CARDIOVASCULAR SYSTEM MODELING: ARTERIAL GROWTH AND REMODELING By Hailu Getachew Tilahun A DISSERTATION Submitted to Michigan State University in partial fulfillment of the requirements for the degree of Mechanical Engineering—Doctor of Philosophy 2017 ABSTRACT CARDIOVASCULAR SYSTEM MODELING: ARTERIAL GROWTH AND REMODELING By Hailu Getachew Tilahun Vascular systems in the human blood circulation regulate their environment when there are alterations of hemodynamic loading from homeostatic levels, depending on the magnitude and the duration of the changes. The main focus of this work is to develop a bio-chemo-mechanical model of arterial growth and remodeling wherein changes in blood pressure and flow are sustained over weeks or months. Using a two-step kinetic reaction model of collagen, which is the dominant structural protein in arteries, as a function of arterial wall stress changes, we track and evaluate the temporal change in mass deposition and degradation of extracellular matrix. We employ a constrained mixture model to capture the response of the artery to hemodynamic loadings, leading to strain energy changes that depend on the stiffness and relative mass ratio of the constituents of the artery. In so doing, we investigate the temporal changes of the geometry of the artery over weeks and months. We also explore the possible ranges of the collagen turnover rates, the coupling between collagen turnover and stresses, and the length of time it takes for the vascular stresses to return back to the steady homeostatic states while the artery is still under sustained loadings. The developed mathematical models are verified by previously published mathematical models and validated by comparing the mathematical result with animal experiments. Using reported experimental data, we inversely compute the arterial constituent mass turnover. After minimizing the total error between the simulated and experimental arterial thickness values, parameters such as collagen and smooth muscles degradation rates are estimated. The efficiency of computation is improved by singular value decomposition and regularization. We also study a lumped whole body model in the cardiovascular system with baroreflex. In this model, we incorporate the effect of arteriovenous fistula and can get verifiable results as per reported vascular maturation data. ACKNOWLEDGMENTS I would like to express my sincere appreciation to my advisor, Dr. Seungik Baek, for his kind and continuous support. I am honored to meet such a wonderful and caring person. I am also grateful for the opportunity I am given to study in the USA, for all the financial and intellectual support I got, for all safe and secure research and study environment provided by Michigan State University in general and Mechanical Engineering Department in particular. All my instructors in the graduate courses I attended are wonderful. During my research, I got a lot of helpful information from Prof. Jay Humphrey, Prof. Brain Feeny, and Prof. Abraham Engeda. My teammates in Soft Tissue Continuum Mechanics MSU-CMUQ Research Consortium are very friendly and very helpful. I benefited a lot from their readily available advice, guidance, and cooperation. Thank you! I am grateful to Prof. William F. Jackson, Dr. Jong-Eun Choi and Dr. Sara Roccabianca for their willingness to serve on my graduate committee and for their constructive feedback. Finally, I would like to express my gratitude for all the funding agencies that, directly or indirectly, supported my research, especially for generous support of National Institute of Health. iv TABLE OF CONTENTS LIST OF TABLES ............................................................................................................vi LIST OF FIGURES ......................................................................................................... vii INTRODUCTION ............................................................................................ 1 GROWTH AND REMODELING OF ARTERIES DUE TO SUSTAINED CHANGES IN HEMODYNAMIC LOADING ..................................................................... 5 Introduction .................................................................................................................. 5 Biochemical Model ..................................................................................................... 10 Biomechanical Model ................................................................................................. 11 Biochemomechanical Model ...................................................................................... 17 Simulations ................................................................................................................ 19 Result ......................................................................................................................... 23 Discussion.................................................................................................................. 31 INVERSE PROBLEM AND PARAMETER ESTIMATION ............................. 37 Introduction ................................................................................................................ 37 An Inverse Problem and Mathematical Formulation .................................................. 37 Simulation ............................................................................................................... 