[U—14C]xylose formed was the same amount less when the UDPGA cyclase contained less contaminating UDPGA decarboxylase. To conserve apiin syn- thase, UDP-[U-luc]glucuronic acid and duckweed UDPGA cyclase 14C]g1ucuronic the standard assay contained only enough UDP-[U- acid to yield a concentration of UDP-[U-luc]apiose which was approximately five times the Km that apiin synthase has for UDP- [U-luC]apiose. After incubation of UDPGA cyclase with UDP-[U-luC]glucuronic acid, 5.5 nmoles of "7GA" in water and apiin synthase were added to make a final volume of 50 ul. 72 Fig. 1. Chromatography of some of the compounds present in the standard assay mixture on polyethylenimine impregnated paper with LiCl solutions. Chromatography of apiin, d-D-[U-luC]apio-D-furanosyl-1:2-P, UDP-xylose, D-[U-luc]- apiose and UDP-glucuronic acid was performed on paper pre- pared as described for solvent A and E in the Materials and Methods. The solutions of LiCl were allowed to migrate 45 cm which in each case took about 4 hours. After chroma— tography at 220 the distance each compound had migrated was determined- O—O D-apiose A—A d-D-apio-D-furanosy1 cyclic-1:2-P D—D UDP-xylose A-g UDP-glucuronic acid O—O Apiin 73 P _ "CLARITY OF Li Cl _ _ O O O O 4 3 2 .... 2530 20m“. mmwbmirrzmo 74 Only 5.5 nmoles of '7GA" would dissolve or stay in solution at 250 without raising the temperature to dissolve it (see below). Therefore 20 ul of a solution of '7GA' that had been boiled (0.28 nmoles/pl) were added to give the maximum quantity of '7GA' which was soluble in 50 ul at 25°. The solution con- taining 0.28 nmoles of “7GA” per ul was prepared by briefly boiling '7GA' in water and then cooling to 25°. Apiin syn- thase was added to the standard assay mixture, it was incubated for 5 minutes at 250 and then heated at 1000 for 2 minutes. Protein was removed by centrifugation and the supernatant was applied to polyethylenimine impregnated paper for chromato- graphy in solvent E. The supernatant from each assay was streaked over a 2 cm portion of the paper. The protein pre- cipitate from each assay was suspended in 100 ul of 70% ethanol and removed again by centrifugation. The supernatant from the ethanol wash was applied on the same 2 cm wide por- tion of the paper. The chromatography paper was 12.5 cm long. After 4 hours of chromatography the origin, which contained [1nC]apiin, was cut out and the radioactivity measured as described in the General Methods. All the other compounds pre- sent in the assay mixture containing 1“C had been removed from the origin (Fig. 1). Apiin synthase catalyzed the formation of apiin from exo- genously supplied UDP-[U-luc]apiose. A modification of the standard assay is presented. The modified standard assay was used only to obtain the data given in Figs.8 and 9. In a 12 ml conical centrifuge tube, 2.5 umoles of sodium phos- phate buffer, pH 8.0, containing 1.2 nmoles of EDTA, 75 5.5 nmoles of "7GA" and a mixture of 0.032 nmoles UDP-[U—luC]- apiose (17,300 dpm) and 0.014 nmoles of UDP—[U-luc]xylose (7,500 dpm) were added. The reaction was initiated by the addition of apiin synthase, the mixture was incubated for 3 minutes at 250 and then heated at 1000 for 2 minutes. The assay mixture was further treated as described above for the standard assay mixture. A unit of apiin synthase is defined as the amount re- quired to form one umole of apiin per minute at 250 from UDP-apiose and "7GA" under the conditions of the standard assay. Absorbance and Solubility of "7GA". The absorbance of a solution of recrystallized '7GA' in water at 25° was determined at 335¢nu and at 268 mu. The molar absorbancy index, am, at 1 cm'l. The molar absorbency index at 268 mu was 17,400 liters mole"1 cm'l. 4 335 mu was 19,000 liters mole‘ At 25°, 1.1 x 10' moles of '7GA“ was dissolved in 1 liter of water. However, after boiling briefly 2.8 x 10"4 moles of '7GA' remained in solution in 1 liter of water after it was cooled to 25°. 