Spontaneously Occurring Clonal Hematopoiesis in the Canine
Clonal hematopoiesis of indeterminate potential (CHIP) is a clinical entity of aging humans that is characterized by cancer-associated mutations in white blood cells, without evidence of overt neoplasia. CHIP has been associated with an increased risk of hematologic cancers, cardiovascular disease, and all-cause mortality. We hypothesized that somatic mutations in specific genes associated with human CHIP would be detectable in the blood of aged dogs not known to have hematologic disorders. DNA from paired germline and whole blood samples from 93 geriatric canine patients affected by solid cancer were subjected to targeted next generation sequencing. Impact of the variants was predicted using Polymorphism Phenotyping version 2 software (PolyPhen-2, Harvard). Clinical and demographic data were extracted from medical records. Somatic variants were detected in peripheral blood of four (4.3 %) female dogs aged 12-15 years. Affected genes were ASXL1, KIT, SF3B1, TET2, RUNX1, and PPM1D. The variant in PPM1D was a nonsense mutation, while the other five variants were single nucleotide non-synonymous variants in protein coding regions of the genes. The single nucleotide variants in KIT and SF3B1 were predicted to be benign, while the variants in ASXL1, TET2, and RUNX1 were predicted to be damaging. A mutant RUNX1 cell line was designed and constructed with CRISPR technology, and the mutant cells had an increased growth rate compared to controls. These results support the presence of variants in CHIP-associated genes in geriatric canids similar to those observed in people, and the dog represents the first species in which the genetic lesion of CHIP has been documented. Further investigations are needed to confirm the association of this genetic lesion with clinical outcomes.
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Electronic Theses & Dissertations
- Copyright Status
- In Copyright
- Material Type
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Theses
- Authors
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Sebastian, Kimberley
- Thesis Advisors
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Harrington, Bonnie
- Committee Members
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Meek, Katheryn
Lucidi, Cynthia
Magestro, Leanne
- Date
- 2022
- Subjects
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Genetics
Veterinary medicine
- Program of Study
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Comparative Medicine and Integrative Biology - Master of Science
- Degree Level
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Masters
- Language
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English
- Pages
- 65 pages
- Permalink
- https://doi.org/doi:10.25335/avmf-y583