40 Results .................................................................................................................... 42 Parameter Estimation ................................................................................................ 43 Discussion.................................................................................................................. 46 MODELING EFFECT OF AVF ON CARDIOVASCULAR SYSTEM ............. 48 Introduction ................................................................................................................ 48 Incorporating G&R Resistance Changes into CVS .................................................... 49 AVF ............................................................................................................................ 50 CVS Model ................................................................................................................. 52 Results ....................................................................................................................... 54 Further Discussion ..................................................................................................... 60 CONCLUSION AND FUTURE WORK ......................................................... 63 REFERENCES .............................................................................................................. 65 v LIST OF TABLES Table 1. The range of biochemical parameters (𝑀𝑊: collagen molecular weight, 𝑎𝑚𝑎𝑥: collagen maximum age) ................................................................................................ 11 Table 2. Parameter Estimation of Mouse Carotid Artery ............................................... 23 Table 3. Normalized experimental arterial adaptation data from literature for changed pressure and flow .......................................................................................................... 41 Table 4. Estimated parameters using the combination of inverse problem and optimization ................................................................................................................... 45 Table 5. Reported vein and artery diameter on different days after AVF ...................... 51 Table 6. Blood flow through AVF at different days (W: Won et al86, T: Toregeani et al78) ...................................................................................................................................... 51 vi LIST OF FIGURES Figure 1. A schematic of signaling cascade in arterial wall to regulate ECM turnover and SMC tone and proliferation due to flow and pressure stimuli ................................... 7 Figure 2. A schematic of the production of collagen ....................................................... 9 Figure 3. Simplified model of collagen production ........................................................ 10 Figure 4. An idealized model for a growth and remodeling of an artery in response to perturbed hemodynamics. ............................................................................................. 20 Figure 5. Intramural pressure (mmHg) vs outer diameter (µm) for a mouse carotid artery. 30 The passive and active parameters for the arterial model were estimated from passive (* * *) and active(o o o) experiments. The fit to data with the model is shown by the solid (passive) and dashed (active) curves. ............................................................ 21 Figure 6. Flowchart indicating the solution for different variables, given pressure (P) or flow rate (Q). The Newton-Rapson iteration that is used to determine the mean radius, r, at each time step, ∆t, is the nested internal loop. .......................................................... 22 Figure 7. Variation of a) internal radius, b) arterial thickness, c)wall shear stress and d) circumferential stress for different mass coefficients for a 30% decrease in volumetric flow rate ( 𝐾𝜎𝑖 = 0 (solid line); 𝐾𝜎𝑖 = 2(broken line); 𝐾𝜎𝑖 = 6(dotted line); 𝐾𝜎𝑖 = 10(dotted-broken line) and 𝐾𝜇1𝑘 = 𝐾𝜇2𝑘 = 0.01, 𝐾𝜏𝑤𝑐 = 𝐾𝜏𝑤𝑚 = 52,𝑘𝑡𝑜𝑛 = 𝐾𝜏𝑤𝑐3, µ1 = 0.1, 𝛽2 = 0.2) ......................................................................................................... 25 Figure 8. Variation of a) internal radius, b) arterial thickness, c) wall shear stress and d) circumferential stress for a step 50% increased pressure (µ1 = 0.0, 𝛽2 = 0.001(dottedbroken line); µ1 = 0.0, 𝛽2 = 0.05(dotted line); µ1 = 0.05, 𝛽2 = 0.05(broken line); µ1 = 0.1, 𝛽2 = 0.2(solid line)) (𝐾𝜎𝑐 = 𝐾𝜎𝑚 = 2, 𝐾𝜇1𝑘 = 𝐾𝜇2𝑘 = 0.01, = 𝐾𝜏𝑤𝑐 = 𝐾𝜏𝑤𝑚 = 3𝑘𝑡𝑜𝑛 = 52) ................................................................................................................... 26 Figure 9. Variation in internal radius for one day as a function of the change in volume flow rate (from top to bottom 30%, 20%, and 10% increased volume flow rate, 10%, 20% and 30% decreased volume flow rate.) (𝐾𝜇1𝑘 = 𝐾𝜇2𝑘 = 0.01, 𝑘2𝑚 = 13.6, 𝐾𝜎𝑐 = 𝐾𝜎𝑚 = 1, 𝐾𝜏𝑤𝑐 = 𝐾𝜏𝑤𝑚 = 3𝑘2𝑚, µ1 = 0.1, 𝛽2 = 0.1) .................................................. 27 Figure 10. Variation of a) internal radius, b) arterial thickness, c) wall shear stress and d) circumferential stress for a step 30% increased flow rate (µ1 = 0.0, 𝛽2 = 0.001(dotted-broken line); µ1 = 0.0, 𝛽2 = 0.05(dotted line); µ1 = 0.05, 𝛽2 = 0.05(broken line); µ1 = 0.1,𝛽2 = 0.2(solid line)) (𝐾𝜎𝑐 = 𝐾𝜎𝑚 = 3, 𝐾𝜇1𝑘 = 𝐾𝜇2𝑘 = 0.01, 𝐾𝜏𝑤𝑐 = 𝐾𝜏𝑤𝑚 = 3𝑘𝑡𝑜𝑛 = 52) .................................................................................................... 