76 RESULTS IDENTIFICATION OF ONE OF THE REACTION PRODUCTS FORMED BY APIIN SYNTHASE In vitro Enzymatic Formation of Apiin (Compound IV). -- In- cubation of NAD+, parsley UDPGA cyclase, UDP—[U—luC]g1ucuronic acid, '7GA” and apiin synthase resulted in the formation of two radioactive D-apiose-containing compounds. In Part 2 one of these compounds was identified as the product of in- tramolecular phosphorylation of UDP-[U-luC]apiose. The other is identified below. An incubation mixture consisted of 0.276 nmoles of UDP-[U-luC]glucuronic acid (105,600 dpm), 160 nmoles of NAD+, 4.8 umoles of sodium phosphate, pH 8.0, con- taining 2.4 nmoles of EDTA, 11.0 nmole of "7GA" and 0.145 mg of protein containing both parsley UDPGA cyclase and apiin synthase activity from the ammonium sulfate material which had been passed through a Sephadex G-25 column (40 cm in height and 2.2 cm in diameter) in a final volume of 100 ul. After prior treatment of the enzymes by passage through Sephadex G—25 or 0-100 exogenous "7GA" was required for the biosynthesis of the compound with an RF of apiin (Compound IV below). After incubation at 25° for 30 minutes, it was heated at 1000 for 2 minutes. T‘101101‘1'11'13 removal of the denatured protein by centrifugation, the supernatant liquid was applied to washed Whatman No. 3MM paper and chromatographed in solvent B. Scanning the chromatogram for radioactivity revealed that four distinct radioactive compounds 77 were present. Numbering them from the origin, they were designated Compounds I, II, III, and IV and had R values F of 0.12, 0.28, 0.66, and 0.73, respectively. Compound I was chromatographically identified in solvent systems A and B as UDP-[U-luC]glucuronic acid. Compounds II and III were found to have the same RF values in solvent systems A, B and C as UDP-[U-1u0]xylose and d-D-[U-luC]apio-D-furanosyl cyclic-1:2—P. Hydrolysis of Compounds I, II and III in 0.1 N H230“ revealed the presence of only one radioactive component 1I‘J'Ctjglucuronic acid in Compound I, in each compound: D-[U- D-[U-luC]xylose in Compound II and D-[U-1uC]apiose in Compound III. Only Compound IV is discussed in detail since its syn- thesis alone required "7GA". UDP-[U-laC]xylose and UDP-[U- 1I+C]apiose have been more extensively characterized in Part 2. a-D-[U-luC]Apio-D-furanosyl cyclic-1:2-P is a degradation product of UDP-[U-luc]apiose (Part 2). Identification of Compound IV as Apiin. —- Compound IV migrated as a single, radioactive area on paper chromatography in sol- vent systems A to C. In each of these solvent systems, it had the same RF as apiin whose RF is distinctly different from those of D-[U-14C]apiose, UDP—[0-1u0]glucuronic acid, UDP-[U—luC]xylose and d-D—[U-luC]apio-D-furanosyl cyclic-1:2-P. A small amount of an impurity was observed in the crystalline “apiin" when chromatograms were developed in solvent C (8). It is known that besides apiin, g. crispum contains small amounts of at least one other D-apiose—containing flavonoid. Nordstrom, Swain and Hamblin rigorously identified one such flavonoid as 7—(3',4'.5.7-tetrahydroxyflavonyl) 78 O-?-D-apio-?-furanosyl-(?)-B-D-g1ucopyranoside (see also Part 1). Acid hydrolysis of "apiin” yielded the crystalline "70A" which was used as a substrate in the incubation mixture described above for the formation of Compound IV and which also contained a small amount of impurity (about 5%), based upon the weight of each compound after elution. The impurity in “apiin" was observed only on chromatograms developed in solvent 0 where the R for the impurity was 0.83. The apiin R was 1.0 for the major component of "apiin" which was apiin assumed to be pure apiin. This major component migrated 28 cm when chromatographed in solvent C for 15 hours. The Rapiin for the impurity in '7GA" was 0.94 and the R for the apiin major component of '7GA' was 1.14. The major component in '7GA' was assumed to be pure 7GA. Grisebach and Bilhuber (60) have isolated crystalline "apiin" from g. hortense and found it contained a small amount of 7-(3'-methoxy, 4',5,7-trihydroxy- flavonyl) O-B-D-apio-D-furanosyl-(1»2)—B-D-glucopyranoside on the basis of its hydrolysis and spectral