DOCTORAL DISSERTATION SERIES PUBLICATION: 5931 AUTHOR: Ram Baran Prasad, Ph. D ., 1951 Michigan State College TITLE: ESTIMATES OF THE HERITABIUTY OF GREASE FLEECE WEIGHT AND GRADE AND THE REPEATABILITY OF GREASE FLEECE WEIGHT IN SHEEP University Microfilms, Am Arbor, Michigan ESTIMATES OF THE EERITABILITY OF GREASE FLEECE WEIGHT AND GRADE AND THE REPEATABILITY OF GREASE FLEECE WEIGHT IN SHEEP By RAM BARAN PRASAD A THESIS Submitted to the School of Graduate Studies of Michigan S t a t e .College of Agriculture and Applied Science in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Department of Animal Husbandry 1951 ESTIMATES OF THB HERITAB ILITY OF GREASE FIEECE WEIGHT AHD GRADE AND THB REPEATABILITY OF OREASE FLEECE WEIGHT IN SHBBP Bjr RAM BARAN PRASAD AS ABSTRACT Submitted to the School of Graduate Studies of Michigan State College of Agriculture and Applied Science in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Department of Animal Husbandry Year Approved 19S1 Mam B# Prasad Abstract Herltability estimates for grease fleece weight and grad# and repeatability #itlmat# for g m « « flacc# weight war# de­ termined from sheep records from the Michigan State College sheep flock* Hie data included 1,699 records from 412 ewes of the Oxford, Shropshire, Hampshire and Southdown breeds, covering the period from 1939 to 1949# A study of the contribution of oertain environmental factors to grease fleece weight was made and appropriate adjustments were indicated* The study of environmental factors included the effects of age, number of lambs raised, breed and year on grease fleece weight* The least squares proceedure of analysis was used to study these environmental effects and the fol­ lowing is the estimate of the effects of different environ­ mental factors! General Means (Constant Environment) 7+99 Deviation from General lieans for age 2 years*•»••»•••« 0*36 . a 3 4 » 9 « •••«••*»•* 0*04. 6 a ****»•••**.—0*48 7 a •* •***—0*44 Ran B* PraseA Deviation from General limmrtm fnw tesweefl CksfAMi -* 0*94 0*18 Shropshire **.* ••• — 0*06 — 1*08 Deviation from General Means for Ho* of iambs Raised 0*18 Single**4 0*09 Triplet*< — 0*17 Deviation ^rox* General Mean for year oir Records made*1984*•****0*151 1988* *•••*0* 104 1986.... *0*727 1987***** *0*ISO 1938**•bm *0*6831999* *••• *0*636 1940* *****0*999 1941* ***•*0«169 1949**•• 1949...* **0*980 •w——18mmnr 1944*••• **1*479 1946*••• *•1*304 1946..*. **0*948 194?*#** **0*071 1948** ****0*911 1949**•« •*0*711 The analysis or variance was dona by the method of fitting constants and only tha environmental factors which accounted far at laast 6 percent of tha total variations were eon-* aldarad to ba important enough to justify adjustment in a salaetlon program* Th* environmental factors that needed adjustment vara braad and yaars in grease fleece weight* On Ram B* PrtMd - 3 comparison of the genotypic parameters of gntit fleece weight to grade it woo found that tha heaviest flaaoa weight was associated with tha poorest grade* Tha phenotypic correlation coafficiant between grease flaaoa i waight and grade was estimated by correlating tha two ; j characters in tha same animal and waa found to ba *0*3Sf 0*j04#, Repeatability for grease fJs aea waight waa estimated by tha method of intra class correlation from records of 156 awes of the Shropshire bread and this estimate was <>♦44 t 0*02* i ,1; Estimates of heritablllty, after adjusting for 1st* 1 portent environmental effects, ware first made for each of tha four breads by the method of lntra~slre regression of f offspring on dam and lntra-sire daughter-dam correlation* Than the weighted average of the four breads and two/ methods ware taken to give the bast estimate of hep^tablllty< For grease fleece waight 160 daughter-darn pairs were used In analysis and the bast estimate of heritability was found to be 0*38 ± 0*11* For grease fleeoa grade 167 daughter- dam pairs ware used and the estimate of found to ba 0*20 1 l^ty was *10*. I * ,y The. genetic correlation waa estimated by t h ^ W m a l a t '5 S'- Vi 0J = M n rn J b B B n M . J f® Mr it ii) (oov ja Ji) | ft Ran B# Ps^kead - 4 • \ . \ s . \ When the aubaorlpta (l) and (8) represent tha parental and I t fllllal generation respectively and I, J are two characters# Tha estimate waa found to ba -0*57# \ ! \ < i ! Under tha aaauaptlon that 85 percent pf tha' awaa ere ■ ; replaced aaeh year with awa lambs front tha beet 00 paroant of V.'; I / tha awaa and that tha average loss due to daath ^hd aoeldente la 15 paroant} tha antloipated gain for a flock ?f 100 awaa • s : r 1 In ona yaar waa aatlaatad to ba 0*17 pound for gjpeaae flaaoa waight and a llttla laa8 than 0#10 tinit for greaae flaaoa -f ' grade. The gain in grade whan interpreted In t|0ma of tha par* '■ • / eantaga of anlaala which may be expected to toove up one grade In ana year la a llttla laaa than 10 kkdreent* A CK N OVJ DEDGi.CENT The author is grateful to the Government of Bihar (India) for financial aid involved in stay and study in U# S. A. and to Dr. Ronald H. Nelson, Head of the Depart­ ment of Animal Husbandry for his major help and suggest­ ions in preparation of this thesis. A word of appreciation is extended to the men of letters of the guidance committee and to Dr. Y/illlam D. Baten, Research Professor of Statistics, for his help in statistical procedures. TAB HE OF CONTENTS Page INTRODUCTION (a) General, . .......................... 