29 vii Figure 11. Active stress (kPa) vs normalized muscle fiber stretch at different days for a) 30% decreased volume flowrate and b) 50% increased pressure (𝐾𝜎𝑐 = 𝐾𝜎𝑚 = 3, 𝐾𝜇1𝑘 = 𝐾𝜇2𝑘 = 0.01, 𝐾𝜏𝑤𝑐 = 𝐾𝜏𝑤𝑚 = 3𝑘𝑡𝑜𝑛 = 52, µ1 = 0.1, 𝛽2 = 0.2) (0 (basal)(solid line), 7(broken line), 14(dotted line) and 300 days(dotted-broken line). The circles indicate maximas for the respective curves) ...................................................... 31 Figure 12. a) Simulated changes in internal diameter (solid), ideal adaptation (diamond-dotted line) and experimental data (circles) reported by Sluijter et al. 72, b) Simulated changes in internal diameter (solid line), and experimental data (circles) reported by Friedz et al. 26 and c) corresponding thickness (simulated (solid line), experimental (circles) and ideal adaptation (diamond-dotted line)) (𝐾𝜎𝑐 = 𝐾𝜎𝑚 = 3, 𝐾𝜇1𝑘 = 𝐾𝜇2𝑘 = 0.01, 𝐾𝜏𝑤𝑐 = 𝐾𝜏𝑤𝑚 = 3𝑘𝑡𝑜𝑛 = 52, µ1 = 0.1, 𝛽2 = 0.2). .................... 34 Figure 13. Comparison of inverse solution (solid line) with ideal thickness ratio (i.e. ℎℎℎ = 𝑃𝑃ℎ)(broken) ...................................................................................................... 43 Figure 14. Flow chart for parameter estimation using inverse solution ......................... 44 Figure 15. Comparison of two inverse solutions (Figure 13 (solid line), simulation using optimized parameters (broken line)) with ideal thickness ratio (assuming flow is homeostatic (dotted line)) and experimental thickness ratio (circles) ............................ 46 Figure 16. Cardiovascular System.81 The main cardiovascular elements are 𝐶compliance, 𝑅- resistance and 𝐿- inertance;................................................................. 53 Figure 17. Mean pressure in systemic arteries (a) and skeletal muscle mean flow (b) under different regulation, pressure, and blood resistance. (0-30 sec: circulation without baroreflex, 30-300 sec: circulation with baroreflex, 60-70 sec: 50% reduced systemic arteries pressure, 100-110 sec: 50% increased systemic arteries pressure, 150-200 sec: 30% reduced skeletal muscle bed resistance, 200-250 sec: 70% reduced skeletal muscle bed resistance) ................................................................................................. 55 Figure 18. Cardiac load: left ventricle (lv) P-V curves for baseline (solid line), 30% reduced (broken line) and 70% reduced (dotted line) skeletal vascular bed resistance 57 Figure 19. Blood flow through lower arm AVF, simulation (solid line)vs data from literature (Toregeani et al.78 (circle), Lomonte et al. 51(diamond)) ................................. 58 Figure 20. Flow through upper arm AVF, simulation (solid line) vs data from Toregeani et al.78(circles) ............................................................................................................... 58 Figure 21. Heart rate (a) and Cardiac output (b) for variable access flow (simulation (solid line), data from literature9 (circles)) ...................................................................... 59 viii Figure 22. P-V curve in left ventricle (baseline (solid line); 50% increased mean pressure in systemic arteries (broken line); 50% increased pressure and 50% reduced vascular compliance (triangle-dotted line); 50% increased pressure, 50% reduced vascular compliance and 50% reduced baroreceptor sensitivity (i.e. 𝑐𝑛3 = 0.5 in Eq. (40)) (circles-dotted line)) .............................................................................................. 62 ix INTRODUCTION According to World Health Organization Global Health Estimates 2015, 31 percent of all deaths worldwide are due to cardiovascular diseases.89 The significant portion of these diseases like hypertension, ischemia, and stroke are related to variations in hemodynamics. There is, therefore, a huge interest to study the coupling between the hemodynamic perturbations and cardiovascular adaptations. For example, many animal experiments are conducted to study the short term and long term effects of high blood pressure on arteries. Mathematical models and simulations are also carried out to predict the cardiac and vascular spatiotemporal changes under different hemodynamic conditions. In the cardiovascular system (CVS), perturbations in blood flow from homeostatic levels may occur due to various reasons. In most cases, these perturbations last for short durations, from few seconds to few days, and their effect may not show adverse results in maladaptation. These perturbations are usually corrected by various autoregulation in the system, such as myogenic effect, coronary autoregulation, cerebral autoregulation and renal autoregulation.43 22 In some cases, though, the perturbations become chronic and result in significant changes in the CVS and the final consequence could be fatal.40 In the first part of this research, we model adaptation of soft tissues, especially arteries, to chronic changes in blood pressure and flow. Over the past decade, researchers have developed various computational models of arterial adaptation in physiological and pathological conditions (like hypertension82, vasospasm7, and aneurysm6) based on constrained mixture approach and successfully described and predicted these 1 adaptations over relatively longer periods (months to years) by assuming mass generation of constituents as functions of stresses. On the other hand, although there are various experiments over shorter duration (days to weeks) in animal experiments,73 58 there is no mathematical