properties. Grisebach and Bilhuber (60) identified the principal product (isolated from g. hortense) and Gupta and Seshadri (45) identified the only product (isolated from P. crispum) which they found after hydrolysis of crystalline apiin as 7—(4',5,7-trihydroxyflavonyl) O-B-D—glucopyranoside. Compound IV migrated with an RF of the major component of the apiin and not the minor component of'apiin:’ Both of the components of “7GA” were eluted from chromatograms developed in solvent 0. Each component of "70A" was incubated as described above for the formation of Compound IV. The major com- ponent of "70A", when incubated with UDP-[U-luC]apiose and 79 apiin synthase resulted in the formation of only Compounds II, III and IV. Co-chromatography of this Compound IV with |'apiin" showed that it had the same RF as the major compon- ent of "apiin" on chromatograms developed in solvent C. None of Compound IV migrated with an RF of the minor com- ponent of "apiin". The minor component of ”7GA" when incubated as described above for the formation of Compound IV, yielded a very small amount of a substance which had the same RF as the minor component of l‘apiin" in solvent C. On the basis of these results and the observation that all of Compound IV migrated with an RF of the major component of ”apiin" in solvent C, Compound IV is considered homogeneous. None of Compound IV (1% or less) migrated with any other RF than the RF of the major component of “apiin" in solvent C. Compound IV was hydrolyzed in 0.5 N H230“ for 1 hour at 1000 in the presence of 0.15 umole of authentic D—apiose. This mixture and authentic D—[U-lucjapiose similarly treated were each spotted separately onto Whatman No. 3MM paper. Chromatography in solvent B showed that Compound IV was no longer present and only a single radioactive compound with the same RF as the authentic D-[U-luC]apiose was observed. This compound contained eighty-six and one-half percent (86.5%) of the starting radioactivity which was all the radioactivity' found on the chromatogram. This is the average of 3 experiments whose values were 87.9, 87.2 and 84.3 percent. The recovery on the chromatogram of authentic D-[U-1uc]apiose identically treated was 87.1 percent. This shows that the amount of 80 I D-[U-14C]apiose recovered was the same as the amount ofradioaCtive material obtained from Compound IV. This suggests that all of the radioactive material from Compound IV was a single l“0]apiose in compound with the characteristics of D-[U— solvent B. The radioactive material with an RF of D-apiose obtained from Compound IV was eluted. Aliquots of this radioactive material were co-chromatographed with carrier D-apiose (0.211mole per aliquot) in solvent A, B, C, D, F, G and H. This radioactive material in each solvent system migrated with the same RF as the carrier D-apiose which was visualized with aniline hydrogen phthalate (73). Apiin has a distinctly different RF from D-apiose in solvent systems A, B, C and D. The radioactive product of acid hydrolyzed Compound IV has the same chromatographic properties as the compound Gustine and Kindel (39) characterized by periodate oxidation to be D-apiose. Compound IV was further identified as apiin by recrystal- lization of a mixture of Compound IV and crystalline "apiin" to constant specific activity. Compound IV (41312 dpm) and 2.25 mmoles of "apiin” were dissolved in 144 m1 of 95% ethanol by boiling. The hot solution was filtered through Whatman No. 1 filter paper and the crystals were washed with 7.5 ml of boiling 95% ethanol. After this solution stood at 220 for 21 hours and 3 hours at 4°, the crystals were collected and air dried. This process was then repeated by redissolving the dried crystals in 95% ethanol (Table I). To further identify Compound IV as apiin the acetate derivative of a mixture of Compound IV and ”apiin" was 81 .oHoEE\Eac swam mm: opwumom gsfiaaog was opopoom >H ossoasoomo: H mo zpfl>apom candooam oopoonxo 02p one oaoaa\emo comma mm: asfidnmg one >H ossonaoo Udag mo mpa>wpom camfiooam cocooaxm onwl. .nopm nofipmuaaawpmacoop w50a>opa on» scum oopo>ooon unmosmm .2. o.osmm s.