1 (b) Heritability................................ 5 (c) Repeatability............................... 8 (d) leans of Increasing Expected C ai n ...... 10 FETECDS AND KATERIAL (a) Source of Da t a ................ 13 (b) Characters Observed......................... 15 ESTIMATES OF PHENOTYPIC PARAMETERS (A) Phenotypic Leans, Variance and Correlation. 16 (B) Study of Environmental Effects on Fleece Wt.22 (a) Method of Analysis...................... 23 (b ) Results................. 30 ESTIMATE OF REPEATABILITY (a) Methods of Estimating Repeatability........ 37 (b) Calculation of Repeatability............... 38 (c) Comparison with Published Results.......... 40 ESTIMATES OF HERITABILITY (a) Methods of Estimating Heritabi li t y......... 43 (b) Calculation of Heritability of Fleece Wt... 46 (c) Calculation of Heritability of Fleece Grade 55 (d) Comparison with Published Results.......... 59 ESTIMATE OF GENETIC CORRELATION (a) Definition................................... 61 (b ) Calculation........ 61 TABLE OF CONTENTS CONTD Page DISCUSSION...... :.................................... 66 APPLICATION........................................... 72 SUMMARY................................. 78 LI TERATU RE CI TED...................................... 80 INTRODUCTION (a ) - General. Biological investigations on sheep production have tended to concentrate on- the Important problems o.f pathology, parasitology, and nutrition. The impressive losses from disease and drought have directed research to problems whose solution was an immediate necessity. fore recently the need for basic information on genetic factors has been recognised. The theoretical basis for genetic studies that might be applied to most economic characters has been developed largely by his her (191b, 1930) and ’7ri_,ht (1931, 1931). The logical consequences of hendellan inheritance, have been interpreted in statistical terms, so that the results of various systems of selection can be predicted with some degree of accuracy. Lush (1935, 1945, and 1948) has de ­ veloped applications of genetic theory to animal breeding practice. Since improvement in the genetic composition of one gener­ ation of a population is transmitted to succeeding generations, each rung in the ladder of genetic improvement is permanent and may be considered a capital gain. Hence, a small genetic ad­ vance is worth considerable effort because the expense Incurred in advancing one rung will yield dividends for many generations In order to better understand the genetic advance that can be made in wool production, the purpose of this study was to estimate heritability of grease fleece weight and grease fleece grade, and repeatability of grease fleece weight. - 2 Since genetic gain may be increased by the elimination of identifiable sources of environmental variation the following environmental effects on grease fleece weight were also studied:1-Age of shearing. 2-Ereed. 3-Itumber of lambs raised. 4-Year in which the record was made. Little need be said concerning the importance of fleece yield. Fleece contributes an important source of income in sheep production. Winter, etal. (1946) found that fleece yield was responsible for fifteen to twenty five percent of the income in sheep production. The following discussion will explain concepts funda­ mental to this study. The phenotype of any individual organism is determined by its genotype and the environment in which it lives. Its phenotype will also be affected by interaction of genotj’-pe and environment; that is, the value of a given genotype will depend on the environment in which its possessor -1 - develops. In case of traits such as fleece weight, which are expressed more than once in an animals life^environment can be divided into two portions; one portion the effect of which is constant for all expressions of tne trait, and another portion, the effect of which is variable for different expressions of the trait. - 3 Let P symbolize the phenotypic measurment of a p ar ­ ticular trait. For example, in the case of wool production, P would be the pounds of wool obtained in one shearing. If p is used to symbolize the phenotypic deviation from the population mean, (p*P - P) the deviation may be expressed as a function of the contributing effects such that: + "*j. ■*" -h ZljKet C K. whereis the phenotypic deviation from the population mean for the oC th expression of the k th in­ dividual with I th genotype developed In the j th environment. J/v is the effect of the i th genotype is the effect of the j th environment Ck is any environmental effect constant for all the expressions of the k th