model that is capable of capturing the time course of vascular adaptation -- the turnover rates of the constituents connecting them with the final vascular mass and volume changes—during the relatively short period (days to months) compared to the previous models, which is important for predicting the short period adaptation of the arteries in medical and clinical problems such as deploying stenting and post-surgery of artiovenous fistula. One of the major structural constituent in arteries and that plays a key role in the maintenance of tissue integrity is collagen.60 Hence, we incorporate collagen turnover rate in the form of biochemical models to previous mechanical models. The dynamic turnover of collagen in the artery (due to pressure and flow perturbations) is, however, not well understood, since it involves complex chemo-mechano-biological pathways. Therefore, a central main objective of this study is to model the turnover of collagen in three stages: the subcellular synthesis of procollagen, the transition from the intermediate state of self-assembled microfibrils to matured cross-link, and the collagen removal that is regulated by wall tension. The collagen turnover dynamics is combined with constrained mixture model in which vascular walls are assumed to be made up of different constituents. Mixture theory allows tracking the production and removal of individual constituents, while still assuming the constituents of the mixture move together. It also allows the constituents to have distinct sets of evolving natural configurations. This approach has been already shown to be a useful tool to simulate arterial adaptations to changes in flow, pressure and axial stretch. 31 2 32 The collagen reaction kinetics within a constrained mixture theory enables us to study the possible ranges of kinetic parameters (turnover rates) in collagen synthesis and degradation. For a given change in hemodynamic loading (pressure or flow changes), we can also determine the resulting variation in arterial geometry and stress distribution by forward iterative approaches (like Newton-Raphson). The second objective of this research is developing an alternative parameter estimation by using experimental reports in the literature. Instead of forward iterative approaches, we inversely predict the mass turnover from the measured dimension of the artery, the reported hemodynamic change, and the mixture model. We employ orthogonalization and regularization to improve the computational efficiency. Comparing the predicted and measured dimensions, we use an optimization algorithm to compute some of the (observable) parameters like muscle tone and shear stress coupling, collagen degradation and smooth muscle cell degradation rates. Finally, our research aims to expand our computational model toward the whole body CVS. We have two goals in doing so. First, using lumped model (as opposed to 3-D models), it is possible to study the coupling between local temporal changes in the arteries and the corresponding changes in cardiovascular circulation. Geometrical adaptation of the arteries due to variations in blood pressure and flow modifies other mechanical properties like arterial compliance, stiffness, and resistance to blood flow. The latter properties intern influence blood circulation parameters like the energy absorption character of the arteries, sensing of pressure and cardiac load. Second, patient-specific diagnostic data can be combined with CVS model and the resulting simulation data may either complement the data from medical devices or predict hard to measure, yet critical, 3 cardiovascular elements. For instance, vascular and physiologic measurements from arteriovenous fistula in dialysis patients can be better analyzed after combining with CVS model. The short term and long term effects of various chemical and mechanical stimuli, like a concussion and air pollution, on cardiovascular circulation can also be investigated. 4 GROWTH AND REMODELING OF ARTERIES DUE TO SUSTAINED CHANGES IN HEMODYNAMIC LOADING Introduction In the CVS, frequent, short-lived hemodynamic perturbations may occur due to various causes. Autoregulation, at different levels, in CVS minimizes the effect of the perturbations so that the cells in the vascular walls function at homeostatic conditions. For example, if blood pressure is increased, Bayliss myogenic response causes the blood vessel to constrict. 10 But some hemodynamic loading changes, like hypertension and hyper-perfusion, last longer. The CVS has to adapt to such sustained changes if the working environment of vascular cells is to be preserved. The adaptation involves functional and structural changes of CVS elements. In this research, we focus on investigating structural change (or growth and remodeling (G&R)) of arteries under sustained blood pressure or flow changes. The main structural constituents of arterial wall are an extracellular matrix (ECM) and smooth muscle cells (SMCs). ECM is composed of elastin, collagen, and many other proteins. During G&R, vascular growth involves increasing vascular mass (in the form of deposition of collagen, smooth muscle cells proliferation), whereas the remodeling involves a change in orientation of collagen families, non-uniform growth, change in the proportion of constituents or cell migration. The constituent’s turnover is affected by various stimuli such as diseases, injury or mechanical load; and the individual constituents have different half-lives. Elastin has a longer half-life (about 50 years) and slower turnover rate, as slow as 1% per year.84 On the other hand, collagen has a normal half-life close to 70 days. Its turnover plays a significant role in maintaining the arterial 5 integrity and in G&R due to hemodynamic loads.40 Differences between the rates of synthesis and degradation of collagen can lead to fibrosis (as in aging or hypertension) or weakening of the wall (as in dissection or rupture). There is, therefore, strong interest to evaluate temporal imbalances in collagen turnover. 