~: m.a: s o.om~m m.ow m.om m o.HHmm H.mm H.Hm N o.mamm H.ao m.mo H oaoss\eao R m an. omopoow : as V mpmpmom >H onsomsoo_oaa_ tomam>ooop one» toono>oooh cones: hpa>apom onHoopm noon >H undonaoomosau endowed :«HQ4. :oHpmNaaampmhho u.mnam m.mw N.nw m s.mm:m o.~o H.mm : m.nmmm d.mm m.nm m o.mm~m p.35 5.55 N m.:oom m.mm “.mw H oHoEE\aao R a A.sfianm.\>H onsogaoomosagv toopo>ooop *ooho>ooon popes: *.suw>apoc oscdoo m >H onsonsoomosag .qwan<. noapauafiflmpmsgo .opwpoom >H onsonaoomoeau can mumpoow asadnmg mo manpxfis w dam >H onsonsoomodag and asaanm. no ohspxaa a mo scapunaHHMpmhuoom .H mqmdpo< .n. .pxee we» as *t. .ncmmzn pmzammm couaamao mm: pa amped coached HHmEm m :o dopammme mm: mpfipauoHpmHmp one cause unmadmmnsm one .H 0» .ampm sofipomspxc on» ma H 0» Hence pom some mm: omega team cases no unfl>fipom cacaoomm on» o» mmmaomo <0ma: mo spfi>daom camaomgm on» mo cause one: ee.o e s.me m ms.m assessesaem-mapom semeaesa «emu: efleas seseeeaaassm fleece caeaeecm deem .mo>moH acamnmn scum cmmSpchm added mo soaumOHmHLsm .HHH mqm<9 87 Fig. 2. The elution pattern of UDPGA cyclase and apiin synthase from Sephadex 0-100. The ammonium sulfate frac- tion containing apiin synthase ( I" """"" I--"""""I ) and parsley UDPGA cyclase ( 0 O o ) was applied to the Sephadex 0-100 column as described for the Sephadex G-100 step. The enzymes were eluted with buffer at 1.0 ml/minute and 12.2 ml fractions were collected. The amount of protein in each fraction was measured ( o o o ). 88 1W I NISLOIJ 9W O O N '- _ In #T T Q “3 g 1.__fi__., I .- _____ .I" ...... v ....'o’ ...... . ........ 0’ i. ...“ ..... II "y 9.. ‘J‘... i o ------ a .. .... the, “um-u... c 1.. '9“ i/ 'u ’o/ ' :- w 5° \O\O \O .V. t I a... o / o/.—f \. \ g~ ‘ . __ M _.._ .\ _ d a e’ “\ ALIAIADV DHIDJJS J is s L "2 '- O 1W I SWAIN! JO SllNfll‘l'llW 25 FRACTION NUMBER 89 Fig. 3. Chromatography of apiin synthase and UDPGA cyclase on DEAR-Sephadex. The Sephadex 0-100 fractions containing apiin synthase ( I ----- --l--------l ) and some parsley UDPGA cyclase ( o—o—o ) were applied to the DEAE-Sephadex column as described for the DEAE-Sephadex step. Protein was measured ( o O O ) by the procedure of Lowry, Rosebrough, Farr and Randall (59) after concentra- tion by ultrafiltration and dialysis. Fractions were col- 1ected starting with the application of the linear gradient described in the text. Fraction number 1 is the first one collected after application of the gradient. No UDPGA cyclase or apiin synthase was observed in the solutiomscol- 1ected before application of the gradient. Protein in frac- tions 1-5 and 18—20 was measured by absorbance at 280/260. 90 1W I NIBIOUJ 9W ‘0 +-—~ 4? umuav amazes I s 0. 4‘40 7 o/ t’ /.'/° .. \o / \e’” \o a: “y”. \ 40.2 15 20 IO FRACTION NUMBER ‘ O l , O - .l I O In - 0. 0 0 1w I iWAZN! :IO SllNfllTllW 91 PROPERTIES OF APIIN SYNTHASE Linearity of the Apiin Synthase Reaction. -— The data in Fig. 4 (standard assay), Fig. 6 (standard assay) and Fig. 8 (modi- fied standard assay) show that the transfer of D—apiose from UDP-apiose to "7GA' was linear with time for 5 minutes. The data in Fig. 5 (standard assay), Fig. 7 (standard assay) and Fig. 9 (modified standard assay) show that the reaction catalyzed by apiin synthase is linear with increasing concen- trations of apiin synthase over the range of apiin synthase measured. The rate of apiin formation was directly propor- tional to the amount of apiin synthase present. Crude pre- parations of apiin synthase such as described for the extrac- tion and ammonium sulfate step were almost linear with respect to enzyme concentration. However, some apparent inhibition of the reaction was noted particularlyat higher concentra— tions of enzyme which was removed by passage through Sephadex G-25 or 0.100. This treatment removes small molecular weight compounds which probably include some of the large quantity of the product, apiin, present in the cell-free extract described in the extraction step and the ammonium sulfate step. Factors