individual. Is the sum of the Interactions among the par­ ticular combination of and cifc. Is the error In measurement associated with the Ijk*C th expression. Under the assumption that the genotypes occur among the various environments at random, the phenotypic variance may be partitioned in the following manner; ** + ^Heritability In a broad sense, heritability (Hb) of a characteristic is then Hb 5. i . CPp This simply answers the question; what fraction of the observed phenotypic variance is due to hereditary differences between those Individuals; heredity being considered as the whole combination of genes in each individual? Theoretical­ ly heritability can range from zero to 1.0, although actually these extremes are rarely encountered, A heritability estimate pertains at to a particular characteristic in a certain population somedefinite moment. It can be raised or lowered by any breeding system or practice or any alteration of environment which will increase or decrease either y, (T*c or (T\ . Lush (1948) discussed the following features of heritability in the broad sense which seem to deserve mention heres(a) Presence or absence of a characteristic at birth is not a criterion of its heritability, (b) Rarity or abundance is no criterion of heritability. Rarity or abundance comes into the picture only in that a rare contrast contributes little to the total varience in a population while if the same contrast were more abundant It would supply much variance. - 6 (c) Dominance or recessiveness has nothing to do with heritability in the broad sense, although it does lower the resemblance between relatives, A completely recessive trait is as truly hereditary as a completely dominant one. (d) Perfect heritability does not mean perfect likeness of parents and offspring. The sampling at segre­ gation, and the fact that the individual has two parents not necessarily alike in the characteristic being considered, are enough to keep the resemblance between parent and individual offspring from being perfect, even when heritability is perfect. As far as the animal itself is concerned its genotype functions as a whole. This actual functioning of the genotype as a whole is what is meant in the broad defini­ tion of heritability. But the gene, not the whole genotype is the unit in transmission from parent to offspring. If it is assumed that each gene substitution has, in every genotype, exactly the same effect as the average effect which it actually does have in that population, then by adding all these average effects of the constituent genes we can get an "expected" functioning or value for each genotype. Variance among these "expected" values con­ stitutes the additively genetic variance in that population. Therefore, the narrowest definition of heritability, H n , for a particular trait is defined as the fraction of the total phenotypic variance which is additively genetic, ff-j, __2• - 7 Permanent improvement from phenotypic selection is pro­ portional to this heritable fraction of the observed variance and varies from trait to trait (Lush 1935). Thus, herit­ ability is important to the breeder because it represents the portion of superiority in selected parents which can be expected to be passed on to their offspring. This expected genetic gain, g s , from a single cycle of selection for a single trait measured in terms of the difference between the expected mean performance of the offspring of selected parents and of the offspring of all possible parents may be estimated, (5)?in the following manner; Ss (=) sH where the selection differential, s, is the mean difference in performance of selected parents and all possible parents# When the economic value of an organism is a function of more than one characteristic, selection for a single trait may result in selection for or against or have no effect on other traits depending on the genetic correlations existing between the trait selected for and these other traits. Hazel and Lush (1942) showed that it is more efficient to base selection in every generation on an index involving all traits which affect the net merit of the organism provided each trait is given its proper weight relative to the others than to follow the plan of Improving the individual traits one at a time or the plan of improving the traits simultane- ously by the use of minimum culling levels. Heritability estimates are included in the information needed to arrive at optimum weights to be given to several traits in an index. Even in the other two methods of selection, heritability estimates would aid in properly weighting the various traits. In addition, heritability estimates are essential in determining the efficiency and choice of different breed­ ing systems (Wright, 1939). If heritability Is high for the desired characteristics, the best method will be mass selection with little use for pedigree, relatives or progeny test selection. If heritability is low, a better plan would be to make considerable use of pedigree and some use of progeny