54 21 15 12 20 73 The common mechanical stimuli in the cardiovascular circulation are blood pressure and flow. Corresponding to these stimuli, there are various signaling pathways in the arterial wall. The main pathways are sketched in Figure 1. Perturbation in blood flow rate changes arterial wall shear stress. The shear stress is sensed by endothelial cells which then produce vasoactive molecules. The latter molecules modify the tone and the turnover of SMCs. Increased flow increases shear stress and upregulates endothelialderived nitric oxide synthase, which catalyzes the synthesis and secretion of nitric oxide (NO). NO activates soluble guanylate cyclase and increases cyclic guanosine monophosphate (cGMP), which relaxes the contractile apparatus and results in vasodilation.59 52 43 NO also inhibits proliferation of SMCs.80 17 27 Reduced flow reduces shear stress and enhances the secretion of endothelin-1 (ET-1), which causes SMCs contraction and vasoconstriction.47 ET-1 induces SMCs proliferation.50 SMCs production of collagen appears to be attenuated by NO 46and augmented by ET-1.67 ECM carries stretch and stress due to pressure. Adhesion junctions and adhesion molecules, such as integrin, transfer stresses and strains to the cytoskeleton (actin filaments) in the cells. 19 49 88 87 Transient receptor potential channels (TRPC6) play an essential role in the regulation of myogenic tone.85 Increased wall stress enhances SMCs production of ECM such as collagen.68 If the increased pressure persists for days and weeks, arterial mass increases due to deposition of collagen and other ECM proteins both 6 in the media and adventia.24 12 Excess stretch could also suppress matrix metalloproteinase (MMP) production and reduce collagen degradation.53 Blood Flow Q low shear stress Flow induced high shear stress MMP ECs [ ET-1] [NO] relaxation contraction synthesis high tension Pressure induced synthesis SMCs ECM MMP Figure 1. A schematic of signaling cascade in arterial wall to regulate ECM turnover and SMC tone and proliferation due to flow and pressure stimuli The mechanotransduction signals, by which the cells mechano-sense and mechanoregulate the ECM, are complex. The ECM turnover regulation sites are gene transcription, post-translational modification, secretion, and assembly. The synthesis, deposition, and degradation of collagen type I are shown in Figure 2. Mechanical stimuli followed by mechanotransduction upregulates collagen genes (COL1A1, COL1A2). α-helix mRNAs are transcribed in the nucleus and transported to cytoplasmic ribosomes.48 62 11 Thousands of amino acids (glycine (G) and others) are sequenced in (G-X-Y)n motif and form α-chains within about seven minutes. In about eight minutes, three α-chains (two 7 α1(I) and one α2(I) chains) are combined to form procollagen helix in the Golgi apparatus. 10-50% procollagen is degraded inside the cell.57 69 The remaining procollagen is packed in vesicles, transported to the cell membrane and secreted in about 20 min. Procollagen changes to tropocollagen in extracellular space after losing propeptides. Tropocollagen aggregates form within about 20 min.28 Tropocollagen self-assemble and form microfibrils. 3-10% of microfibrils degrade.74 The remaining microfibrils cross-link 1-8% per day and form fibrillar collagen. 61 The cross-linking continues as the collagen matures. It takes from 3 hours to 24 hours for mature collagen to form.55 Though cross-linking occurs quickly, the degree of cross-linking could change over time as the fibers mature. Degradation half-life of mature collagen fibers is from 50 days to 100 days.63 degradation could occur via intracellular phagocytotic ingestion 25 The or extracellular pathway. MMPs are the major class of enzymes that degrade collagen.18 8 29 a-helix mRNA Reactive a-helices Intracellular procollagen (mp) 10 min - 60 min (Folding) Triple-helix procollagen 3 hr -24 hr (Mature collagen formation) 1-β1 Secretion Degrade (10 -50 %) β1 Tropocollagen Collagen in intermediate state (CI) Microfibrils Cross-link formation Fibrillar collagen (reducible) β2 µ1 Degrade (3-10% per day) Cross-linked collagen (CF) Mature collagen (irreducible) µ2 Degradation Extracellular space ½ hr-2 hr (Exocytosis of procollagen) Synthesis of procollagen a-molecules Intracellular space ~7 min ( Pro-Chain) Degrade (Half-life: 50 – 200 days ) Simplified Process Figure 2. A schematic of the production of collagen In general, we observe that there are multiple time scales in the G&R of arteries in response to hydrodynamic loading starting from very fast myogenic effect, to vasodilation that occurs within minutes of increased flow4, to acute changes for sustained hydrodynamic loading (days to weeks) and to chronic adaptation (weeks to months). Although the signaling cascades and the turnover of arterial constituents are well studied, the detailed kinetics models and specific ranges of reaction rates are still