Affecting the Stability of Apiin Synthase. -- Stability of the enzyme to storage largely depended on the protein con- centration, temperature and the addition of glycerol. When the enzyme was mixed with an equal volume of glycerol and stored at .200 good stability was achieved. Enzyme from the .Sephadex G-100 step stored at u° (4 mg/ml) for 12 hours lost almost all activity (>95%). Addition of glycerol to make ‘the solution 50% glycerol by volume preserved enzymatic activity 92 Fig. 4. Formation of apiin by apiin synthase as a function of time with low concentrations (< Km) of "70A”. The forma- tion of apiin by apiin synthase was followed using the standard assay. The assay mixture contained 0.6 nmoles of ”70A" in place of the 5.5 nmoles in the standard assay. The reaction was initiated by 0.032 milliunits (1.44 ug of protein) of apiin synthase purified through DEAR-Sephadex step. The stan- dard assay mixture was incubated for the indicated times (1 to 5 minutes) at 25° before termination. Fig. 5. Effect of apiin synthase concentration on reaction velocity with low concentrations (< Km) of "70A“. The for- mation of apiin by apiin synthase was followed using the standard assay. The assay mixture contained 0.6 nmoles of "70A" in place of the 5.5 nmoles in the standard assay. The reaction was initiated by the indicated amounts of apiin synthase purified through the DEAF-Sephadex step (0.0024 milli- units/1.0 pg of protein). The standard assay mixture was incubated for 3 minutes at 25° before termination. 93 23.23:. 62 «aha-2.2 no.0 o 3 ClinlOi N lldV $31OWN 94 Fig. 6. Formation of apiin by apiin synthase as a function of time with low concentrations (< Km) of UDP-apiose.' The formation of apiin by apiin synthase was followed using the standard assay except that it contained 0.2 nmoles of UDP—[U- ll‘nglucuronic acid (100,000 dpm). The reaction initiated by the addition of 0.057 milliunits of apiin synthase (12.5 ug of protein) from the DEAE-Sephadex step. The assay mix- tures were incubated for the indicated times at 25° and further treated as described in the Materials and Methods. Fig. 7. Effect of the amount of apiin synthase on reaction velocity with low concentrations (< Km) of UDP-apiose. The formation of apiin by apiin synthase was followed using the assay described in the legend of Fig. 6. However, the reac- tions were initiated by the addition of the indicated amounts of apiin synthase from the DEAE-Sephadex step (0.0046 milli- units/ug of protein) and were incubated for 3 minutes at 25° and further treated as described in the Materials and Methods. 95 2.2.03; 13M») 0: 9m 4 muh32_¢< — 0.0 L N 0. O aawaoa NlldV so snow N . A ‘91.,- i u .f ,.,. 91.: ) 4 .4 A?» a lbw v 96 Fig. 8. Formation of apiin by apiin synthase as a function of time with exogenous UDP—apiose. Apiin synthase was assayed by the modified standard assay described in the Materials and Methods. The reaction was initiated by 0.046 milliunits (6.2 ug of protein) of apiin synthase from the DEAE-Sephadex step. The reaction contained 0.032 nmoles of UDP-[U-lucjapiose (17,300 dpm) and 0.014 nmoles of UDP-[U-IQCnylose (7,500 dpm). The reaction was incubated for 3 minutes at 25° and then heated to 100° for 4 minutes. Fig. 9. Effect of the concentration of apiin synthase on reaction velocity with exogenous UDP-apiose. Apiin synthase was assayed by the modified standard assay described in the Materials and Methods. The reaction was initiated by the in- dicated amounts of apiin synthase from the DEAE-Sephadex step (0.0148 milliunits/pg of protein) and contained 0.032 nmoles of UDP-[U-lucjapiose (17,300 dpm) and 0.014 nmoles. of UDP-[U-lucjxylose (7,500 dpm). The reaction was incubated for 3 minutes at 25° and then heated to 1000 for 4 minutes. 97 2.2.05. ..m o: mmhayzi N , 3.153 c M: 000. 