tests, (Dickerson and Hazel, 1944) and of selection on the basis of family. (c ) - Repeatability For traits which are expressed more than once by the same individual, repeatability may be defined as the regression of future performance or phenotype on past per­ formance as measured by one expression of the trait. Using previous notations, repeatability, R, Is defined such that; p < % + which amounts to the fraction of the phenotypic variance that is attibutable to constant differences between individuals This repeatable fraction of the total variance Is the portion of the superiority in selected individuals that may be ex­ pected in future performance. Thus the expected gain, p s> - 9 future performance from a single cycle of selection, measured in terms of the mean difference between the ex­ pected future performance of selected Individuals and the performance of all individuals, may be estimated in the following manner; / j (-)*£ s is again the selection differential which is defined as the mean difference in performance of selected individuals and all individuals of that population. It may be worthwhile to mention the relationship of heritability to repeatability. Since neither the genes, nor the dominance, nor epistatic deviations change duhing the individual’s lifetime, repeatability should be at least as large as heritability in the broad sense. Repeatability may be still larger because it also includes the permanent effects of environment. For exaraiple, the kinds of feeding to which calves and young heifers are subjected, do affect their production all through the rest of their lives. These effects would be included in the repeatability but they would not be heritable. Consequently repeatability is useful in setting,; an upper limit to heritability. Repeatability may not be much larger than heritability in the broad sense but it can hardly be less. Using previous notations the relationship can be represented as; R which reduces to n z r '-i + "/ *— t. ■, a t " 0 R q was assumed to be constant for this illustration. Thus it is seen that the effect of using n records is to increase genetic gain directly proportional to per cycle of selection, 1 4- — & Ps is increased by the use of n records in the same manner. Other means of increasing genetic gain are worthy of consideration. Since g s (= ) q _ t V (T by increasing q or or by reducing >gs raay p e Increased q may be increased by reducing the portion of in­ dividuals selected and/or by increasing the size of the - 12 population. The latter condition is practically of no importance except that by increasing the size of the popu­ lation the portion selected can possibl?/ be reduced. How­ ever, t ese conditions depend on the reproduction rate and longevity of the species under consideration and the state of development of the population with respect to numbers, about which breeders generally have little control. It has already been shown that N^.3. C3 +-N. •.Id 2. 28 - N...12d1 2 4 N...I3d1 3 + N...14d1A +N...15d,K -f- ± ± N.^lSd^sY -L° 14 15^ ^ 1 *• a nn » ^12 • .bg 4- 1^2 3 * «bg 4 ni 4 ..b4 + n 1 1 l.®l + n 112.°2 4 n 113*c3 + n l l l A ”lll2d 2 * n 1113 3 ^ n 1114d4 + j tt1115d 5 + n 1116d 6 + n 1117 4 year (a3 j 5 year (a4 ) 6 year (a5 ) 7 year (afi) 2 0.36 0.46 0.20 0.04 0.42 0.64 Deviation from general mean for breed Oxford (b^) Hampshire (bo) Shropshire (h^) Southdown (134) 0.94 0.13 -0.02 -1.05 Deviation from general mean for no. of Iamb3 raised. Single (Gt ) Twin (Cg) Triplet (C3 ) 0.15 0.02 -0.17 Deviation from general mean for year of records made 1934 1935 1936 1937 1938 1939 1940 1941 1942 1943 1944 1945 1946 1947 1948 1949 dl d d4 5 d6 8 d9 ) d lcN d 11 d d 12 13) d 14 ) ) d d 1^ 16) -0.151 -0.104 -0.727 -0.160 -0,583 -0.636 -0.253 -0.165 0.420 0.230 1.473 1.304 0.345 -0.071 - 0.211 -0.711 - 35 - Table VIII Summary of Analysis of Variance Showing the Percentage of Variation Source of Variation Total Total reduction p.p. s.S. 1272 2957.6 29 659.6 Direct Effects;- Age Percent of 5 total Breed Percent of Percent of total 2 6.5 0.2 15 total 259.4 8.8 total Year Percent of 3.2 3 No. of lambs raised 93.9 300.2 10.2 t-- V . W .- - '- ' '■ V v ' s +’'" ' ' ■ : V'■'■ V 'V !> :■■■■;■•k- : ■:-. ■VS-• 'S'■ .V Bag* 36 lacking In zmnbering only. ’1 *r>~ .j *■(i UNIVERSITY mOBOFZIMS £ I 'j i . ’ ...... ** " . Sift ' *vt • t'W' '*■?# , *' 1\ t‘ **«• ',**«! * '* ‘V •r ,, } • ;<->*> /-• #vV *' ■ ■•' ■-•■■■■.>: ■1 1 i: . ■',<,■ ’..ji1 '4 k< ’ '.>£ " •*' '•' • ^ .’*. !Y’.- i • •' %&%y* i .-• .“fy..■.■■'■•,fe < > .■n,' ■>.. >fS:.v. ;*t V'* * . , - 37 ESTIMATE OF REPEATABILITY (a) - Methods of Estimating Repeatability; Since repeatability (R) is defined as the regression of future performance on phenotype as measured In one expression of the trait, it may logically be estimated by the regression of the second record on the first as was demonstrated by Stewart (1945). Let (1) and (2) denote the first and second records respectively by the same Individual; then the re­ gression •coefficient is Cov. 2.2 estimates