lacking. Rather than developing a detailed reaction model, with many yet unknown parameters, we lumped the turnover of collagen into three major categories as shown in the right part of Figure 2. The extracellular collagen is classified into an intermediate state, which 9 represents self-assembled micro-fibrils, and a final state, which represents fibrillary collagen with mature cross-links. In the next sections, we will develop the mathematical model for the simplified synthesis and degradation of collagen, and incorporate into the constrained mixture model. Biochemical Model Stress A simplified process of collagen synthesis and degradation is sketched in Figure 3. β1 Collagen in the intermediate state, CI β2 Cross-Linked Collagen, CF µ2 mp µ1 Cell, Degradation to other molecules Figure 3. Simplified model of collagen production Similar to the work of Niedermuller et al.61, we consider first-order reactions, with an initial supply 𝑚𝑝 scaled by 𝛽1 (fraction of procollagen that is released to the extracellular space), a conversion from intermediate to final parameterized by rate 𝛽2, and degradation in each 10 of the two extracellular states parameterized by rates 𝜇1 and µ2 , respectively. The governing equations are given us 𝜕𝐶𝐼 𝜕𝑡 𝜕𝐶𝐹 𝜕𝑡 (1) = 𝛽1 𝑚𝑝 − (𝛽2 + 𝜇1 )𝐶𝐼 , (2) = 𝛽2 𝐶𝐼 − 𝜇2 𝐶𝐹 , where 𝐶𝐼 and 𝐶𝐹 are the molar concentrations of intermediate and cross-linked matured collagen. Values of 𝛽1, 𝛽2, 𝜇1 , and 𝜇2 with their corresponding references are summarized in Table 1. Measurement of collagen turnover without considering reutilization of isotopic precursors used to label the collagen can result in longer than actual turnover times 75 48, hence actual rates may be larger than the values indicated in Table 1. The mean age of 1 the mature collagen is thus given by 𝑎𝑚𝑒𝑎𝑛 = 𝜇 = 100 day, with 𝜇2 constant (0.01 day-1). 2 Table 1. The range of biochemical parameters (𝑀𝑊: collagen molecular weight, 𝑎𝑚𝑎𝑥 : collagen maximum age) Para. 𝛽1 𝛽2 𝜇1 𝜇2 𝑀𝑊 𝑎𝑚𝑎𝑥 Mouse Carotid Artery30 0.5 -0.9 0.01-0.2 0.03-0.1 0.01-0.02 4.981617x10-22 350 Units Reference 11 day-1 day-1 day-1 kg day 61,48, 75 61 29 2 63,29 Biomechanical Model Changes in blood flow and/or pressure under physiologic conditions alter arterial wall stresses modestly (e.g., wall shear stress, circumferential, and axial wall stress), which yet can change the gene expression profile of the vascular wall cells (e.g., endothelial, smooth muscle, and fibroblasts) and lead to changes in muscle tone and, if sustained, 11 matrix turnover. Such changes allow the vessel to adapt, which is often homeostatic if the perturbations are modest.39 For a normal artery in humans, wall shear stress and circumferential stress tend to be maintained at certain levels, ~1.5 Pa for the mean wall shear stress4 and ~150 kPa for the mean circumferential stress26. Stress analyses that include residual stress, basal smooth muscle tone, and nonlinear wall properties suggest that the distribution of circumferential and axial wall stress tend to be uniform across the wall in normalcy.40 The mean values of stress are given by: 𝑓 𝜎1 = 𝜋ℎ(2𝑟1 +ℎ), 𝑖 𝜎2 = 𝑃𝑟𝑖 ℎ 𝜏𝑤 = , 4𝜇𝑄 𝜋𝑟𝑖3 , (3) where 𝑓1 , 𝑃, and 𝑄 are the axial force, transmural pressure, and volumetric flow rate; 𝑟𝑖 and ℎ are the inner radius and thickness of the artery; 𝜇 is the viscosity of the blood; and 𝜏𝑤 is the wall shear stress whereas 𝜎1 , 𝜎2 are the axial and circumferential stresses, respectively. The continuum theory of mixtures is particularly well suited for describing the behavior of arteries38, though it is currently not possible to capture the chemical or mechanical contributions of all of the extracellular matrix components (there are on the order of 100 different proteins, glycoproteins, and glycosaminoglycans within the arterial wall). Hence, we focus on the three primary structurally significant constituents: elastic fibers, collagen fibers, and smooth muscle cells.42,38 The actual complexity of arterial mechanobiology, in view of the large number of constituents that could be tracked, necessitates judicious choices that will allow us to capture the salient responses of the mixture by following only the key constituents. Thus, let material properties at each place 𝒙(𝑡) in the mixture 12 configuration 𝜅𝑡 (𝐵) be modeled by assuming that, in a homogenized sense, multiple constituents co-exist within local neighborhoods and at each time t. We denote constituents SMCs, collagen fibers (using a 4-fiber model with angle α) and elastin via 𝑖 𝜖 [𝑚, 𝑘, 𝑒], but we assume the same mechanical properties for multiple families of locally parallel collagen fibers 𝑘 𝜖 [𝑐1 , 𝑐2 , 𝑐3 , 𝑐3′ ]. Following Baek et al.7 and Valentin et al.82, let the deformation of the ith constituent that was produced at time 𝜏, be described by the linear transformation 𝑭𝑖𝑛(𝜏) (𝑡): 𝑭𝑖𝑛(𝜏) (𝑡) = 𝑭(𝑡)𝑭(𝜏)−1 𝑮𝑖ℎ (𝜏). (4) 𝑭(𝑡)is 𝑑𝑖𝑎𝑔[𝜆1 (𝑡), 𝜆2 (𝑡)] where 𝜆1 (𝑡) = 𝑙(𝑡)⁄𝑙ℎ and 𝜆2 (𝑡) = 𝑟(𝑡)⁄𝑟ℎ . 𝑮𝑖ℎ (𝜏) is the deposition stretch matrix. 𝑭𝑖𝑛(𝜏) transforms vectors that belong to the tangent space at 𝒙𝑛(𝜏) 𝜖 𝜅𝑛(𝜏) (𝐵) to the tangent space at the point 𝒙 𝜖 𝜅𝑡 (𝐵) for the 𝑖 𝑡ℎ constituent that was produced at time 𝜏 ≤ 𝑡. Again following prior work, the strain energy is given as 𝑡 𝑤 𝑖 (𝑡) = ∫𝑡−𝑎𝑖 𝑚𝑎𝑥 𝑚𝑅𝑖 (𝑡, 𝜏)𝑞 𝑖 (𝑡, 𝜏)Ψ𝑖 (𝑭𝑖𝑛(𝜏) (𝑡))𝑑𝜏, (5) 𝑖 where 𝑚𝑅𝑖 (𝑡, 𝜏)>0 is newly produced constituent 𝑖 at time 𝜏, 𝑎𝑚𝑎𝑥 is the maximum age of constituent 𝑖. Notice that any quantity that is denoted by (∙)𝑅 is expressed in the fixed reference configuration. 