000. SJ'IOWN GJWUOi NlldV 98 at -200. Apiin synthase after DEAF-Sephadex step (17.3 mg/ml) increased its apparent activity 30% with addition of an equal volume of glycerol. After 1 week at .20° it still had 112% of the activity observed before the addition of glycerol. Two weeks after adding glycerol only 80% of the original activity remained. The standard assay was used in the above assays. pH Optimum of Apiin Synthase. —_ Apiin synthase has optimum activity between pH 7.6 - 8.4 (Fig. 10). In this range the enzyme has almost the same activity with the two buffers tested. As indicated in Fig. 10 apiin synthase activity on either side of this range was near the optimum value and only gradually decreased in activity with a change in pH. Affinity_of Apiin Synthase for "70A" and UDP-apiose. -- The Km for "70A" was calculated from the data presented in Fig. 11. It is 7.0 x 10-5 M. The Km for UDP-apiose was calculated from the data presented in Fig. 12. It is 0.6 x 10-5 M. Effect of Various Ions on the Activity of Apiin Synthase. -- Apiin formation by apiin synthase (from the DEAE-Sephadex step) was measured in the standard assay. The various ions tested were present in the standard assay at 1 mM final concentra- tions. The compounds tested were NHucl, FeClB, CaClz, MgClZ, NaCl, KCl, NaMoOB, NaBOB, NiClZ, 00012, CuCl2 and ZnClz. None of these compounds increased apiin synthase activity. Only the latter four metal ions decreased the enzymatic activity with a decrease of 29% for NiClz, 40% for C001 88% for CuC12 2’ and 95% for ZnClz. The presence of EDTA, d,a'-dipyridy1, 8-hydroxyquinoline and KF at 1 mM final concentrations in the standard assay mixture had no effect on enzyme activity 99 Fig. 10. Effect of pH on the reaction velocity of apiin syn- thase. Incubation mixtures were prepared in a volume of 40 u] containing 2.25 nmoles of UDP-[U-IQCngucuronic acid (88,000 dpm), 50 nmoles of NAD+, 0.8 moles of sodium phOSphate, pH 8.0 and 0.2 milliunits of UDPGA cyclase. After incubation at 25° for 60 minutes, 11 nmoles of "70A“ and either 5.6 nmoles of sodium phosphate ( A. A ) or 5.6 umoles of Tris-HCl ( AdnuunnA ) buffer were added. The pH of these final solutions was measured in larger assay mixtures which did not contain the UDPGA cyclase, apiin synthase and UDP-[U-lucjglu- curonic acid. The reaction was initiated by the addition of 0.012 milliunits of apiin synthase (15 ug of protein) from the DEAF—Sephadex step making a final volume of 100 ul. The assay mixtures were further treated as described in Materials and Methods. RELATIVE ACTIVITY u d O o 8 I T ’ V— \ D U I ”H— 1 ch 0...... <1 ..... OOI 101 Fig. 11. Effect of "7GA" concentration on the velocity of the apiin synthase reaction. The formation of apiin was measured in the standard assay with various concentrations of "7GA" ranging from 0.02 x 10-5 M to 9.07 x 10-5 M. Each assay contained 1.24 nmoles of UDP-[U-luC3glucuronic acid (90,000 dpm) which was incubated with 0.12 milliunits of duckweed UDPGA cyclase (0.2 mg of protein) 2.5 umoles of sodium phosphate, pH 8.0, containing 1.2 nmoles of EDTA and 100 nmoles NA0+ . After 15 minutes at 25° the 30 ul reaction mixture contained 0.84 nmoles of UDP-[U-lucjapiose (63,000 dpm), 0.30 nmoles of UDP-[U-luC]xylose (22,500 dpm), 0.1 nmoles of UMP and 0.1 nmoles of d-D-[U-lucjapio-D— furanosyl cyclic-1:2-P (7,500 dpm) in place of the UDP- [U-1ucjglucuronic acid previously added to the mixtures. The various amounts of "70A“ were added to the assay mix- tures and 0.032 milliunits of apiin synthase from the DEAE- Sephadex step (1.4 ug of protein) was used to initiate the reaction. The assay mixtures were further treated as des— cribed in the Materials and Methods. The insert in a Lineweaver-Burk plot of the same data. The Km was determined by the least squares method using the data shown in the insert. 102 oo— \ 1 86 I mad ALIDO'IEA (alnNIW/ssnoww) 103 Fig. 12. Effect of UDP-apiose concentration on the velocity of the apiin synthase reaction. The formation of apiin was measured in the standard assay with various concentrations of UDP-apiose ranging from 0.48 x 10-5 M to 17.8 x 10"6 M. Assay mixtures were prepared as described in the standard assay and UDP-[U—luC]glucuronic acid was added in varying amounts from 0.15 nmoles (66,000 dpm) to 1.58 nmoles (110,000 dpm). After incubation with duckweed UDPGA cyclase the amount of UDP-[U-lucjapiose formed was determined. ”76A" (5.5 nmoles) was added and the reaction was initiated by the addition of 0.023 milliunits of apiin synthase (5.0 ug of protein) from the DEAE-Sephadex step. The reactions were incubated at 25° for 2 minutes. The assay mixtures were further treated as described in the Materials and Methods. The insert is a Lineweaver-Burk plot of the same data. The Km was determined by the least squares method using the data shown in the insert. 104 72:. 3.2: .33 a. s a. so 0 J.» '\ a $3. 3.9.2.33 \fi. g . \ 15.0 \ (alnNIWIsaloww ) AIIDO13 A 105 except in the case of EDTA which slightly stimulated enzymatic activity (10%). The sodium phosphate buffer containing EDTA in the standard assay mixture was replaced by 2.5 umole of Tris-HC1 buffer, pH 8.0 in the above 17 assays. Effect of Sulfhydryl Reagents on the Activity of Apiin Syn- thase. ~- Apiin synthase after DEAE-Sephadex step was incubated with 1 mM final concentrations of p-chloromercuribenzoate, N-ethylmaleimide, iodoacetamide and oxidized glutathione in the standard assay mixture. All (100%) of the apiin synthase activity was lost with p-chloromercuribenzoate, 75% with iodo- acetamide, 25% with oxidized glutathione and 18% N-ethyl- maleimide. Inhibition of Apiin Synthase Activity by Various Uracil Com- pgunds. -~ Enzyme from the DEAR-Sephadex step was assayed by the standard assay in the presence of varying concentrations of uridine, UMP, UDP, UTP, UDP-galactose, UDP-glucuronic acid and UDP-xylose (Table IV). All inhibited apiin synthase to some extent but UMP and UDP inhibited it most at the lower concentrations. UDP-glucuronic acid, UDP-xylose and UTP at 4 l x 10' M concentrations only decreased the apiin synthase activity about 20%. UDP inhibited this much when present at l/100th this concentration. UDP-glucuronic acid and UDP-xylose a at 1 x 10' M concentrations only decreased the apiin synthase .4 activity about 10% from that obtained with 1 x 10 ’ M and 6 l x 10' M concentrations of these compounds. Based upon these results it was concluded that UDP-xylose formed with the UDP-apiose in the standard assay (1.5 x 10"5 M) or added with exogenous UDP-apiose in the modified standard assay -6 (0.6 x 10 M) probably does not affect significantly the 106 reaction of apiin synthase at the low concentrations present in the assays. The formation of UDP occurs as the apiin syn- thase reaction progresses resulting in the appearance in the standard assay of not more than a concentration of 0.5 x 10'6 M UDP at the end of a 5 minute assay. A small amount of UMP would also be formed from the intramolecular phosphorylation of UDP-apiose in the standard assay resulting in not more than 2 x 10'"6 M UMP at the end of a 5 minute assay for apiin syn- ” thase. From the data presented in Table IV inhibition by the UDP formed in the assay should be less than 6% of the Optimum rate. Inhibition of apiin synthase by the small amount of UMP formed as a breakdown product during the formation of UDP-apiose in the standard assay would be less than 10% of the optimum rate. Fractionation of Apiin Synthase with Ammonium Sulfate. ~- During the purification of apiin synthase, it was observed that most of the UDPGA cyclase isolated by the procedure described in the extraction step was removed during the puri- fication of apiin synthase. The same extraction step was used to prepare UDPGA cyclase and most, but not all of the apiin synthase present, is removed during the subsequent purifi- cation step (Part 4). Since some UDPGA cyclase is not removed, apiin synthase was fractionated with ammonium sulfate to attempt to isolate apiin synthase without contaminating UDPGA cyclase. The fractions in which apiin synthase was found are reported below. The same fractions contained UDPGA cyclase and UDPGA decarboxylase activity and are reported in Part 4. Apiin synthase was isolated from parsley leaves as described 107 .OOH ho mSHm> 0:» sopr we: :oHss onsuxHa homes pudendum on» op needs me: muszomsoo HHoss: e>onw es» no use: sen: cosHmuno zaH>Hpom ommsushm :Haaw 0:» on copwasoo mH mpH>HuoHuod omdsushm nHHQ< unsonaoo .mussomaoo HHods: msoHsdb an mascuszm sHHnd no soHpHnansH .