𝑞 𝑖 (𝑡, 𝜏) ∈ [0,1] is the fraction of constituent 𝑖 that is produced at time 𝜏 and survives to time 𝑡. It is inspired by population dynamics76 and could be expressed as 𝑡 (6) 𝑞 𝑖 (𝑡, 𝜏) = 𝑒𝑥𝑝 (− ∫𝜏 𝜇2𝑖 (𝑠)𝑑𝑠), 13 𝑚𝑅𝑖 (𝑡, 𝜏) and 𝜇2𝑖 (𝑠) will be derived in the next section. Finally, Ψ𝑖 (𝑭𝑖𝑛(𝜏) (𝑡))is the strain energy of a constituent 𝑖 per unit mass and it is computed via Ψ𝑚 = 𝑐1𝑚 2 2 2 𝑚 ((𝜆𝑚 𝑛,1 ) + (𝜆𝑛,2 ) + 𝑐𝑐 2 𝑐𝑚 1 2 𝑚 (𝜆𝑚 𝑛,1 ) (𝜆𝑛,2 ) 2 2 2 − 3) + 4𝑐2𝑚 (𝑒𝑥𝑝 (𝑐3𝑚 ((𝜆𝑚 𝑛,2 ) − 1) ) − 1), (7) 3 2 (8) Ψ𝑘 = 4𝑐2𝑐 (𝑒𝑥𝑝 (𝑐3𝑐 ((𝜆𝑘𝑛,2 ) − 1) ) − 1), 3 Ψ𝑒 = 𝑐1𝑒 2 2 2 ((𝜆𝑒𝑛,1 ) + (𝜆𝑒𝑛,2 ) + 1 2 2 (𝜆𝑒𝑛,1 ) (𝜆𝑒𝑛,2 ) − 3). (9) 𝜆𝑖𝑛 is the stretch of constituent 𝑖 from its natural to the current configuration and derived from Eq.(4). Multiple families of collagen fibers are defined by their present different fiber alignments. Let 𝒚𝒌 (𝜏) be a unit vector in the direction of the kth collagen fiber family that was produced at time v. Let the angle between𝒚𝒌 (𝜏) and the first principal direction at time τ be denoted by 𝜶𝒌 (𝜏). The unit vector 𝒀𝒌 (𝜏) in the reference configuration that corresponds to 𝒚𝒌 (𝜏) is: 𝑭(𝜏)−1 𝒚𝑘 (𝜏) 𝒀𝑘 (𝜏) = |𝑭(𝜏)−1 𝒚𝑘 (𝜏)|. (10) The stretch in the fiber direction from the reference to the current configuration is thus: 1/2 𝜆𝑘 (𝑡) = (𝑭(𝑡)𝒀𝑘 (𝜏). 𝑭(𝑡)𝒀𝑘 (𝜏)) (11) , and the stretch of the collagen fiber from its natural to the current configuration is given by 14 𝜆𝑘 (𝑡) 𝜆𝑘𝑛(𝜏) (𝑡) = 𝐺ℎ𝑐 𝜆𝑘 (𝜏), (12) where 𝐺ℎ𝑐 is a homeostatic value of the deposition stretch (i.e. assuming collagen fibers are always deposited at the same stretch), and 𝜆𝑘 (𝜏) is stretch of the unit vector in the fiber direction in the reference configuration relative to the configuration at time 𝜏. A similar approach can be adopted for smooth muscle cells, which are mainly in the circumferential direction. The homeostatic deposition of smooth muscle is assumed to be 𝑮𝒄𝒉 = 𝐺ℎ𝑐 𝑰. For elastin, which is thought to be distributed isotropically, the homeostatic deposition is assumed to be 𝐺ℎ𝑒 = 𝐺ℎ𝑒 𝐼. Because the cross-linked elastin is synthesized primarily at early stages of development, it is difficult to trace its production time. We ̃ 𝒆 = 𝑭−𝟏 (𝑣)𝑮𝒆𝒉 = diag(𝐺̃1𝑒 , 𝐺̃2𝑒 ) which represents a mapping from the define a new tensor 𝑮 natural configuration of elastin to the reference configuration. Note that 𝐺̃ 𝑒 is not a deposition stretch tensor for elastin, whereas 𝐺ℎ𝑐 and 𝐺ℎ𝑚 are deposition stretches for 𝑒 collagen and smooth muscle, resp., and 𝐹𝑛(𝑣) = 𝐹(𝑡)𝐺̃ 𝑒 . Because newly produced material could have a different material symmetry than that which is in place, the material properties of Ψ𝑖 can change with time. The newly produced material depends on the stress and the history of the deformation. The constitutive relation for the Cauchy membrane stress (force per deformed length) is: 1 𝜕𝑤 (13) 𝑻 = 𝐽 𝑭 𝜕𝑭𝑇 , 15 1 𝜕𝑤 which gives: 𝑇11 = 𝜆 2 𝜕𝜆1 1 𝜕𝑤 , 𝑇22 = 𝜆 1 𝜕𝜆2 and 𝐽 = 𝜆1 𝜆2. Denoting the membrane stress due to vascular smooth muscle tone by 𝑻𝑎𝑐𝑡 , the total Cauchy membrane stress of a vasoactive vessel is assumed to be: 𝑻 = 𝑻𝑝𝑎𝑠𝑠 + 𝑻𝑎𝑐𝑡 , (14) where 𝑻𝑝𝑎𝑠𝑠 is the passive Cauchy membrane stress and 𝑻𝑎𝑐𝑡 is computed from: 66,34 𝑎𝑐𝑡 𝑻𝑎𝑐𝑡 = 𝑆𝜆𝑎𝑐𝑡 2 𝑓(𝜆2 )𝒆2 ⨂𝒆2 , (15) 𝑀𝑚 (𝑡) 𝜏 (𝑡) 𝑆(𝑡) = 2𝑆𝑏𝑎𝑠𝑎𝑙 𝑀𝑅𝑚 (0) (1 + tanh (−𝑘𝑡𝑜𝑛 ( 𝜏𝑤 𝑤ℎ 𝑅 𝑓(𝜆𝑎𝑐𝑡 2 )= 1−( − 1) − Ln(3) 2 )), 𝜆𝑀 −𝜆𝑎𝑐𝑡 2 )2 , 𝜆𝑀 −𝜆0 (16) (17) where 𝑆𝑏𝑎𝑠𝑎𝑙 is the basal vasoactive tone,𝑀𝑅𝑚 is the total mass of SMCs, 𝑘𝑡𝑜𝑛 is scaling constant and𝜏𝑤ℎ homeostatic wall shear stress. Moreover 𝜆𝑀 and 𝜆0 are the stretches at which the contraction is maximum and zero, respectively, and 𝜆𝑎𝑐𝑡 is an active stretch 2 that is computed from:7 𝑑𝑟 𝑎𝑐𝑡 𝑑𝑡 𝑟 (18) = 𝐾𝑎𝑐𝑡 (𝑟 − 𝑟 𝑎𝑐𝑡 ), 𝜆𝑎𝑐𝑡 2 = 𝑟 𝑎𝑐𝑡 where 𝑟 is the mean radius, with 𝐾𝑎𝑐𝑡 is constant. The normal Cauchy stress equations in Eq.(3) can be re-written as: 𝜎1 = 𝑇11 ℎ , 𝜎2 = 𝑎𝑐𝑡 𝑇22 +𝑆𝜆𝑎𝑐𝑡 2 𝑓(𝜆2 ) ℎ 16 . (19) Biochemomechanical Model To integrate the biochemical model into the biochemical-mechanical model, we have to use a common computational configuration. A fixed reference configuration 𝜅𝑅 (𝐵) (at reference position X) is utilized and mapped to configurations (e.g., 𝜅𝑡 (𝐵), in vivo configuration) at different times during the G&R. The use of fixed-reference configuration allows us to use the material description in modeling kinetics of mass and strain energy without considering the volume and area changes. We let the synthesis rate of intracellular procollagen and proliferation of SMCs 𝑚𝑝𝑅 (t) (Eq (1) ) be given by a stress-dependent scalar function depending on time t. We also consider different rates of collagen production by the two primary cell types, fibroblasts in the adventitia and smooth muscle cells in the media: 𝑘 (𝑡) 𝑚𝑝𝑅 = 𝑐 (𝑡) 𝑀𝑅 (𝐾𝜎𝑐 𝑐 𝑀𝑅 (0) 𝜎𝑘 (𝑡) ( 𝜎ℎ 𝜏𝑤 (𝑡) − 1) − 𝐾𝜏𝑐𝑤 ( 𝜏𝑤ℎ − 1) + 𝑚𝑝𝑘 (0)), (20) 𝑘 where 𝜎ℎ is homeostatic normal stress, and 𝐾𝜎 and 𝐾𝜏𝑤 are gain-type parameters; 𝑚𝑝𝑅 (𝑡) is procollagen mass turnover and 𝑀𝑅𝑐 (𝑡) is collagen mass. 