>H mqmHpod ones» m sHHndt mg: Goa 2h 3.3-5.9: oc.~T.S.~ m3. coca om E.$A.oi aflmxlmmé 9+: «86 NS 3.3-m.~$ 3.11.84 :4. @36 HnH An.~:uo.m3 om...” TmoH NS oN~.o om Ao.mmum.:nv no...” Tom; Nam Bud S 3.3-981 om; T34 Ac: pd camMHsm :Homosn mo ma azasosad mo enamHsn ssHsoaau meassaHHHa Havoc unassHHHHa we scapdnspsm RV no hudndHoa apabdpod Hduoa hpnpapod edudoonm sHououn Hence 90pm .opduHsu asHsoasd :uHs omezunhm sHHnd mo sodesoH»0dhm u> mqmHuod ommHoho «can: use seamen sH voosonSm tea was oespHaHoeaa one .moussHe om pom w x oom.:H pm sofipmwsmdapsoo eon“ mumpaaaoeamt no.0 maoo.o m 2.0 88.0 1 om.a moao.o am.a amoo.o sHopoaQ we mpHasHHHHe mpHesdHHHe on: topmpHaHooaa mom peopdsaonsm poem 53H eopm OMOH mama we canons am ooa acts spaaapod Hoaoa aaaaaaoo oaaaooam saunas aw ooa eoam :Hopoan Hopes oemmas .monamQ mo muooa use meopm .mopon on» :« ondaoao «can: so soapsndapaan .H mamas 125 leaves are the best source of UDPGA cyclase activity although some UDPGA cyclase activity is observed in the stems and less in the roots. No UDPGA cyclase was observed in the resuspended precipitate from the stems or leaves. PURIFICATION OF PARSLEY UDPGA CYCLASE A typical purification of parsley UDPGA cyclase is detailed below and summarized in Table II. All procedures were carried out at 0-50 unless otherwise stated. Extraction. -- The extraction step was carried out exactly as described in the purification of apiin synthase in Part 3. Ammonium Sulfate. -- The ammonium sulfate step was carried out exactly as described in the purification of apiin synthase in Part 3. Sephadex G-100. -- The Sephadex G-100 step was carried out exactly as described in the purificationof apiin synthase in Part 3. Most of the parsley UDPGA cyclase was eluted into 6 tubes, numbers 38-43. Their contents were combined and used in the DEAE-Sephadex step. DEAE-Sephadex. -- A column 10.0 cm in height and 2.2 cm in diameter was prepared from defined DEAR-Sephadex. The DEAE- Sephadex was treated as follows: (1) with 0.1 M sodium phos- phate, pH 7.4 until the pH remained at 7.4 (2) 4 times with 400 ml of 0.01 M sodium phosphate, pH 7.4, containing 1 x 10'“ '2 M EDTA and l x 10 M a-mercaptoethanol. Just before use the column was equilibrated with 500 ml of the above buffer. Half of the material from the Sephadex G-lOO step was applied. After application the column was washed with 60 m1 of 0.1 M 126 NaCl in buffer. UDPGA cyclase was then eluted by increasing the NaCl concentration linearly. The linear gradient was set up with 200 m1 of 0.3 M NaCl in buffer in one beaker and 200 ml of 0.1 M NaCl in buffer in the mixing beaker. Fractions of 9.2 ml were collected. Almost all of the parsley UDPGA cyclase eluted into 8 tubes, numbers 23-30, which were combined and concentrated by ultrafiltration to about 1.0 ml. After 2 hours dialysis against buffer 1.0 ml of glycerol was added. Enzyme prepared in this manner constitutes the enzyme charac— terized below. UDPGA cyclase was purified 93 fold and was almost free from apiin synthase. More than 98% of the apiin synthase present in the cell-free extract (extraction step) was removed from the UDPGA cyclase after purification through the DEAE-Sephadex step. Much of the UDPGA decarboxylase activity present tithe cell-free extract was not removed from UDPGA cyclase by purification through the DEAE-Sephadex step (Fig. 4, 10). Linearity of the Parsley UDPGA Cyclase Reaction. -- The data in Fig. 1 show that the reaction catalyzed by parsley UDPGA cyclase is linear with two different concentrations of UDP-[U-lnc]glucuronic acid. It is linear for more than four minutes at the lower concentration and for a longer time at the higher concentration. The data in Fig. 2 show that the parsley UDPGA cyclase reaction velocity increases linearly with increasing concentrations of UDPGA cyclase. 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