𝑘 𝑘 After the synthesis of 𝑚𝑝𝑅 (𝑡), the change of intermediate collagen, 𝐶𝐼𝑅 , is given by a differential equation (Euler method at each time step ), 𝑘 𝑑𝐶𝐼𝑅 (𝑡) 𝑑𝑡 (21) 𝑘 (𝑡) 𝑘 (𝑡). = 𝛽1 𝑚𝑝𝑅 − (𝛽2 + 𝜇1 )𝐶𝐼𝑅 In order to utilize the reaction equations from intermediate to mature collagen for arterial mechanics, we consider the production of matured collagen, meaning by converting from 17 the intermediate collagen, which is soluble, to the cross-linked collagen fiber, k, where the mass production rate 𝑚𝑅𝑘 (𝜏) at the production time τ, given by (22) 𝑚𝑅𝑘 (𝜏) = (𝑀𝑊)𝑐 𝛽2 𝐶𝐼𝑅 (𝜏), where 𝑀𝑊 𝑐 is the molecular weight of collagen. Written in this way, information from the ‘reaction kinetics’ can be incorporated directly within the mixture formulation, thus providing additional guidance on reasonable constitutive relations for constituent production and removal. The mass of matured cross-linked collagen fiber family 𝑘 (and the total mass of collagen, 𝑐) per unit reference area is given by 𝑡 𝑀𝑅𝑘 (𝑡) = ∫𝑡−𝑎 𝑚𝑎𝑥 𝑚𝑅𝑘 (𝜏)𝑞 𝑘 (𝑡, 𝜏)𝑑𝜏, 𝑀𝑅𝑐 (𝑡) = ∑4𝑘=1 𝑀𝑅𝑘 (𝑡). (23) The scalar measure of wall stress and thickness in the collagenous fiber families are given by: 𝜎 𝑘 (𝑡) = 𝑀𝑐 (𝑡) |𝑻𝑐 𝒚𝑘 (𝑡)| ℎ𝑐 (𝑡) ℎ𝑐 (𝑡) = (1−∅ 𝑅)𝜌𝜆 , 𝑓 1 𝜆2 , (24) where 𝑻𝑐 = ∑𝑘 𝑻𝑘 , 𝒚𝑘 is unit vector in the direction of collagen family 𝑘, ∅𝑓 is the mass fraction of fluid in the vessel (70%). Although the relative percentages and mechanical properties of elastin and collagen change with age70, we consider adaptations that occur over much shorter time scales. Hence, we take the baseline state as homeostatic. The rate of degradation 𝜇2𝑖 (𝑡) can be given as a constitutive function of stress. It is also related to the relative tension of collagen fiber k, as, for example: (25) 𝑘 𝑘 (𝜁 𝑘 𝜇2𝑘 (𝑡) = 𝐾𝜇1 + 𝐾𝜇2 (𝑡) − 𝜁𝑐𝑘 )2 , 18 𝜁 𝑘 (𝑡) = 𝜕𝑤𝑘 (𝜆𝑘 𝑛(𝜏) (𝑡)) 𝜕𝜆𝑘 𝑛(𝜏) 𝜕𝑤𝑘 (𝐺ℎ𝑘 ) 𝜕𝜆𝑘 𝑛(𝜏) (26) . In this work, we assume that a soft tissue has been in a homeostatic state for a long time until 𝑡 = 0. Thus, the condition for a steady state for 𝑘 𝑡ℎ collagen family in a tissue is (from 𝑘 Eq. (1), (2) and (22)), and observing that 𝑀𝑅𝑘 (𝑡) = (𝑀𝑊)𝑐 𝐶𝐹𝑅 (𝑡), 𝑚𝑅𝑘 (0) = 𝑚ℎ𝑘 = 𝜇2𝑘 𝑀𝑅𝑘 (0), 1 𝑘 (0) 𝐶𝐼𝑅 = (𝛽 𝑐 ) 𝑘 (0) 𝜇2𝑘 𝑀𝑅 (𝑀𝑊)𝑐 2 (28) , 𝑘 (0) 𝛽 𝑐 +𝜇 𝑐 𝜇2𝑘 𝑀𝑅 𝑚𝑝𝑘 (0) = ( 𝛽2𝑐𝛽𝑐1 ) 1 2 (27) (𝑀𝑊)𝑐 (29) . Similarly, SMCs mass will be computed from, 𝑀𝑚 (𝑡) 𝑚𝑅𝑚 (𝑡, 𝜏) = 𝑀𝑅𝑚 (0) (𝐾𝜎𝑚 ( 𝜎𝑚 (𝜏) 𝑅 𝜎ℎ 𝜏 (𝜏) − 1) − 𝐾𝜏𝑚𝑤 ( 𝜏𝑤 𝑤ℎ (30) − 1) + 𝑚𝑅𝑚 (0)), where 𝑚𝑅𝑚 (𝑡, 𝜏) is the turnover rate of SMCs and 𝑀𝑅𝑚 (𝑡) is to total mass of SMCs at time t. The rate of loss of smooth muscle cells (apoptosis) is assumed to be constant, 𝜇2𝑚 = 𝑚 𝐾𝜇1 = 0.01 𝑑𝑎𝑦 −1. Similar to Eq.(27), 𝑚𝑅𝑚 (0) = 𝜇2𝑚 𝑀𝑅𝑚 (0). The scalar measure of the stress is set to: 𝜎 𝑚 (𝑡) = 𝑎𝑐𝑡 𝑇22 +𝑆𝜆𝑎𝑐𝑡 2 𝑓(𝜆2 ) ℎ𝑚 𝑀𝑚 (𝑡) ℎ𝑚 (𝑡) = (1−∅𝑓𝑅)𝜌𝜆 , 1 𝜆2 . (31) Simulations It has been shown previously that 2D (i.e., membrane) models can capture many salient features of arterial G&R33,34, hence we use the same approach here. Homeostatic dimensions (wall thickness,ℎℎ , diameter, 𝐷ℎ ) 19 and corresponding stresses (circumferential, 𝜎ℎ , and wall shear, 𝜏𝑤ℎ ) change when the homeostatic pressure, 𝑃ℎ , or volumetric flow rate, 𝑄ℎ , are perturbed from homeostatic levels. Depending on the duration(∆𝑡) and magnitude of the perturbations (𝛿𝑃 or 𝛿𝑄), the vascular dimensions (𝐷(𝑡), ℎ(𝑡)) and stresses (𝜎(𝑡), 𝜏𝑤 (𝑡)) evolve in time (Figure 4). D (t) is measured D(t0) P(t0) + δP(t0+∆t) Q(t0) + δQ(t0+∆t) P(t0) + δP(t0) Q(t0) + δQ (t0) h(t0) h(t) is measured ∆t Figure 4. An idealized model for a growth and remodeling of an artery in response to perturbed hemodynamics. Parameters used in the simulation are listed in Table 2. The homeostatic mass fractions 𝑘 𝑓 (∅𝑒0 , ∅𝑚 0 , ∅ , ∅0 ), dimensions (roh, hh, 𝛼ℎ ), stresses (𝜎ℎ , 𝜏ℎ ), pressure (𝑃ℎ ), parameters for the strain energy ( 𝐺ℎ𝑐 , 𝐺ℎ𝑚 , 𝐺1𝑒 , 𝐺2𝑒 , 𝑐1𝑒 , 𝑐2𝑐 , 𝑐3𝑐 , 𝑐1𝑚 , 𝑐2𝑚 , 𝑐3𝑚 ) and smooth muscle tone (𝜆𝑀 , 𝜆0 , 𝑆𝑏𝑎𝑠𝑎𝑙 ) are determined by optimization and curve fitting to a mouse carotid artery data. 30 Letting all material and biochemical parameters be the same for the four collagen fiber families, Figure 5. shows optimization results for intramural pressure vs. outer diameter. Then, assuming that blood pressure and volumetric flow are independent input variables, the artery is assumed to be in the homeostatic state at and before 𝑡 = 0; this state is then perturbed by either changing the pressure or the flow from arterial homeostatic values. 20 We then compute changes in the other arterial parameters as the time progresses. Using Eq. (13) and (14), the mean blood pressure and circumferential membrane stress for a vasoactive vessel are calculated from the equilibrium equation in the circumferential direction: (32) 𝑎𝑐𝑡 𝑃𝑟 = 𝑇22 + 𝑆𝜆𝑎𝑐𝑡 2 𝑓(𝜆2 ), where pressure (𝑃) is assumed to be known. After each time step (𝑡 + Δ𝑡), we determine the radius using Newton-Rephson iteration, where the solution procedure is shown in Figure 6. Figure 5. Intramural pressure (mmHg) vs outer diameter (µm) for a mouse carotid artery. 30 The passive and active parameters for the arterial model were estimated from passive (* * *) and active(o o o) experiments. The fit to data with the model is shown by the solid (passive) and dashed (active) curves. 21 start Parameters: energy, etc Homeostatic values: CI, mass turnover, mass fraction, stresses, hh, rh t=t+∆t P, Q Iteration1=Iteration1+1; update stresses Iteration2=Iteration2+1; rold=r; λ2=r/rh Compute: әw/әλ2 , Tact fun(r) = әw/әλ2 + Tact - rP r=rold - fun(r )/dfun(r )/dr error2=|1-r/rold| Yes error2 > Tol Iteration2 Tol Iteration1 Tol and Iteration 12. Bishop, J. E., S. Rhodes, G. J. Laurent, R. B. Low, and W. S. Stirewalt. Increased collagen synthesis and decreased collagen degradation in right ventricular hypertrophy induced by pressure overload. Cardiovasc. Res. 28:1581–1585, 1994. 13. Bishop, S., R. Dech, T. Baker, M. Butz, K. Aravinthan, and J. P. Neary. Parasympathetic baroreflexes and heart rate variability during acute stage of sport concussion recovery. Brain Inj. 31:247–259, 2017. 66 14. Bonyhay, I., G. Jokkel, and M. Kollai. 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